• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Tra1-TCH01A110102
        

               
Conread position:
               
1-219
               

               
Cow position:
               
chr21:9036429-9036209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr21:11360162-11359892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
229, 78
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr21:19363332-19363641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr21:12087714-12087413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr21:40786805-40786488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr21:33997099-33997409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr21:39664270-39664575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr21:36795731-36795414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr21:14760692-14760391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr21:27521212-27521514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr21:44114003-44114324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr21:28924237-28923930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr21:22856346-22856016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr21:3254279-3253965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:39401718-39401397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr21:27123993-27124334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr21:3498621-3498289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr21:22718656-22719058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr21:44671870-44671475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
229, 15
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr21:44754652-44755055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 70
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr21:40134281-40133967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr21:16166516-16166836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr21:41878594-41878287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 88
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr21:46551981-46552182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
5-412
               

               
Cow position:
               
chr21:4276480-4276881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
227, 65
               

               
Conread position:
               
7-187
               

               
Cow position:
               
chr21:977028-977197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
7-205
               

               
Cow position:
               
chr21:33413968-33414157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
7-206
               

               
Cow position:
               
chr21:1511409-1511218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr21:21633183-21633400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr21:17009101-17008873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr21:20153076-20152812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 95
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr21:25800520-25800247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr21:10114214-10114493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr21:10151925-10151606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr21:10601255-10601557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
84, 97
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr21:25286637-25286320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr21:28997782-28998095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr21:28626357-28626044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr21:33350861-33350539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
132, 71
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr21:42413977-42414305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr21:43357136-43357462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 36
               

               
Conread position:
               
7-334
               

               
Cow position:
               
chr21:34160072-34159753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
7-334
               

               
Cow position:
               
chr21:41579876-41579546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
132, 85
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr21:7710282-7709956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr21:8206892-8206575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr21:27614412-27614056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
181, 7
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr21:24698601-24698204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
242, 60
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr21:29069206-29069606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
8-332
               

               
Cow position:
               
chr21:24607505-24607182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
181, 71
               

               
Conread position:
               
8-414
               

               
Cow position:
               
chr21:30606968-30607380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr21:47363616-47363793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
9-190
               

               
Cow position:
               
chr21:868806-868982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr21:7377808-7377998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
9-203
               

               
Cow position:
               
chr21:40432563-40432379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-204
               

               
Cow position:
               
chr21:45262692-45262883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr21:40266239-40266048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr21:36910049-36909858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr21:46141166-46140964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr21:37014288-37014485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr21:22210128-22210333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
128, 85
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr21:6998065-6997846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr21:22121623-22121426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr21:36789913-36789700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr21:38664757-38664541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 72
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr21:16914896-16914677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr21:9940070-9940297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr21:20418564-20418787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr21:42022393-42022185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr21:10673239-10673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr21:18155448-18155677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr21:957790-957560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr21:2657927-2657707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 81
               

               
Conread position:
               
9-256
               

               
Cow position:
               
chr21:47158-46911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr21:12301393-12301632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-259
               

               
Cow position:
               
chr21:30835481-30835234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
9-265
               

               
Cow position:
               
chr21:12461849-12462107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr21:9697962-9698220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
9-273
               

               
Cow position:
               
chr21:35354649-35354393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr21:30222463-30222196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr21:10007521-10007791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
172, 81
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr21:11456691-11456960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr21:13840445-13840164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
9-288
               

               
Cow position:
               
chr21:10633522-10633800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr21:28244588-28244315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr21:41198281-41198575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 75
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr21:21169378-21169662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr21:23535827-23535549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr21:32339622-32339904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr21:22193981-22194286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr21:18790447-18790733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr21:643442-643155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
233, 71
               

               
Conread position:
               
9-309
               

               
Cow position:
               
chr21:39403407-39403718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr21:13488645-13488337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr21:28191150-28190846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr21:37344983-37345284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
9-314
               

               
Cow position:
               
chr21:30231576-30231888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
178, 84
               

               
Conread position:
               
9-315
               

               
Cow position:
               
chr21:18289781-18289475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr21:27863395-27863707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
175, 78
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr21:37299580-37299277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
221, 78
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr21:40589364-40589671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:1591672-1591362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:3360897-3361203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:3763624-3763926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
138, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:5427058-5426757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:5567104-5566800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:5898284-5898588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:6834167-6833863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:10264151-10263854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:13127981-13128280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
217, 20
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:18568521-18568840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:18940462-18940746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:20044646-20044960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:23149903-23150208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:27341477-27341786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:31253651-31253346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:32559247-32559543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:32574848-32574544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:38449331-38449641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:38900892-38900584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:41597929-41597626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:41621243-41620930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:44251725-44252015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:45329832-45330129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:45473640-45473947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
166, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:45971056-45971347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr21:46849010-46849312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
9-321
               

