Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               83-473
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               86-410
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 273
               

               Conread position:
               87-507
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 148
               

               Conread position:
               88-309
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               89, 78
               

               Conread position:
               89-343
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 85
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               61, 218
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 174
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               134, 85
               

               Conread position:
               89-366
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 75
               

               Conread position:
               89-387
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               65, 232
               

               Conread position:
               89-404
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               197, 85
               

               Conread position:
               89-414
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 246
               

               Conread position:
               89-427
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               89-432
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-435
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 77
               

               Conread position:
               89-461
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               89-467
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 77
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 39
               

               Conread position:
               89-472
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               67, 103
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 73
               

               Conread position:
               90-440
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               92-304
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               92-322
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               72, 50
               

               Conread position:
               92-363
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               92-472
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               72, 170
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 81
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 74
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               95-329
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               96-472
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 69
               

               Conread position:
               98-473
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               99-385
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               99-468
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 163
               

               Conread position:
               100-473
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               356, 71
               

               Conread position:
               112-410
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               115-337
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               115-393
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               115-417
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 51
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 13
               

               Conread position:
               117-410
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               119-314
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               121-472
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               135-446
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               183-416
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               195-458
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 104
               
Show alignments to all cow chromosomes.