Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 83-400
Cow position: chr7:44986756-44986451 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 181

Conread position: 88-332
Cow position: chr7:9781629-9781871 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 78, 90

Conread position: 88-384
Cow position: chr7:5723798-5723506 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 100

Conread position: 88-435
Cow position: chr7:48721808-48722147 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 24

Conread position: 89-236
Cow position: chr7:33914065-33913918 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 89

Conread position: 89-309
Cow position: chr7:14524573-14524359 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 88

Conread position: 89-325
Cow position: chr7:21122165-21122393 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 230, 78

Conread position: 89-337
Cow position: chr7:2579143-2579389 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 88

Conread position: 89-347
Cow position: chr7:46051750-46051500 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 95

Conread position: 89-367
Cow position: chr7:61790258-61790529 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 74, 86

Conread position: 89-386
Cow position: chr7:52536159-52536443 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 117

Conread position: 89-387
Cow position: chr7:32079546-32079265 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 0

Conread position: 89-387
Cow position: chr7:51039526-51039238 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 53

Conread position: 89-393
Cow position: chr7:59075944-59075653 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 116

Conread position: 89-417
Cow position: chr7:37455412-37455098 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 133, 77

Conread position: 89-421
Cow position: chr7:54513311-54513649 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 78

Conread position: 89-424
Cow position: chr7:27132861-27133189 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 212
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 89-432
Cow position: chr7:41293652-41293988 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 75

Conread position: 89-438
Cow position: chr7:33386016-33385689 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 88, 0

Conread position: 89-454
Cow position: chr7:22624008-22624363 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 89-461
Cow position: chr7:53097685-53097331 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 99

Conread position: 89-464
Cow position: chr7:9136932-9136571 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 170

Conread position: 89-467
Cow position: chr7:18388305-18388670 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 98

Conread position: 89-469
Cow position: chr7:17757127-17756769 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 89-469
Cow position: chr7:64228798-64229176 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 106

Conread position: 89-472
Cow position: chr7:14005975-14005596 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 96

Conread position: 89-472
Cow position: chr7:46823764-46823401 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 78

Conread position: 89-473
Cow position: chr7:4418365-4418739 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 43

Conread position: 89-473
Cow position: chr7:13593862-13593495 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 21

Conread position: 89-473
Cow position: chr7:19466156-19466541 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 96

Conread position: 89-473
Cow position: chr7:23568642-23569020 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 30

Conread position: 89-473
Cow position: chr7:26485667-26485303 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 271
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 51

Conread position: 89-473
Cow position: chr7:28563296-28563660 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 89-473
Cow position: chr7:32316989-32316620 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 70

Conread position: 89-473
Cow position: chr7:39939830-39939459 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 98

Conread position: 89-473
Cow position: chr7:45158216-45157853 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 89-473
Cow position: chr7:45593133-45592760 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 77

Conread position: 89-473
Cow position: chr7:47547503-47547115 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 171

Conread position: 91-469
Cow position: chr7:19981754-19982110 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 167, 75

Conread position: 92-300
Cow position: chr7:53579300-53579504 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 92-388
Cow position: chr7:11011591-11011887 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 107

Conread position: 92-410
Cow position: chr7:1558825-1558519 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 92-454
Cow position: chr7:47931705-47932057 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 84

Conread position: 92-459
Cow position: chr7:9075143-9074794 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 81

Conread position: 92-473
Cow position: chr7:42429968-42429589 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 93

Conread position: 92-473
Cow position: chr7:44454189-44454545 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 92-473
Cow position: chr7:51019869-51019516 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 72

Conread position: 92-473
Cow position: chr7:66894448-66894820 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 74

Conread position: 93-473
Cow position: chr7:42222852-42223226 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 112

Conread position: 95-317
Cow position: chr7:6608318-6608089 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 95-386
Cow position: chr7:13963299-13963010 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 217

Conread position: 95-393
Cow position: chr7:43882169-43881878 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 92, 0

Conread position: 95-406
Cow position: chr7:16022383-16022089 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 95-417
Cow position: chr7:40405933-40405628 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 95-464
Cow position: chr7:32791789-32791419 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 95-469
Cow position: chr7:47775949-47775594 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 95-473
Cow position: chr7:53551852-53552220 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 71

Conread position: 95-473
Cow position: chr7:57258935-57259310 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 158

Conread position: 95-473
Cow position: chr7:59692161-59691796 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 84

Conread position: 96-406
Cow position: chr7:48406408-48406713 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 98-385
Cow position: chr7:37697886-37697612 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 66, 107

Conread position: 98-416
Cow position: chr7:37952264-37951958 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 99-473
Cow position: chr7:35286556-35286893 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 101-321
Cow position: chr7:37184441-37184234 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 74

Conread position: 101-390
Cow position: chr7:40303183-40303461 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 106-393
Cow position: chr7:41879412-41879702 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 164

Conread position: 112-406
Cow position: chr7:42894515-42894238 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 112-469
Cow position: chr7:11161315-11160972 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 115-451
Cow position: chr7:11066551-11066216 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 150

Conread position: 115-469
Cow position: chr7:40952790-40953140 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 146

Conread position: 115-469
Cow position: chr7:44589785-44590118 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 226, 50

Conread position: 115-473
Cow position: chr7:22357414-22357768 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 115-506
Cow position: chr7:4892932-4892551 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 64

Conread position: 117-464
Cow position: chr7:51072310-51071968 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 49

Conread position: 119-412
Cow position: chr7:40305507-40305781 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 264, 54

Conread position: 123-387
Cow position: chr7:12201868-12202110 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 138-404
Cow position: chr7:7142013-7142278 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 28, 48

Conread position: 165-473
Cow position: chr7:39401980-39401678 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 97

Conread position: 168-473
Cow position: chr7:35779467-35779170 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 178-473
Cow position: chr7:23664083-23664374 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 183-446
Cow position: chr7:28324640-28324382 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 183-450
Cow position: chr7:8812924-8813180 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 186-417
Cow position: chr7:22730209-22729981 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 151, 0

Conread position: 186-424
Cow position: chr7:3175950-3176179 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 28, 53

Conread position: 190-339
Cow position: chr7:47187527-47187379 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 13

Conread position: 190-473
Cow position: chr7:37569034-37568748 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 159

Conread position: 198-471
Cow position: chr7:25083682-25083415 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 217-345
Cow position: chr7:40099394-40099265 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 217-482
Cow position: chr7:64269015-64269271 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 247-473
Cow position: chr7:21296523-21296295 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 161, 84

Show alignments to all cow chromosomes.