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Cow genome map

           
Conread name:
           
Tra1-TCH01A110102
        

               
Conread position:
               
1-135
               

               
Cow position:
               
chr14:803664-803794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr14:19394341-19394568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
137, 87
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr14:47609604-47609301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr14:6735885-6735571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:19594158-19593844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
5, 131
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr14:20640650-20640325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr14:45677209-45677527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr14:28795650-28795986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr14:12856578-12856935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 113
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr14:19851048-19850684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr14:40269863-40269478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr14:26490761-26490533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
139, 83
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr14:20712709-20712389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr14:8488169-8488512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr14:17755549-17755944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
3-147
               

               
Cow position:
               
chr14:46061924-46062066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
136, 90
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr14:26191122-26190886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr14:27076959-27077222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 150
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr14:27104064-27104436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr14:47973966-47974369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr14:16834305-16834635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr14:36709107-36709468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
183, 46
               

               
Conread position:
               
7-205
               

               
Cow position:
               
chr14:21933357-21933163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 93
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr14:4203112-4202912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
132, 93
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr14:46685289-46685480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr14:5572929-5573147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
171, 89
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr14:28003954-28004244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr14:25378510-25378224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
134, 72
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr14:13426836-13427100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr14:40033981-40034259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr14:6599971-6599658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr14:20016721-20016411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr14:40230649-40230341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 53
               

               
Conread position:
               
7-329
               

               
Cow position:
               
chr14:26097707-26097381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 94
               

               
Conread position:
               
7-330
               

               
Cow position:
               
chr14:5222305-5221981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr14:14622190-14621877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr14:31130389-31130080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr14:39821151-39821477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 38
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr14:38355174-38355501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
235, 45
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr14:6984976-6984635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
7-358
               

               
Cow position:
               
chr14:44257909-44258251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
130, 91
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chr14:41302843-41302671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr14:14221758-14222049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr14:17841305-17841013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr14:44237736-44237404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
8-358
               

               
Cow position:
               
chr14:43031783-43032142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
9-170
               

               
Cow position:
               
chr14:16352336-16352488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr14:7036369-7036202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr14:41253002-41252836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr14:40754259-40754085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr14:1868811-1868643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr14:27275151-27275320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr14:42437013-42437185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr14:46998027-46998217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
130, 113
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr14:12511909-12511726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr14:12035398-12035586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr14:44084501-44084297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 190
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr14:45045585-45045788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr14:24607955-24608149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr14:15313549-15313767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr14:33830290-33830510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
9-260
               

               
Cow position:
               
chr14:12520314-12520071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr14:29029817-29030070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr14:32732740-32732992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr14:12667717-12667978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr14:14979720-14979446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr14:28115199-28114926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr14:33309515-33309252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr14:33338487-33338223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
9-282
               

               
Cow position:
               
chr14:13845973-13846246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
233, 114
               

               
Conread position:
               
9-282
               

               
Cow position:
               
chr14:40432913-40433181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-282
               

               
Cow position:
               
chr14:50362782-50363065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr14:8786559-8786281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr14:10609668-10609957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr14:7695256-7695521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr14:9837905-9837620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
201, 127
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr14:3868440-3868156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr14:19129494-19129785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr14:32452237-32452530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-300
               

               
Cow position:
               
chr14:10858421-10858709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr14:36555163-36554866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr14:41325459-41325151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr14:47672893-47672597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
9-309
               

               
Cow position:
               
chr14:39434271-39433973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
9-315
               

               
Cow position:
               
chr14:24922088-24922399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr14:8101781-8102072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr14:8784184-8784470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
222, 68
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr14:9020014-9020321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr14:28304795-28304491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:13385356-13385669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 91
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:13809928-13810233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:19863445-19863145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:20600375-20600677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:22989022-22989330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:25403947-25403648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:26620598-26620915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:30661982-30662283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:35018765-35018460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:35381579-35381884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:36437498-36437188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:38144119-38143818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:38168680-38168979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
221, 96
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:38920940-38921233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:39618388-39618080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
181, 98
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:39778740-39779049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
205, 88
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:41471982-41471674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:41749771-41749468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr14:48740881-48740590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr14:10078256-10078560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr14:20010323-20010008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr14:45605082-45605393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr14:18657619-18657294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr14:33714690-33714382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr14:19189032-19189346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr14:34083177-34082847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr14:45052431-45052747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr14:16237524-16237197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr14:35420776-35420447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr14:37155865-37156178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr14:42784952-42785249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr14:43249576-43249894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
172, 70
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr14:47584669-47584339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr14:14327128-14326793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr14:41809665-41809339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr14:23526926-23527261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr14:3564272-3564599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-351
               

