Cow genome map


           Conread name:
           Thy1-THY010121F06
        

               Conread position:
               88-344
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               88-388
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               88-472
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               352, 6
               

               Conread position:
               89-303
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 98
               

               Conread position:
               89-304
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               89-308
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               77, 90
               

               Conread position:
               89-310
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 71
               

               Conread position:
               89-314
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               89-325
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               230, 77
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               87, 75
               

               Conread position:
               89-385
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               171, 76
               

               Conread position:
               89-386
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 91
               

               Conread position:
               89-387
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               89-400
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               89-403
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               89-404
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               80, 142
               

               Conread position:
               89-406
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 17
               

               Conread position:
               89-414
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               89-416
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 77
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 115
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               104, 47
               

               Conread position:
               89-417
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 70
               

               Conread position:
               89-422
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               89-425
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 56
               

               Conread position:
               89-434
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               89-454
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               89-461
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 17
               

               Conread position:
               89-463
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 77
               

               Conread position:
               89-467
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               89-469
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               76, 89
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 107
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 84
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               77, 118
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 148
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               89-473
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 88
               

               Conread position:
               89-478
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               89-484
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 77
               

               Conread position:
               91-473
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               92-315
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 169
               

               Conread position:
               92-386
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               167, 203
               

               Conread position:
               92-401
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               76, 181
               

               Conread position:
               92-417
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               30, 75
               

               Conread position:
               92-439
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               62, 83
               

               Conread position:
               92-473
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               95-343
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               95-347
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               95-387
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               95-403
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 185
               

               Conread position:
               95-409
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               71, 224
               

               Conread position:
               95-468
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 10
               

               Conread position:
               95-469
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 168
               

               Conread position:
               95-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               96-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 165
               

               Conread position:
               97-312
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               97-416
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               97-469
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 68
               

               Conread position:
               97-473
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 69
               

               Conread position:
               97-473
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               99-473
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               67, 104
               

               Conread position:
               101-386
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               86, 252
               

               Conread position:
               101-462
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               103-370
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               62, 74
               

               Conread position:
               107-366
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 77
               

               Conread position:
               112-321
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               115-293
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               115-411
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               147, 58
               

               Conread position:
               115-473
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               142-473
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 123
               

               Conread position:
               164-459
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               168-482
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               177-473
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               178-346
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               178-473
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               179-453
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               202, 132
               

               Conread position:
               187-473
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 160
               

               Conread position:
               190-357
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               190-473
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               195-386
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               222-473
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               226-345
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-417
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.