Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               86-346
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               64, 150
               

               Conread position:
               88-438
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 73
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               88-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 88
               

               Conread position:
               89-302
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 34
               

               Conread position:
               89-303
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               158, 77
               

               Conread position:
               89-304
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               74, 86
               

               Conread position:
               89-306
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               89-332
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               76, 107
               

               Conread position:
               89-341
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               186, 85
               

               Conread position:
               89-363
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 223
               

               Conread position:
               89-409
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               89-412
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 145
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               89-444
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               353, 77
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 74
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 77
               

               Conread position:
               89-472
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 154
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 75
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 17
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 72
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 95
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 171
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               325, 64
               

               Conread position:
               92-344
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               92-347
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               105, 81
               

               Conread position:
               92-358
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               92-465
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 14
               

               Conread position:
               92-472
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 172
               

               Conread position:
               93-339
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               94-469
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               169, 69
               

               Conread position:
               95-308
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               82, 198
               

               Conread position:
               95-338
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 163
               

               Conread position:
               96-326
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               96-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 83
               

               Conread position:
               97-469
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 80
               

               Conread position:
               98-388
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               100-473
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 124
               

               Conread position:
               107-469
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 60
               

               Conread position:
               115-458
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               118-454
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               119-469
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               134-473
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               177-473
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               178-473
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               178-473
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 136
               

               Conread position:
               190-406
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               196-473
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               197-393
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               247-473
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               137, 50
               
Show alignments to all cow chromosomes.