Cow genome map
| Conread name: | Thy1-THY010121F06 |
| Conread position: | 72-484 |
| Cow position: | chr26:33045165-33044768 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 17 |
| Conread position: | 88-413 |
| Cow position: | chr26:34314761-34314432 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 201, 98 |
| Conread position: | 89-298 |
| Cow position: | chr26:33074428-33074634 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 89-299 |
| Cow position: | chr26:14905739-14905946 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 172 |
| Conread position: | 89-304 |
| Cow position: | chr26:33253247-33253461 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 89-337 |
| Cow position: | chr26:22249408-22249652 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 157, 87 |
| Conread position: | 89-344 |
| Cow position: | chr26:22354482-22354236 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 89-345 |
| Cow position: | chr26:34060402-34060155 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 89-346 |
| Cow position: | chr26:35449132-35448884 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 89, 164 |
| Conread position: | 89-360 |
| Cow position: | chr26:4167284-4167548 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 89-380 |
| Cow position: | chr26:10764281-10764007 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 89-387 |
| Cow position: | chr26:23000971-23001264 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 89-388 |
| Cow position: | chr26:6005985-6006266 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 208, 114 |
| Conread position: | 89-396 |
| Cow position: | chr26:19774230-19774531 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 89-402 |
| Cow position: | chr26:6794214-6793906 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 84 |
| Conread position: | 89-412 |
| Cow position: | chr26:33160433-33160741 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 89-441 |
| Cow position: | chr26:4363369-4363032 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 77, 111 |
| Conread position: | 89-453 |
| Cow position: | chr26:16550053-16549698 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 84 |
| Conread position: | 89-469 |
| Cow position: | chr26:3706861-3706502 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 89-473 |
| Cow position: | chr26:6714233-6714588 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 89-473 |
| Cow position: | chr26:32683185-32682809 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 89-506 |
| Cow position: | chr26:19459762-19459336 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 148 |
| Conread position: | 90-405 |
| Cow position: | chr26:33096490-33096803 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 92-384 |
| Cow position: | chr26:33857128-33857414 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 284, 82 |
| Conread position: | 92-397 |
| Cow position: | chr26:26200903-26200616 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 92-416 |
| Cow position: | chr26:4854611-4854289 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 74, 220 |
| Conread position: | 92-469 |
| Cow position: | chr26:5102758-5103123 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 92-469 |
| Cow position: | chr26:32601416-32601050 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 58 |
| Conread position: | 92-473 |
| Cow position: | chr26:8353035-8352654 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 156 |
| Conread position: | 93-304 |
| Cow position: | chr26:31633793-31633585 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 94-469 |
| Cow position: | chr26:31701876-31701514 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 95-321 |
| Cow position: | chr26:14578390-14578168 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 95-344 |
| Cow position: | chr26:30568600-30568833 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 99-473 |
| Cow position: | chr26:4585151-4585515 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 100-388 |
| Cow position: | chr26:30254575-30254854 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 142, 73 |
| Conread position: | 100-465 |
| Cow position: | chr26:16166857-16167207 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 101-473 |
| Cow position: | chr26:8699990-8700355 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 115-444 |
| Cow position: | chr26:11134644-11134972 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 130-406 |
| Cow position: | chr26:9850069-9850331 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 130-406 |
| Cow position: | chr26:9853579-9853841 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 131-406 |
| Cow position: | chr26:32688463-32688191 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 183-311 |
| Cow position: | chr26:20855370-20855243 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 190-406 |
| Cow position: | chr26:30808012-30807796 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 129, 158 |
| Conread position: | 224-468 |
| Cow position: | chr26:29576326-29576090 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 247-472 |
| Cow position: | chr26:14395319-14395539 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 249-473 |
| Cow position: | chr26:22180418-22180200 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.