Cow genome map

Conread name: Thy1-THY010121F06

Conread position: 88-344
Cow position: chr8:20150494-20150744 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 88-388
Cow position: chr8:20926567-20926863 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 97

Conread position: 88-472
Cow position: chr8:22273926-22273549 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 6

Conread position: 89-303
Cow position: chr8:51694751-51694960 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 98

Conread position: 89-304
Cow position: chr8:935768-935560 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 89-308
Cow position: chr8:29149802-29150023 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 90

Conread position: 89-310
Cow position: chr8:53633160-53633384 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 71

Conread position: 89-314
Cow position: chr8:19011732-19011952 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 89-325
Cow position: chr8:21083228-21083459 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 230, 77

Conread position: 89-347
Cow position: chr8:10764927-10765198 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 87, 75

Conread position: 89-385
Cow position: chr8:8097204-8097493 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 171, 76

Conread position: 89-386
Cow position: chr8:59043035-59043326 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 91

Conread position: 89-387
Cow position: chr8:50310788-50311073 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 91

Conread position: 89-400
Cow position: chr8:51403021-51402730 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 89-403
Cow position: chr8:9315965-9315669 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 99

Conread position: 89-404
Cow position: chr8:46964798-46964473 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 142

Conread position: 89-406
Cow position: chr8:1024022-1023716 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 17

Conread position: 89-414
Cow position: chr8:47328405-47328091 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 89-416
Cow position: chr8:37571641-37571962 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 77

Conread position: 89-417
Cow position: chr8:1394294-1393975 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 115

Conread position: 89-417
Cow position: chr8:7149637-7149941 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 89-417
Cow position: chr8:20783201-20783536 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 104, 47

Conread position: 89-417
Cow position: chr8:48775882-48775560 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 70

Conread position: 89-422
Cow position: chr8:16487239-16487563 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 91

Conread position: 89-425
Cow position: chr8:31776254-31775920 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 56

Conread position: 89-434
Cow position: chr8:47664843-47665179 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 48

Conread position: 89-454
Cow position: chr8:19642531-19642178 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 89-461
Cow position: chr8:45781606-45781966 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 17

Conread position: 89-463
Cow position: chr8:18730510-18730135 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 77

Conread position: 89-467
Cow position: chr8:9942462-9942830 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 89-469
Cow position: chr8:1187984-1187630 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 76, 89

Conread position: 89-473
Cow position: chr8:537850-538224 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 107

Conread position: 89-473
Cow position: chr8:3446034-3446386 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 41, 89

Conread position: 89-473
Cow position: chr8:10297674-10298047 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 89-473
Cow position: chr8:18049657-18049292 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 89-473
Cow position: chr8:21222255-21221890 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 84

Conread position: 89-473
Cow position: chr8:28378704-28379085 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 77, 118

Conread position: 89-473
Cow position: chr8:30324386-30324016 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 148

Conread position: 89-473
Cow position: chr8:47549881-47550247 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 89-473
Cow position: chr8:53429838-53429466 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 88

Conread position: 89-478
Cow position: chr8:47342800-47342418 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 89-484
Cow position: chr8:14947233-14947624 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 77

Conread position: 91-473
Cow position: chr8:46952576-46952220 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 92-315
Cow position: chr8:37347395-37347614 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 169

Conread position: 92-386
Cow position: chr8:11278045-11278339 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 167, 203

Conread position: 92-401
Cow position: chr8:8668127-8668437 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 181

Conread position: 92-417
Cow position: chr8:18831803-18831484 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 75

Conread position: 92-439
Cow position: chr8:36249358-36249695 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 62, 83

Conread position: 92-473
Cow position: chr8:28884897-28884502 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 50

Conread position: 95-343
Cow position: chr8:47284013-47284246 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 95-347
Cow position: chr8:4552691-4552956 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 95-387
Cow position: chr8:5933984-5934270 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 26

Conread position: 95-403
Cow position: chr8:20157703-20158001 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 185

Conread position: 95-409
Cow position: chr8:34799743-34799425 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 71, 224

Conread position: 95-468
Cow position: chr8:9641412-9641047 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 10

Conread position: 95-469
Cow position: chr8:3704680-3704314 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 168

Conread position: 95-473
Cow position: chr8:10699408-10699768 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 96-473
Cow position: chr8:29765316-29764944 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 165

Conread position: 97-312
Cow position: chr8:27731092-27730887 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 97-416
Cow position: chr8:45127648-45127951 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 97-469
Cow position: chr8:24871815-24872175 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 68

Conread position: 97-473
Cow position: chr8:45493934-45493570 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 69

Conread position: 97-473
Cow position: chr8:47751859-47752227 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 99-473
Cow position: chr8:13374599-13374232 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 104

Conread position: 101-386
Cow position: chr8:3976285-3975995 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 252

Conread position: 101-462
Cow position: chr8:24471703-24471347 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 76

Conread position: 103-370
Cow position: chr8:59438231-59438492 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 74

Conread position: 107-366
Cow position: chr8:57208429-57208684 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 77

Conread position: 112-321
Cow position: chr8:32332444-32332655 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 14

Conread position: 115-293
Cow position: chr8:16413773-16413946 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 115-411
Cow position: chr8:40743318-40743600 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 147, 58

Conread position: 115-473
Cow position: chr8:20837161-20836816 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 142-473
Cow position: chr8:21826739-21827056 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 123

Conread position: 164-459
Cow position: chr8:38356860-38357147 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 168-482
Cow position: chr8:21224086-21224393 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 19

Conread position: 177-473
Cow position: chr8:16296776-16297070 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 178-346
Cow position: chr8:21222614-21222447 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 178-473
Cow position: chr8:37090106-37090391 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 179-453
Cow position: chr8:26961100-26960828 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 202, 132

Conread position: 187-473
Cow position: chr8:49721108-49720824 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 160

Conread position: 190-357
Cow position: chr8:35932395-35932229 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 190-473
Cow position: chr8:6681951-6682233 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 195-386
Cow position: chr8:51493070-51493255 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 222-473
Cow position: chr8:2621659-2621409 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 226-345
Cow position: chr8:37019940-37020059 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 247-417
Cow position: chr8:53451423-53451257 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 0

Show alignments to all cow chromosomes.