Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 75-469
Cow position:
Alignm length: 396
Alignm identity: 276
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 112, 13

Conread position: 86-416
Cow position:
Alignm length: 346
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 145, 79

Conread position: 87-482
Cow position:
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 108

Conread position: 88-314
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 70

Conread position: 88-325
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 76, 89

Conread position: 88-414
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 116

Conread position: 88-468
Cow position:
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 88-472
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 88-473
Cow position:
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 84

Conread position: 89-281
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 77, 17

Conread position: 89-285
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 89-285
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 168, 92

Conread position: 89-303
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 173, 0

Conread position: 89-303
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 31

Conread position: 89-304
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 89-318
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 89-323
Cow position:
Alignm length: 237
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 162

Conread position: 89-325
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 167, 77

Conread position: 89-339
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 163

Conread position: 89-346
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 108

Conread position: 89-386
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 221

Conread position: 89-397
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 87

Conread position: 89-406
Cow position:
Alignm length: 318
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 89-406
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 95

Conread position: 89-407
Cow position:
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 100

Conread position: 89-410
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 95

Conread position: 89-411
Cow position:
Alignm length: 324
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 75, 88

Conread position: 89-412
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 147

Conread position: 89-417
Cow position:
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 88

Conread position: 89-431
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 86

Conread position: 89-455
Cow position:
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 89-468
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 52

Conread position: 89-469
Cow position:
Alignm length: 383
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 95

Conread position: 89-469
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 85

Conread position: 89-470
Cow position:
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 98

Conread position: 89-472
Cow position:
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 89-473
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 89-473
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 77

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 89-473
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 67

Conread position: 89-474
Cow position:
Alignm length: 388
Alignm identity: 264
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 230, 77

Conread position: 90-385
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 75, 176

Conread position: 92-312
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 164, 72

Conread position: 92-312
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 92-347
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 164, 74

Conread position: 92-397
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 74

Conread position: 92-416
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 122, 81

Conread position: 92-469
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 193

Conread position: 92-473
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 74

Conread position: 92-473
Cow position:
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 18

Conread position: 94-298
Cow position:
Alignm length: 206
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 90

Conread position: 94-419
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 95-379
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 261, 91

Conread position: 95-414
Cow position:
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 95-462
Cow position:
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 70

Conread position: 95-469
Cow position:
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 79

Conread position: 95-470
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 95-473
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 84

Conread position: 96-417
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 68

Conread position: 96-464
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 68

Conread position: 97-347
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 77

Conread position: 97-473
Cow position:
Alignm length: 380
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 87

Conread position: 98-358
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 255

Conread position: 98-416
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 53

Conread position: 98-469
Cow position:
Alignm length: 372
Alignm identity: 248
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 139, 0

Conread position: 100-387
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 103-345
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 112, 60

Conread position: 107-473
Cow position:
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 20

Conread position: 107-474
Cow position:
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 59

Conread position: 111-315
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 112-346
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 135, 96

Conread position: 115-347
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 127

Conread position: 115-386
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 115-403
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 109

Conread position: 115-410
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 115-416
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 115-473
Cow position:
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 115-473
Cow position:
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 51

Conread position: 118-452
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 60

Conread position: 149-370
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 17

Conread position: 163-404
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 168-446
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 181

Conread position: 177-473
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 195, 10

Conread position: 177-484
Cow position:
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 83

Conread position: 178-344
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 178-469
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 178-473
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 186-386
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 186-427
Cow position:
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 187-368
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 188-425
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 54, 0

Conread position: 190-374
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 190-432
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 190-467
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 190-473
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 196-472
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 15, 92

Conread position: 213-473
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 215-473
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 101

Conread position: 217-462
Cow position:
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 217-473
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 228-400
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 248-413
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.