Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 73-417
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 103

Conread position: 83-411
Cow position:
Alignm length: 330
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 218, 81

Conread position: 88-269
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 170, 143

Conread position: 88-473
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 89-282
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 107

Conread position: 89-282
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 86

Conread position: 89-285
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 77

Conread position: 89-290
Cow position:
Alignm length: 203
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 176

Conread position: 89-299
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 98

Conread position: 89-308
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 89-313
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 194

Conread position: 89-314
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 89-329
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 89-332
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 89-338
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 89-343
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 89-360
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 89-368
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 89-371
Cow position:
Alignm length: 289
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 125

Conread position: 89-398
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 246, 85

Conread position: 89-400
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 101

Conread position: 89-400
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 65, 72

Conread position: 89-404
Cow position:
Alignm length: 320
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 282, 75

Conread position: 89-406
Cow position:
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 89-408
Cow position:
Alignm length: 328
Alignm identity: 228
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 170, 77

Conread position: 89-410
Cow position:
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 115

Conread position: 89-412
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 89-417
Cow position:
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 89-417
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 130, 84

Conread position: 89-417
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 89-417
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 165

Conread position: 89-417
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 266, 69

Conread position: 89-419
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 140

Conread position: 89-429
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 171, 0

Conread position: 89-432
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 89-435
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 78

Conread position: 89-439
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 71

Conread position: 89-439
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 206, 105

Conread position: 89-442
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 89-446
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 85

Conread position: 89-446
Cow position:
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 89-446
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 89-446
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 177

Conread position: 89-458
Cow position:
Alignm length: 375
Alignm identity: 256
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 75, 86

Conread position: 89-461
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 84

Conread position: 89-467
Cow position:
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 89-469
Cow position:
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 89-469
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 94

Conread position: 89-469
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 172

Conread position: 89-469
Cow position:
Alignm length: 386
Alignm identity: 263
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 100, 77

Conread position: 89-472
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 89-472
Cow position:
Alignm length: 390
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 77

Conread position: 89-472
Cow position:
Alignm length: 385
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 14

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 89-473
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 169, 75

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 83

Conread position: 89-473
Cow position:
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 89

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 71

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 259

Conread position: 89-473
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 77, 95

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 94

Conread position: 89-473
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 5

Conread position: 89-473
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 322, 75

Conread position: 89-473
Cow position:
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 77

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 90-347
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 173, 228

Conread position: 91-365
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 91-467
Cow position:
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 82

Conread position: 92-339
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 171

Conread position: 92-343
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 92-347
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 104

Conread position: 92-386
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 92-446
Cow position:
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 83

Conread position: 92-467
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 27

Conread position: 92-473
Cow position:
Alignm length: 390
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 168

Conread position: 92-474
Cow position:
Alignm length: 383
Alignm identity: 265
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 74, 0

Conread position: 92-474
Cow position:
Alignm length: 389
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 127, 81

Conread position: 94-404
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 261

Conread position: 95-298
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 95-308
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 95-318
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 95-361
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 71, 0

Conread position: 95-467
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 138

Conread position: 95-469
Cow position:
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 95-471
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 71

Conread position: 95-472
Cow position:
Alignm length: 388
Alignm identity: 270
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 316, 43

Conread position: 95-473
Cow position:
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 95-473
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 71

Conread position: 95-473
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 95-474
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 97-462
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 67

Conread position: 97-468
Cow position:
Alignm length: 383
Alignm identity: 259
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 286, 84

Conread position: 98-306
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 80

Conread position: 98-414
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 132, 205

Conread position: 100-473
Cow position:
Alignm length: 374
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 112-370
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 148, 0

Conread position: 112-417
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 227, 62

Conread position: 112-428
Cow position:
Alignm length: 322
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 75

Conread position: 112-473
Cow position:
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 53

Conread position: 112-474
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 53

Conread position: 115-387
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 264, 62

Conread position: 115-434
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 79

Conread position: 115-473
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 130-473
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 133-383
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 134-430
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 123, 42

Conread position: 160-472
Cow position:
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 6

Conread position: 178-473
Cow position:
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 8

Conread position: 178-473
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 178-473
Cow position:
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 183-307
Cow position:
Alignm length: 125
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 183-473
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 183-473
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 165, 128

Conread position: 186-381
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 161, 0

Conread position: 186-473
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 190-471
Cow position:
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 190-473
Cow position:
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 64

Conread position: 195-471
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 197-416
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 0

Conread position: 204-473
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 223-420
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 235-473
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 247-417
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 252-473
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 252-473
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.