Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               61-312
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               87-473
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               88-321
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 79
               

               Conread position:
               88-415
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               88-417
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 177
               

               Conread position:
               89-284
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 63
               

               Conread position:
               89-285
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 89
               

               Conread position:
               89-315
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-342
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 71
               

               Conread position:
               89-342
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               89-346
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               75, 115
               

               Conread position:
               89-370
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               89-385
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               89-388
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               76, 167
               

               Conread position:
               89-401
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               89-412
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               89-418
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               165, 87
               

               Conread position:
               89-445
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               89-452
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 84
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 89
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 177
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 60
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 85
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 221
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 225
               

               Conread position:
               91-469
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               91-482
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 70
               

               Conread position:
               92-296
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               174, 18
               

               Conread position:
               92-301
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               92-308
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 130
               

               Conread position:
               92-346
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               92-393
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               92-398
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 68
               

               Conread position:
               92-469
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               95-306
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               95-314
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               138, 69
               

               Conread position:
               95-403
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               95-423
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 71
               

               Conread position:
               95-469
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               96-363
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               97-304
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               67, 81
               

               Conread position:
               106-473
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               350, 154
               

               Conread position:
               107-315
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               107-341
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               112-416
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               115-347
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               115-406
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               115-469
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               130-432
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 150
               

               Conread position:
               168-473
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               177-459
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               178-432
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               181-401
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               138, 68
               

               Conread position:
               183-473
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               
Show alignments to all cow chromosomes.