Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 83-473
Cow position: chr27:10992253-10992645 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 11

Conread position: 86-410
Cow position: chr27:27641111-27640777 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 273

Conread position: 87-507
Cow position: chr27:26920009-26919602 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 148

Conread position: 88-309
Cow position: chr27:27442266-27442051 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 78

Conread position: 89-343
Cow position: chr27:7649678-7649433 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 85

Conread position: 89-347
Cow position: chr27:7731353-7731095 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 218

Conread position: 89-347
Cow position: chr27:11480732-11480476 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 174

Conread position: 89-347
Cow position: chr27:22513773-22513521 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 85

Conread position: 89-366
Cow position: chr27:13841273-13841548 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 75

Conread position: 89-387
Cow position: chr27:18739281-18739580 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 65, 232

Conread position: 89-404
Cow position: chr27:22454871-22454570 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 197, 85

Conread position: 89-414
Cow position: chr27:30354440-30354126 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 0

Conread position: 89-417
Cow position: chr27:19660836-19661165 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 246

Conread position: 89-427
Cow position: chr27:7935253-7934931 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 89

Conread position: 89-432
Cow position: chr27:6499965-6500302 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 89-435
Cow position: chr27:10979767-10980104 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 77

Conread position: 89-461
Cow position: chr27:6550368-6550717 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 89-467
Cow position: chr27:11435418-11435060 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 77

Conread position: 89-469
Cow position: chr27:23128364-23128728 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 39

Conread position: 89-472
Cow position: chr27:26413350-26412981 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 89-473
Cow position: chr27:15871065-15871440 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 67, 103

Conread position: 89-473
Cow position: chr27:29831793-29831410 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 73

Conread position: 90-440
Cow position: chr27:11081106-11081441 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 92-304
Cow position: chr27:30672651-30672449 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 92-322
Cow position: chr27:715408-715635 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 50

Conread position: 92-363
Cow position: chr27:29184930-29184674 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 92-472
Cow position: chr27:1353490-1353872 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 72, 170

Conread position: 92-473
Cow position: chr27:16786736-16787110 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 81

Conread position: 92-473
Cow position: chr27:21408656-21408270 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 74

Conread position: 92-473
Cow position: chr27:24999833-24999458 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 95-329
Cow position: chr27:20918801-20919028 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 30

Conread position: 95-473
Cow position: chr27:26428222-26427850 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 95-473
Cow position: chr27:27064529-27064166 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 96-472
Cow position: chr27:4386150-4385788 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 69

Conread position: 98-473
Cow position: chr27:21978221-21977859 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 99-385
Cow position: chr27:20037202-20036938 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 78

Conread position: 99-468
Cow position: chr27:30582648-30583010 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 163

Conread position: 100-473
Cow position: chr27:15925261-15925613 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 356, 71

Conread position: 112-410
Cow position: chr27:18558284-18558579 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 66

Conread position: 115-337
Cow position: chr27:7538147-7537929 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 142, 25

Conread position: 115-393
Cow position: chr27:21569910-21569645 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 115-417
Cow position: chr27:6522974-6523268 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 51

Conread position: 115-473
Cow position: chr27:23882442-23882087 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 13

Conread position: 117-410
Cow position: chr27:26135069-26135375 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 49

Conread position: 119-314
Cow position: chr27:20570053-20570246 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 56

Conread position: 121-472
Cow position: chr27:18543928-18544275 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 135-446
Cow position: chr27:23929925-23930215 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 183-416
Cow position: chr27:13638998-13638771 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 195-458
Cow position: chr27:2930591-2930332 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 104

Show alignments to all cow chromosomes.