Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               45-304
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               88-309
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               88-416
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               88-446
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               88-463
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 73
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 85
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               89-258
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               89-307
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               89-328
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               104, 111
               

               Conread position:
               89-331
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               89-341
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               89-345
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               161, 84
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               74, 86
               

               Conread position:
               89-371
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               75, 86
               

               Conread position:
               89-386
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               89-388
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               89-388
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               89-398
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               181, 77
               

               Conread position:
               89-402
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 107
               

               Conread position:
               89-404
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               263, 77
               

               Conread position:
               89-406
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               230, 74
               

               Conread position:
               89-409
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 156
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               91, 116
               

               Conread position:
               89-464
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 74
               

               Conread position:
               89-468
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 169
               

               Conread position:
               89-468
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 76
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 71
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 74
               

               Conread position:
               89-471
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-472
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 89
               

               Conread position:
               89-472
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 85
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 93
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 98
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 98
               

               Conread position:
               91-308
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               92-329
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               92-347
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               73, 169
               

               Conread position:
               92-347
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               92-369
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               92-416
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 74
               

               Conread position:
               92-417
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 198
               

               Conread position:
               92-474
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 126
               

               Conread position:
               95-291
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               95-344
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               95-385
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 166
               

               Conread position:
               95-406
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               95-414
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 89
               

               Conread position:
               95-416
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               135, 79
               

               Conread position:
               95-426
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               157, 71
               

               Conread position:
               95-428
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               236, 72
               

               Conread position:
               95-446
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 157
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 110
               

               Conread position:
               95-482
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 71
               

               Conread position:
               96-284
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               96-328
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               54, 95
               

               Conread position:
               96-332
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               223, 70
               

               Conread position:
               97-383
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               97-473
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               100-383
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               100-404
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               217, 64
               

               Conread position:
               112-387
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               112-473
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               115-281
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               80, 61
               

               Conread position:
               115-392
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 51
               

               Conread position:
               119-473
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               45, 146
               

               Conread position:
               125-473
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               156-435
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               160-389
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               210, 23
               

               Conread position:
               178-473
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               179-393
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               188-402
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               212, 72
               

               Conread position:
               190-473
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               195-406
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               195-452
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               195-473
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               200-402
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               228-473
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               230-473
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               248-473
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               249-473
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               66, 0
               
Show alignments to all cow chromosomes.