Cow genome map
Conread name: | Thy1-THY010121F06 |
Conread position: | 45-304 |
Cow position: | chr21:8527324-8527571 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 150 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 88-309 |
Cow position: | chr21:26245031-26244824 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 88-416 |
Cow position: | chr21:27521221-27521526 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 230 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 6, 54 |
Conread position: | 88-446 |
Cow position: | chr21:41878588-41878245 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 246 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 88-463 |
Cow position: | chr21:40786796-40786422 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 73 |
Conread position: | 88-473 |
Cow position: | chr21:19766971-19766596 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 85 |
Conread position: | 88-473 |
Cow position: | chr21:44671861-44671495 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 89-258 |
Cow position: | chr21:28919407-28919575 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 120 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 89-307 |
Cow position: | chr21:17009097-17008884 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 89-328 |
Cow position: | chr21:46551987-46552214 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 170 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 104, 111 |
Conread position: | 89-331 |
Cow position: | chr21:25628794-25629029 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 171 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 89-341 |
Cow position: | chr21:20153072-20152820 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 185 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 75, 88 |
Conread position: | 89-345 |
Cow position: | chr21:10538139-10538394 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 176 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 161, 84 |
Conread position: | 89-347 |
Cow position: | chr21:29978644-29978896 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 186 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 74, 86 |
Conread position: | 89-371 |
Cow position: | chr21:13840443-13840166 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 197 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 75, 86 |
Conread position: | 89-386 |
Cow position: | chr21:22193983-22194282 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 215 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 32, 49 |
Conread position: | 89-388 |
Cow position: | chr21:32339624-32339910 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 213 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 89-388 |
Cow position: | chr21:32455020-32454728 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 202 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 31, 44 |
Conread position: | 89-398 |
Cow position: | chr21:46144075-46143760 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 224 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 181, 77 |
Conread position: | 89-402 |
Cow position: | chr21:37706299-37706594 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 218 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 75, 107 |
Conread position: | 89-404 |
Cow position: | chr21:14452350-14452041 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 231 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 263, 77 |
Conread position: | 89-406 |
Cow position: | chr21:3763626-3763928 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 224 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 230, 74 |
Conread position: | 89-409 |
Cow position: | chr21:42841481-42841785 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 213 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 75, 156 |
Conread position: | 89-417 |
Cow position: | chr21:41579872-41579549 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 231 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 91, 116 |
Conread position: | 89-464 |
Cow position: | chr21:23321962-23322330 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 74 |
Conread position: | 89-468 |
Cow position: | chr21:9416367-9415989 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 169 |
Conread position: | 89-468 |
Cow position: | chr21:18289779-18289410 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 76 |
Conread position: | 89-469 |
Cow position: | chr21:4281759-4282118 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 374, 71 |
Conread position: | 89-469 |
Cow position: | chr21:18568523-18568903 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 74 |
Conread position: | 89-471 |
Cow position: | chr21:6834165-6833796 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 89-472 |
Cow position: | chr21:30231578-30231957 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 89 |
Conread position: | 89-472 |
Cow position: | chr21:30606971-30607360 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 85 |
Conread position: | 89-473 |
Cow position: | chr21:5153737-5153359 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 93 |
Conread position: | 89-473 |
Cow position: | chr21:10727393-10727023 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 89-473 |
Cow position: | chr21:13034922-13035307 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 150 |
Conread position: | 89-473 |
Cow position: | chr21:13048077-13048454 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 98 |
Conread position: | 89-473 |
Cow position: | chr21:15584303-15584657 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 89-473 |
Cow position: | chr21:20160792-20160426 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 89-473 |
Cow position: | chr21:25127720-25127352 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 98 |
Conread position: | 91-308 |
Cow position: | chr21:8206886-8206674 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 158 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 85, 73 |
Conread position: | 92-329 |
Cow position: | chr21:18155453-18155689 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 162 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 92-347 |
Cow position: | chr21:12461854-12462104 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 186 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 73, 169 |
Conread position: | 92-347 |
Cow position: | chr21:17875080-17875329 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 176 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 92-369 |