               
Cow position:
               
chr14:8541224-8540885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-358
               

               
Cow position:
               
chr14:5630150-5630499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-364
               

               
Cow position:
               
chr14:1868395-1868065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr14:23107311-23107674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr14:26108620-26108985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
9-403
               

               
Cow position:
               
chr14:18309319-18308938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 176
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr14:33247441-33247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 75
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr14:19618763-19618374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr14:21357546-21357947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr14:24416865-24417269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr14:25779090-25779481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 43
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr14:26116050-26116448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr14:28378347-28378746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
132, 79
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr14:25002024-25002246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr14:23761862-23762102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
10-263
               

               
Cow position:
               
chr14:20110733-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr14:6541735-6541438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr14:22966744-22967047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr14:42596372-42596673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
161, 45
               

               
Conread position:
               
11-179
               

               
Cow position:
               
chr14:12954395-12954231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 91
               

               
Conread position:
               
11-203
               

               
Cow position:
               
chr14:33341744-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 77
               

               
Conread position:
               
11-209
               

               
Cow position:
               
chr14:1859627-1859432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr14:1978081-1977874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr14:14182334-14182556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr14:39037214-39037471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr14:27591967-27591700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
11-279
               

               
Cow position:
               
chr14:1646193-1645932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
11-289
               

               
Cow position:
               
chr14:19372329-19372610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr14:11043501-11043222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
11-300
               

               
Cow position:
               
chr14:48689519-48689806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr14:37679014-37678713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr14:4990992-4991286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
236, 89
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr14:39807469-39807164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr14:11508245-11507947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
11-324
               

               
Cow position:
               
chr14:34199853-34199539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 75
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chr14:21018103-21018415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr14:47027382-47027069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr14:41479672-41479349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr14:42330345-42330664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr14:47591924-47591611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr14:7290790-7291108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
11-368
               

               
Cow position:
               
chr14:12559492-12559138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 73
               

               
Conread position:
               
12-135
               

               
Cow position:
               
chr14:37901984-37902107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
13-318
               

               
Cow position:
               
chr14:41180720-41180420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
14-179
               

               
Cow position:
               
chr14:26222733-26222896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
14-260
               

               
Cow position:
               
chr14:37447470-37447240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
14-261
               

               
Cow position:
               
chr14:12324412-12324663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr14:33643783-33643549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
14-279
               

               
Cow position:
               
chr14:34983863-34984121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
14-309
               

               
Cow position:
               
chr14:33538943-33538638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 212
               

               
Conread position:
               
14-330
               

               
Cow position:
               
chr14:31784957-31785281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
14-330
               

               
Cow position:
               
chr14:49021906-49021596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr14:44742388-44742077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
14-349
               

               
Cow position:
               
chr14:25231657-25231323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
14-353
               

               
Cow position:
               
chr14:33774054-33773722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
14-356
               

               
Cow position:
               
chr14:48412889-48412543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 79
               

               
Conread position:
               
14-381
               

               
Cow position:
               
chr14:25385893-25385533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr14:33828157-33828445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr14:46751667-46751969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
19-279
               

               
Cow position:
               
chr14:11615223-11614964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr14:37884412-37884143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
19-296
               

               
Cow position:
               
chr14:21691278-21691006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
19-316
               

               
Cow position:
               
chr14:17899480-17899778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
120, 22
               

               
Conread position:
               
19-338
               

               
Cow position:
               
chr14:15514011-15514333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
20-277
               

               
Cow position:
               
chr14:6175583-6175838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
20-347
               

               
Cow position:
               
chr14:36289798-36289497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
168, 26
               

               
Conread position:
               
20-412
               

               
Cow position:
               
chr14:18238141-18238535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
217, 26
               

               
Conread position:
               
