Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               88-385
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               89-285
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 139
               

               Conread position:
               89-309
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               89-361
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               89-366
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-380
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               89-400
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               89-407
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-415
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               201, 170
               

               Conread position:
               89-416
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               311, 74
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               75, 201
               

               Conread position:
               89-422
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 96
               

               Conread position:
               89-428
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 86
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 70
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 173
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 88
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 77
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               91-473
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               92-312
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               92-347
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 87
               

               Conread position:
               92-367
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               64, 97
               

               Conread position:
               92-392
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 92
               

               Conread position:
               92-406
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 107
               

               Conread position:
               92-472
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 118
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 220
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 84
               

               Conread position:
               95-347
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               96-314
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               59, 82
               

               Conread position:
               96-333
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               97-447
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 112
               

               Conread position:
               97-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               59, 64
               

               Conread position:
               98-365
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 170
               

               Conread position:
               100-469
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 122
               

               Conread position:
               101-347
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 94
               

               Conread position:
               112-473
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 52
               

               Conread position:
               112-473
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 92
               

               Conread position:
               123-452
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               163-469
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 100
               

               Conread position:
               164-462
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               16, 152
               

               Conread position:
               178-383
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               178-410
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               178-473
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               180-473
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               186-347
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               186-464
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 75
               

               Conread position:
               190-345
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               47, 136
               

               Conread position:
               195-414
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               217-417
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               253-393
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.