               
Cow position:
               
chr21:13365460-13365149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr21:641705-641390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
131, 70
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr21:34565096-34565407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr21:36763179-36762857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 205
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr21:3585250-3585553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr21:3818327-3818019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr21:23321960-23322278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr21:18844894-18845214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr21:4281757-4282068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr21:46242122-46242439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr21:395985-395675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr21:4399921-4399598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr21:34390857-34391172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr21:34654191-34653882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr21:42540104-42540422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
211, 68
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr21:9416369-9416039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr21:17511894-17511573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
179, 88
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr21:19258936-19258623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr21:20262217-20262537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr21:42384626-42384302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr21:8549799-8549477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr21:13584943-13585263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr21:25383144-25382804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 205
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr21:34739962-34739644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr21:47763999-47764317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr21:5650021-5649700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr21:28733795-28734118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr21:9990628-9990305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr21:33837-33510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr21:11644848-11645180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-344
               

               
Cow position:
               
chr21:37706297-37706622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr21:10004768-10005103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr21:33947135-33947461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr21:14452352-14452011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr21:17184035-17183701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
9-353
               

               
Cow position:
               
chr21:6051621-6051282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 76
               

               
Conread position:
               
9-354
               

               
Cow position:
               
chr21:10118677-10118328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 58
               

               
Conread position:
               
9-355
               

               
Cow position:
               
chr21:15584301-15584629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
9-356
               

               
Cow position:
               
chr21:12801629-12801971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
9-358
               

               
Cow position:
               
chr21:29002035-29002391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr21:24598776-24598428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
9-363
               

               
Cow position:
               
chr21:45355951-45355602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr21:18779858-18780209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
9-408
               

               
Cow position:
               
chr21:14464699-14464294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr21:29214042-29214431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:724767-725168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:13898305-13897915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:15976751-15976363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:19196046-19196446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:23587000-23586585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:30848823-30849222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 196
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:36162841-36163241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:38121219-38120825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr21:41974260-41974657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
9-434
               

               
Cow position:
               
chr21:13489764-13489346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
10-192
               

               
Cow position:
               
chr21:28919406-28919582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr21:10561466-10561717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr21:10514924-10514619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr21:24222420-24222727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr21:34010279-34010587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
10-332
               

               
Cow position:
               
chr21:5153738-5153414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
10-332
               

               
Cow position:
               
chr21:23192392-23192721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
11-217
               

               
Cow position:
               
chr21:44214242-44214040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr21:32904038-32904257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr21:29978644-29978898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
11-282
               

               
Cow position:
               
chr21:45920942-45921212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
11-285
               

               
Cow position:
               
chr21:20260203-20260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr21:36756717-36756453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr21:27145876-27146159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
179, 82
               

               
Conread position:
               
11-302
               

               
Cow position:
               
chr21:26245030-26244754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
270, 77
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chr21:5636604-5636902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr21:33263960-33263660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
203, 92
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr21:47465002-47465309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr21:13048077-13048386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
136, 82
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr21:17193635-17193949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr21:22861118-22860813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr21:23801012-23801310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr21:35997288-35996983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr21:36297609-36297290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chr21:23786148-23785833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chr21:44515380-44515077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr21:31662583-31662259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr21:40899455-40899133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr21:20160792-20160481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
11-333
               

               
Cow position:
               
chr21:10727393-10727077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chr21:24888115-24887721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
108, 75
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr21:19766970-19766576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr21:24858431-24858033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
222, 72
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chr21:19513980-19513819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
12-318
               

               
Cow position:
               
chr21:17642869-17643159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
218, 72
               

               
Conread position:
               
13-292
               

               
Cow position:
               
chr21:13754900-13754639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
13-326
               

               
Cow position:
               
chr21:5392421-5392739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
14-279
               

               
Cow position:
               
chr21:28989727-28989462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr21:713055-712768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 134
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr21:10001188-10000913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
14-307
               

               
Cow position:
               
chr21:7581792-7582087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
14-315
               

               
Cow position:
               
chr21:33727348-33727647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr21:48263247-48262942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr21:49699927-49700239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
14-354
               

               
Cow position:
               
chr21:46829159-46829495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
14-413
               

               
Cow position:
               
chr21:7564194-7564598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 204
               

               
Conread position:
               
15-188
               

               
Cow position:
               
chr21:9302315-9302482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
15-370
               

               
Cow position:
               
chr21:17175255-17174898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr21:21223393-21223101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
214, 38
               

               
Conread position:
               
19-293
               

               
Cow position:
               
chr21:18064806-18065088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
19-328
               

               
Cow position:
               
chr21:4098977-4098676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
19-332
               

