Cow genome map
Conread name: | Thy1-THY010121F06 |
Conread position: | 83-473 |
Cow position: | chr27:10992253-10992645 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 11 |
Conread position: | 86-410 |
Cow position: | chr27:27641111-27640777 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 273 |
Conread position: | 87-507 |
Cow position: | chr27:26920009-26919602 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 148 |
Conread position: | 88-309 |
Cow position: | chr27:27442266-27442051 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 150 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 89, 78 |
Conread position: | 89-343 |
Cow position: | chr27:7649678-7649433 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 178 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 27, 85 |
Conread position: | 89-347 |
Cow position: | chr27:7731353-7731095 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 174 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 61, 218 |
Conread position: | 89-347 |
Cow position: | chr27:11480732-11480476 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 176 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 76, 174 |
Conread position: | 89-347 |
Cow position: | chr27:22513773-22513521 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 183 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 134, 85 |
Conread position: | 89-366 |
Cow position: | chr27:13841273-13841548 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 202 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 67, 75 |
Conread position: | 89-387 |
Cow position: | chr27:18739281-18739580 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 214 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 65, 232 |
Conread position: | 89-404 |
Cow position: | chr27:22454871-22454570 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 221 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 197, 85 |
Conread position: | 89-414 |
Cow position: | chr27:30354440-30354126 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 224 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 89-417 |
Cow position: | chr27:19660836-19661165 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 246 |
Conread position: | 89-427 |
Cow position: | chr27:7935253-7934931 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 220 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 9, 89 |
Conread position: | 89-432 |
Cow position: | chr27:6499965-6500302 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 89-435 |
Cow position: | chr27:10979767-10980104 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 77 |
Conread position: | 89-461 |
Cow position: | chr27:6550368-6550717 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 89-467 |
Cow position: | chr27:11435418-11435060 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 77 |
Conread position: | 89-469 |
Cow position: | chr27:23128364-23128728 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 39 |
Conread position: | 89-472 |
Cow position: | chr27:26413350-26412981 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 89-473 |
Cow position: | chr27:15871065-15871440 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 263 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 67, 103 |
Conread position: | 89-473 |
Cow position: | chr27:29831793-29831410 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 73 |
Conread position: | 90-440 |
Cow position: | chr27:11081106-11081441 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 238 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 92-304 |
Cow position: | chr27:30672651-30672449 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 146 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 92-322 |
Cow position: | chr27:715408-715635 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 162 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 72, 50 |
Conread position: | 92-363 |
Cow position: | chr27:29184930-29184674 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 183 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 92-472 |
Cow position: | chr27:1353490-1353872 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 275 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 72, 170 |
Conread position: | 92-473 |
Cow position: | chr27:16786736-16787110 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 81 |
Conread position: | 92-473 |
Cow position: | chr27:21408656-21408270 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 74 |
Conread position: | 92-473 |
Cow position: | chr27:24999833-24999458 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 95-329 |
Cow position: | chr27:20918801-20919028 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 80, 30 |
Conread position: | 95-473 |
Cow position: | chr27:26428222-26427850 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 95-473 |
Cow position: | chr27:27064529-27064166 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 96-472 |
Cow position: | chr27:4386150-4385788 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 69 |
Conread position: | 98-473 |
Cow position: | chr27:21978221-21977859 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 99-385 |
Cow position: | chr27:20037202-20036938 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 194 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 65, 78 |
Conread position: | 99-468 |
Cow position: | chr27:30582648-30583010 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 163 |
Conread position: | 100-473 |
Cow position: | chr27:15925261-15925613 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 249 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 356, 71 |
Conread position: | 112-410 |
Cow position: | chr27:18558284-18558579 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 211 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 53, 66 |
Conread position: | 115-337 |
Cow position: | chr27:7538147-7537929 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 164 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 142, 25 |
Conread position: | 115-393 |
Cow position: | chr27:21569910-21569645 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 194 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 115-417 |
Cow position: | chr27:6522974-6523268 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 51 |
Conread position: | 115-473 |
Cow position: | chr27:23882442-23882087 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 13 |
Conread position: | 117-410 |
Cow position: | chr27:26135069-26135375 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 217 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 60, 49 |
Conread position: | 119-314 |
Cow position: | chr27:20570053-20570246 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 136 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 12, 56 |
Conread position: | 121-472 |
Cow position: | chr27:18543928-18544275 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 63 |
Conread position: | 135-446 |
Cow position: | chr27:23929925-23930215 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 183-416 |
Cow position: | chr27:13638998-13638771 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 173 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 195-458 |
Cow position: | chr27:2930591-2930332 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 104 |
Show alignments to all cow chromosomes.