21-306
               

               
Cow position:
               
chr14:42154972-42154677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr14:9308230-9308521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
118, 34
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr14:24236825-24237114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr14:37131653-37131954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr14:50589401-50589096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr14:24684132-24683827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
21-335
               

               
Cow position:
               
chr14:15054991-15054675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
21-364
               

               
Cow position:
               
chr14:41127893-41128232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
21-413
               

               
Cow position:
               
chr14:33326395-33326012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
116, 62
               

               
Conread position:
               
21-415
               

               
Cow position:
               
chr14:13006504-13006889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
115, 41
               

               
Conread position:
               
22-318
               

               
Cow position:
               
chr14:37236508-37236773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
22-340
               

               
Cow position:
               
chr14:40165425-40165742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
22-364
               

               
Cow position:
               
chr14:14187333-14187675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
23-221
               

               
Cow position:
               
chr14:4877229-4877037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr14:36166940-36167229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr14:7558439-7558122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr14:31734853-31734543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr14:44848370-44848075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
23-335
               

               
Cow position:
               
chr14:28565615-28565924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
23-337
               

               
Cow position:
               
chr14:15032760-15033071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
24-317
               

               
Cow position:
               
chr14:18485251-18484946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
24-318
               

               
Cow position:
               
chr14:39770231-39769935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
24-326
               

               
Cow position:
               
chr14:10906716-10907021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
26-210
               

               
Cow position:
               
chr14:23080762-23080582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
26-290
               

               
Cow position:
               
chr14:35498500-35498233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
26-317
               

               
Cow position:
               
chr14:49563656-49563374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chr14:4109487-4109177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 110
               

               
Conread position:
               
26-318
               

               
Cow position:
               
chr14:9901185-9901466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
216, 24
               

               
Conread position:
               
26-320
               

               
Cow position:
               
chr14:9875404-9875686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 49
               

               
Conread position:
               
26-329
               

               
Cow position:
               
chr14:26442338-26442031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
26-336
               

               
Cow position:
               
chr14:48427076-48427390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
113, 65
               

               
Conread position:
               
26-415
               

               
Cow position:
               
chr14:22583154-22583523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
215, 62
               

               
Conread position:
               
26-415
               

               
Cow position:
               
chr14:41210860-41211254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
204, 53
               

               
Conread position:
               
27-240
               

               
Cow position:
               
chr14:2975083-2974882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
29-328
               

               
Cow position:
               
chr14:9255296-9255004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
30-229
               

               
Cow position:
               
chr14:41966253-41966442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
30-231
               

               
Cow position:
               
chr14:16256775-16256970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
30-315
               

               
Cow position:
               
chr14:24981464-24981747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr14:23712697-23712981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
204, 71
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr14:33791197-33791485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
30-331
               

               
Cow position:
               
chr14:27848207-27848509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr14:10697497-10697216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
162, 63
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr14:10702831-10702524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr14:43453171-43452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr14:18449004-18448711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
31-326
               

               
Cow position:
               
chr14:6529977-6530259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
31-332
               

               
Cow position:
               
chr14:18904600-18904298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr14:38296271-38295980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
33-332
               

               
Cow position:
               
chr14:28987711-28988001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
34-250
               

               
Cow position:
               
chr14:14580882-14581093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
35-309
               

               
Cow position:
               
chr14:26448761-26449035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
35-310
               

               
Cow position:
               
chr14:34221067-34221342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:35700438-35700726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
35-318
               

               
Cow position:
               
chr14:7959790-7960056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
36-295
               

               
Cow position:
               
chr14:20483442-20483194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
38-229
               

               
Cow position:
               
chr14:35819596-35819410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
38-314
               

               
Cow position:
               
chr14:41716134-41716399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
38-318
               

               
Cow position:
               
chr14:21284639-21284925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
38-326
               

               
Cow position:
               
chr14:7482073-7482359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
39-324
               

               
Cow position:
               
chr14:27988664-27988950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
40-290
               

               
Cow position:
               
chr14:8750090-8750343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
40-307
               

               
Cow position:
               
chr14:8964567-8964828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
193, 51
               

               
Conread position:
               
43-355
               

               
Cow position:
               
chr14:38379044-38379353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
44-263
               

               
Cow position:
               
chr14:24387470-24387692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
44-317
               