               
Cow position:
               
chr21:4795333-4795019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
20-201
               

               
Cow position:
               
chr21:19210821-19210646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 63
               

               
Conread position:
               
20-224
               

               
Cow position:
               
chr21:28237600-28237805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
20-227
               

               
Cow position:
               
chr21:8527377-8527571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
20-230
               

               
Cow position:
               
chr21:6017732-6017519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr21:42007355-42007595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
20-275
               

               
Cow position:
               
chr21:18041740-18041989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
21-282
               

               
Cow position:
               
chr21:24642627-24642365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
21-314
               

               
Cow position:
               
chr21:18842131-18842423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
209, 70
               

               
Conread position:
               
21-326
               

               
Cow position:
               
chr21:2679663-2679355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr21:16187701-16188000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
210, 70
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr21:37480061-37479753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
191, 67
               

               
Conread position:
               
22-203
               

               
Cow position:
               
chr21:30256164-30256340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr21:10410329-10410125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
22-240
               

               
Cow position:
               
chr21:17875088-17875299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
22-240
               

               
Cow position:
               
chr21:23980077-23980289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr21:2260260-2260476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
22-318
               

               
Cow position:
               
chr21:32536082-32535787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
22-329
               

               
Cow position:
               
chr21:28882244-28881942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
22-415
               

               
Cow position:
               
chr21:4904862-4905245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
23-289
               

               
Cow position:
               
chr21:44825785-44826044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
210, 69
               

               
Conread position:
               
23-325
               

               
Cow position:
               
chr21:29943108-29942810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr21:28429545-28429246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
23-334
               

               
Cow position:
               
chr21:18828198-18828514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
24-318
               

               
Cow position:
               
chr21:3380975-3381270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
24-318
               

               
Cow position:
               
chr21:3813381-3813672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
155, 5
               

               
Conread position:
               
24-328
               

               
Cow position:
               
chr21:31691588-31691278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr21:30236722-30236920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
25-331
               

               
Cow position:
               
chr21:4189943-4189632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 89
               

               
Conread position:
               
25-410
               

               
Cow position:
               
chr21:42501148-42500758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
26-200
               

               
Cow position:
               
chr21:7394484-7394314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
26-328
               

               
Cow position:
               
chr21:29485083-29484785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
26-332
               

               
Cow position:
               
chr21:33982706-33983013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
27-291
               

               
Cow position:
               
chr21:15611244-15610989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 11
               

               
Conread position:
               
27-318
               

               
Cow position:
               
chr21:11114816-11114522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
27-415
               

               
Cow position:
               
chr21:27229691-27230070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
112, 52
               

               
Conread position:
               
29-307
               

               
Cow position:
               
chr21:8235457-8235722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
29-318
               

               
Cow position:
               
chr21:13738658-13738382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
29-332
               

               
Cow position:
               
chr21:38918300-38918012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
29-360
               

               
Cow position:
               
chr21:28955606-28955291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 70
               

               
Conread position:
               
30-198
               

               
Cow position:
               
chr21:22720325-22720162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
30-209
               

               
Cow position:
               
chr21:33359940-33360110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
30-247
               

               
Cow position:
               
chr21:18415153-18414936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
30-264
               

               
Cow position:
               
chr21:13089371-13089603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
30-303
               

               
Cow position:
               
chr21:28810165-28810437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
30-311
               

               
Cow position:
               
chr21:15911500-15911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr21:6102164-6102457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr21:5344763-5344472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr21:39888652-39888933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr21:41155962-41155659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
30-415
               

               
Cow position:
               
chr21:2420596-2420227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
158, 68
               

               
Conread position:
               
30-428
               

               
Cow position:
               
chr21:33563105-33562721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
158, 58
               

               
Conread position:
               
31-269
               

               
Cow position:
               
chr21:5985222-5985456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
31-317
               

               
Cow position:
               
chr21:47729925-47730207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
31-326
               

               
Cow position:
               
chr21:8351215-8351501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
31-332
               

               
Cow position:
               
chr21:16612721-16612426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
31-415
               

               
Cow position:
               
chr21:12960804-12961191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
32-243
               

               
Cow position:
               
chr21:9979875-9980074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr21:37282397-37282120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
217, 47
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr21:17616220-17616526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
33-318
               

               
Cow position:
               
chr21:28993522-28993815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
33-325
               

               
Cow position:
               
chr21:45867028-45866740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
34-240
               

               
Cow position:
               
chr21:34722695-34722893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
35-318
               

               
Cow position:
               
chr21:20925411-20925695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
35-332
               

               
Cow position:
               
chr21:6764608-6764905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
35-332
               

               
Cow position:
               
chr21:35062179-35061885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
35-415
               

