Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               88-358
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               88-406
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               303, 170
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 10
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 172
               

               Conread position:
               89-256
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               89-292
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               89-302
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               89-340
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-370
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               89-388
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               89-415
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 75
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               89-418
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               226, 77
               

               Conread position:
               89-454
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 17
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 228
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 63
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 101
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 74
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               60, 174
               

               Conread position:
               91-309
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 59
               

               Conread position:
               92-321
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               165, 81
               

               Conread position:
               92-330
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               92-397
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               92-416
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 173
               

               Conread position:
               92-472
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 173
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 54
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 86
               

               Conread position:
               94-378
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               70, 85
               

               Conread position:
               95-343
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               95-412
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               91, 70
               

               Conread position:
               95-417
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               95-425
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               224, 108
               

               Conread position:
               95-427
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               61, 67
               

               Conread position:
               95-464
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               95-474
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 115
               

               Conread position:
               97-454
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 88
               

               Conread position:
               99-347
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 85
               

               Conread position:
               99-378
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               101-420
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               102-416
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 156
               

               Conread position:
               106-401
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               112-417
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               260, 55
               

               Conread position:
               112-473
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               114-378
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               115-339
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 145
               

               Conread position:
               140-340
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               152-453
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               178-417
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               186-473
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               247-420
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.