               
Cow position:
               
chr14:8754342-8754621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
48, 175
               

               
Conread position:
               
44-360
               

               
Cow position:
               
chr14:33209328-33209021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 44
               

               
Conread position:
               
47-208
               

               
Cow position:
               
chr14:38673605-38673450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
47-219
               

               
Cow position:
               
chr14:23591260-23591425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr14:7270977-7270720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr14:11748882-11748626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr14:19221904-19222175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr14:24991848-24992108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
47-342
               

               
Cow position:
               
chr14:24580954-24581243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
165, 53
               

               
Conread position:
               
47-415
               

               
Cow position:
               
chr14:27312449-27312823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
49-291
               

               
Cow position:
               
chr14:39422565-39422319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
49-318
               

               
Cow position:
               
chr14:40347133-40346882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
49-330
               

               
Cow position:
               
chr14:46490231-46489948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
49-358
               

               
Cow position:
               
chr14:14280439-14280753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
50-332
               

               
Cow position:
               
chr14:35266984-35266704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
52-318
               

               
Cow position:
               
chr14:5835937-5836200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
55-200
               

               
Cow position:
               
chr14:37467728-37467588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
55-245
               

               
Cow position:
               
chr14:37435269-37435077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr14:11981671-11981949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
55-323
               

               
Cow position:
               
chr14:46782363-46782094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
56-210
               

               
Cow position:
               
chr14:19513378-19513236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
56-310
               

               
Cow position:
               
chr14:23464781-23464527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
57-415
               

               
Cow position:
               
chr14:28090939-28090590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
58-333
               

               
Cow position:
               
chr14:18345695-18345420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
62-311
               

               
Cow position:
               
chr14:24797537-24797291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
62-318
               

               
Cow position:
               
chr14:22381512-22381259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
62-324
               

               
Cow position:
               
chr14:37624447-37624186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
63-274
               

               
Cow position:
               
chr14:10721686-10721483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
63-332
               

               
Cow position:
               
chr14:35544475-35544205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
67-318
               

               
Cow position:
               
chr14:15913509-15913258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
69-316
               

               
Cow position:
               
chr14:10912918-10912679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
71-237
               

               
Cow position:
               
chr14:38747713-38747873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
71-314
               

               
Cow position:
               
chr14:39926248-39926483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
153, 32
               

               
Conread position:
               
71-318
               

               
Cow position:
               
chr14:11820078-11819828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
77-263
               

               
Cow position:
               
chr14:42276993-42277179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
79-332
               

               
Cow position:
               
chr14:18941250-18940994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
79-354
               

               
Cow position:
               
chr14:45292868-45292589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
82-318
               

               
Cow position:
               
chr14:23154832-23154588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
82-326
               

               
Cow position:
               
chr14:4649954-4649712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
82-336
               

               
Cow position:
               
chr14:50055446-50055715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
83-290
               

               
Cow position:
               
chr14:48399839-48400040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
87-192
               

               
Cow position:
               
chr14:25462982-25462876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
87-415
               

               
Cow position:
               
chr14:27362098-27362432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 259
               

               
Conread position:
               
88-311
               

               
Cow position:
               
chr14:8495210-8495442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 218
               

               
Conread position:
               
88-411
               

               
Cow position:
               
chr14:31399636-31399963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 36
               

               
Conread position:
               
88-412
               

               
Cow position:
               
chr14:25458388-25458700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr14:35712118-35711884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
89-334
               

               
Cow position:
               
chr14:34163811-34163565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr14:12488636-12488406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
91-412
               

               
Cow position:
               
chr14:19957848-19957527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
92-262
               

               
Cow position:
               
chr14:22952929-22952758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
92-307
               

               
Cow position:
               
chr14:15518313-15518092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr14:29606169-29605941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
92-331
               

               
Cow position:
               
chr14:20932678-20932927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
92-350
               

               
Cow position:
               
chr14:44878722-44878458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr14:38406847-38406595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
225, 39
               

               
Conread position:
               
93-225
               

               
Cow position:
               
chr14:50518908-50518776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
93-331
               

               
Cow position:
               
chr14:43046213-43046453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
94-289
               

               
Cow position:
               
chr14:6419238-6419045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
94-318
               