Cow position: | chr21:24642633-24642364 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 199 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 92-416 |
Cow position: | chr21:41621238-41620918 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 229, 74 |
Conread position: | 92-417 |
Cow position: | chr21:34739957-34739647 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 215 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 136, 0 |
Conread position: | 92-473 |
Cow position: | chr21:7564194-7564580 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 198 |
Conread position: | 92-474 |
Cow position: | chr21:20044651-20045026 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 126 |
Conread position: | 95-291 |
Cow position: | chr21:30256159-30256350 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 135 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 95-344 |
Cow position: | chr21:34151695-34151450 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 177 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 69, 15 |
Conread position: | 95-385 |
Cow position: | chr21:19936810-19937103 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 207 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 71, 166 |
Conread position: | 95-406 |
Cow position: | chr21:10118669-10118362 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 213 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 68, 50 |
Conread position: | 95-414 |
Cow position: | chr21:23586992-23586677 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 89 |
Conread position: | 95-416 |
Cow position: | chr21:3818319-3818015 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 221 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 135, 79 |
Conread position: | 95-426 |
Cow position: | chr21:45473648-45473969 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 234 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 157, 71 |
Conread position: | 95-428 |
Cow position: | chr21:6624267-6623928 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 235 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 236, 72 |
Conread position: | 95-446 |
Cow position: | chr21:27124011-27124359 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 157 |
Conread position: | 95-473 |
Cow position: | chr21:27863403-27863777 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 110 |
Conread position: | 95-482 |
Cow position: | chr21:24222427-24222808 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 71 |
Conread position: | 96-284 |
Cow position: | chr21:40432554-40432375 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 135 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 96-328 |
Cow position: | chr21:6017734-6017498 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 158 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 54, 95 |
Conread position: | 96-332 |
Cow position: | chr21:23980073-23980305 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 169 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 223, 70 |
Conread position: | 97-383 |
Cow position: | chr21:10001182-10000912 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 212 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 68, 13 |
Conread position: | 97-473 |
Cow position: | chr21:3585260-3585614 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 100-383 |
Cow position: | chr21:45439131-45439419 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 42 |
Conread position: | 100-404 |
Cow position: | chr21:47764012-47764301 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 209 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 217, 64 |
Conread position: | 112-387 |
Cow position: | chr21:28989703-28989443 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 112-473 |
Cow position: | chr21:39888656-39889002 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 115-281 |
Cow position: | chr21:1511383-1511220 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 121 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 80, 61 |
Conread position: | 115-392 |
Cow position: | chr21:18790472-18790733 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 196 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 115-473 |
Cow position: | chr21:6764610-6764960 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 63 |
Conread position: | 115-473 |
Cow position: | chr21:33563098-33562756 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 51 |
Conread position: | 119-473 |
Cow position: | chr21:13898274-13897935 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 247 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 45, 146 |
Conread position: | 125-473 |
Cow position: | chr21:28617671-28617344 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 237 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 156-435 |
Cow position: | chr21:28626291-28626021 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 204 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 160-389 |
Cow position: | chr21:10608406-10608630 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 161 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 210, 23 |
Conread position: | 178-473 |
Cow position: | chr21:11706716-11707008 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 0 |
Conread position: | 179-393 |
Cow position: | chr21:29979731-29979934 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 188-402 |
Cow position: | chr21:9998698-9998908 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 212, 72 |
Conread position: | 190-473 |
Cow position: | chr21:12366399-12366129 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 195-406 |
Cow position: | chr21:13850053-13850262 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 195-452 |
Cow position: | chr21:1483503-1483255 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 195-473 |
Cow position: | chr21:4080371-4080096 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 200-402 |
Cow position: | chr21:4268883-4268686 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 150 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 228-473 |
Cow position: | chr21:34254300-34254538 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 180 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 230-473 |
Cow position: | chr21:30626202-30626441 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 248-473 |
Cow position: | chr21:5595624-5595406 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 176 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 249-473 |
Cow position: | chr21:46777014-46777231 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 167 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.