Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               82-473
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               82, 92
               

               Conread position:
               88-446
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 170
               

               Conread position:
               88-452
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 98
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               130, 18
               

               Conread position:
               89-306
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               89-312
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               163, 39
               

               Conread position:
               89-318
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               76, 109
               

               Conread position:
               89-371
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 96
               

               Conread position:
               89-386
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-386
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               89-398
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               89-403
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               129, 86
               

               Conread position:
               89-406
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               243, 17
               

               Conread position:
               89-412
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 77
               

               Conread position:
               89-412
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 93
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               80, 88
               

               Conread position:
               89-419
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               77, 128
               

               Conread position:
               89-420
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               129, 12
               

               Conread position:
               89-429
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               89-434
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               89-435
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               89-463
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               89-468
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 77
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 37
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 51
               

               Conread position:
               89-472
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 176
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 170
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 91
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 259
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 98
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 78
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 101
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               227, 70
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               89-489
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 88
               

               Conread position:
               92-399
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               92-407
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               92-409
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               92-417
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               92-446
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               92-469
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 86
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 95
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 92
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 118
               

               Conread position:
               94-427
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 83
               

               Conread position:
               95-342
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 215
               

               Conread position:
               95-402
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               205, 69
               

               Conread position:
               95-469
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               95-471
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 83
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 69
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               164, 45
               

               Conread position:
               96-416
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               286, 69
               

               Conread position:
               97-385
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               229, 66
               

               Conread position:
               98-473
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               99-314
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               100-346
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               100-404
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               272, 66
               

               Conread position:
               101-391
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               101-416
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               102-473
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 58
               

               Conread position:
               104-280
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               112-412
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               75, 52
               

               Conread position:
               112-473
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               112-473
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               114-473
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 37
               

               Conread position:
               130-439
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               129, 35
               

               Conread position:
               134-473
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 169
               

               Conread position:
               155-347
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               186-378
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               186-473
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               194-473
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               196-473
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               206-386
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 147
               

               Conread position:
               213-406
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               243-473
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.