               
Cow position:
               
chr14:12614029-12613807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
94-318
               

               
Cow position:
               
chr14:50027286-50027510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
95-303
               

               
Cow position:
               
chr14:34355627-34355421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
44, 118
               

               
Conread position:
               
96-318
               

               
Cow position:
               
chr14:19633247-19633478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
96-334
               

               
Cow position:
               
chr14:3878524-3878764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
97-315
               

               
Cow position:
               
chr14:41756327-41756551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 143
               

               
Conread position:
               
98-332
               

               
Cow position:
               
chr14:5502091-5501842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
99-305
               

               
Cow position:
               
chr14:24786011-24786215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
100-415
               

               
Cow position:
               
chr14:42918161-42918483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
30, 216
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr14:36151479-36151718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr14:19624161-19624384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
105-245
               

               
Cow position:
               
chr14:28924462-28924604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
105-311
               

               
Cow position:
               
chr14:43035961-43036167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
105-318
               

               
Cow position:
               
chr14:34395596-34395376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
105-330
               

               
Cow position:
               
chr14:6490631-6490396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
105-332
               

               
Cow position:
               
chr14:106500-106265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr14:20468028-20467800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
106-307
               

               
Cow position:
               
chr14:19975306-19975502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
106-317
               

               
Cow position:
               
chr14:31888624-31888411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
106-318
               

               
Cow position:
               
chr14:46965637-46965854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 198
               

               
Conread position:
               
106-342
               

               
Cow position:
               
chr14:40737591-40737357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
106-415
               

               
Cow position:
               
chr14:22909682-22909366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
109-307
               

               
Cow position:
               
chr14:21964199-21964405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
112-318
               

               
Cow position:
               
chr14:46735388-46735608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
112-335
               

               
Cow position:
               
chr14:7316911-7317149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
113-335
               

               
Cow position:
               
chr14:17013589-17013821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
113-415
               

               
Cow position:
               
chr14:10090636-10090943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 218
               

               
Conread position:
               
114-318
               

               
Cow position:
               
chr14:19996402-19996614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
115-332
               

               
Cow position:
               
chr14:39518782-39519005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
116-328
               

               
Cow position:
               
chr14:34020775-34020996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
117-305
               

               
Cow position:
               
chr14:41190787-41190597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
122-317
               

               
Cow position:
               
chr14:14466383-14466185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
123-332
               

               
Cow position:
               
chr14:20666929-20666715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 181
               

               
Conread position:
               
125-415
               

               
Cow position:
               
chr14:35651108-35650817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
126-415
               

               
Cow position:
               
chr14:24893854-24894142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 221
               

               
Conread position:
               
127-285
               

               
Cow position:
               
chr14:37138233-37138072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
127-327
               

               
Cow position:
               
chr14:11641471-11641270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
128-296
               

               
Cow position:
               
chr14:17397502-17397331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
129-318
               

               
Cow position:
               
chr14:37108807-37108615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
133-332
               

               
Cow position:
               
chr14:35607354-35607144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 181
               

               
Conread position:
               
134-318
               

               
Cow position:
               
chr14:25695486-25695676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
137-415
               

               
Cow position:
               
chr14:20745682-20745951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
138-296
               

               
Cow position:
               
chr14:47036686-47036526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
138-316
               

               
Cow position:
               
chr14:9029566-9029389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
159, 43
               

               
Conread position:
               
138-317
               

               
Cow position:
               
chr14:34330655-34330834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
145-342
               

               
Cow position:
               
chr14:33751640-33751830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
150-307
               

               
Cow position:
               
chr14:21534912-21534755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-316
               

               
Cow position:
               
chr14:45068967-45068793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
150-318
               

               
Cow position:
               
chr14:27866015-27865836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
152-333
               

               
Cow position:
               
chr14:36775730-36775911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
155-317
               

               
Cow position:
               
chr14:34329526-34329364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
155-376
               

               
Cow position:
               
chr14:33580737-33580952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
157-331
               

               
Cow position:
               
chr14:29300236-29300056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
161-335
               

               
Cow position:
               
chr14:13997582-13997405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr14:28605320-28605501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
181-307
               

               
Cow position:
               
chr14:19513222-19513092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               
Show alignments to all cow chromosomes.