               
Cow position:
               
chr21:47802167-47802540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
38-329
               

               
Cow position:
               
chr21:37322214-37322490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
39-260
               

               
Cow position:
               
chr21:26647920-26648138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
39-346
               

               
Cow position:
               
chr21:24765370-24765067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
40-237
               

               
Cow position:
               
chr21:29224773-29224966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
40-314
               

               
Cow position:
               
chr21:39450074-39450353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
40-328
               

               
Cow position:
               
chr21:3236613-3236333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
43-294
               

               
Cow position:
               
chr21:5454907-5455155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
43-311
               

               
Cow position:
               
chr21:37361380-37361652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 175
               

               
Conread position:
               
43-326
               

               
Cow position:
               
chr21:394120-393824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
43-332
               

               
Cow position:
               
chr21:8985636-8985346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
47-291
               

               
Cow position:
               
chr21:28617671-28617428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr21:17410578-17410854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
47-344
               

               
Cow position:
               
chr21:5137407-5137705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
47-415
               

               
Cow position:
               
chr21:2785696-2786070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
47-432
               

               
Cow position:
               
chr21:27743829-27743446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
52-306
               

               
Cow position:
               
chr21:35897564-35897803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
52-328
               

               
Cow position:
               
chr21:31676574-31676299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
53-318
               

               
Cow position:
               
chr21:42459462-42459736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
55-257
               

               
Cow position:
               
chr21:4568357-4568160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
55-289
               

               
Cow position:
               
chr21:42190099-42190329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
55-305
               

               
Cow position:
               
chr21:30592232-30592479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
175, 23
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr21:42145991-42145727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr21:44109075-44108818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 38
               

               
Conread position:
               
55-320
               

               
Cow position:
               
chr21:9862570-9862816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr21:21480112-21480382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
177, 24
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr21:39809965-39809764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
56-315
               

               
Cow position:
               
chr21:28443302-28443565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
158, 24
               

               
Conread position:
               
57-316
               

               
Cow position:
               
chr21:911896-912154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
57-325
               

               
Cow position:
               
chr21:21077396-21077133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
58-290
               

               
Cow position:
               
chr21:36793964-36793731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
59-306
               

               
Cow position:
               
chr21:49662053-49662294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
62-205
               

               
Cow position:
               
chr21:15544155-15544290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
62-317
               

               
Cow position:
               
chr21:42905306-42905566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
62-368
               

               
Cow position:
               
chr21:34835364-34835662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
63-318
               

               
Cow position:
               
chr21:42913679-42913935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
63-358
               

               
Cow position:
               
chr21:2927129-2927432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
64-187
               

               
Cow position:
               
chr21:14228504-14228624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
64-332
               

               
Cow position:
               
chr21:40244508-40244231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
71-415
               

               
Cow position:
               
chr21:31701894-31702234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
76-318
               

               
Cow position:
               
chr21:15445016-15445268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
79-318
               

               
Cow position:
               
chr21:12973191-12973442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr21:5426027-5425757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
82-282
               

               
Cow position:
               
chr21:10608402-10608608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
82-317
               

               
Cow position:
               
chr21:34237439-34237207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
83-310
               

               
Cow position:
               
chr21:42024170-42023943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
83-318
               

               
Cow position:
               
chr21:8618326-8618085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
83-318
               

               
Cow position:
               
chr21:21216093-21216330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
83-328
               

               
Cow position:
               
chr21:41957127-41957373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
83-332
               

               
Cow position:
               
chr21:48250977-48251233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
84-316
               

               
Cow position:
               
chr21:12617186-12616952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr21:7132419-7132651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
84-333
               

               
Cow position:
               
chr21:46264219-46263972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
85-289
               

               
Cow position:
               
chr21:32297460-32297671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
85-318
               

               
Cow position:
               
chr21:42053217-42053454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
85-331
               

               
Cow position:
               
chr21:47066851-47067089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
87-309
               

               
Cow position:
               
chr21:46973088-46973307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
87-318
               

               
Cow position:
               
chr21:18495015-18494777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr21:35569336-35569580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
88-318
               

               
Cow position:
               
chr21:45151576-45151812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr21:8289588-8289830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
89-364
               

               
Cow position:
               
chr21:28944321-28944599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
89-383
               

               
Cow position:
               
chr21:8931846-8932123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
89-415
               

               
Cow position:
               
chr21:30990235-30990546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
148, 8
               

               
Conread position:
               
90-326
               

               
Cow position:
               
chr21:40058850-40058609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 209
               

               
Conread position:
               
90-331
               

               
Cow position:
               
chr21:15867352-15867110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
91-264
               

               
Cow position:
               
chr21:2294030-2293857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 134
               

               
Conread position:
               
91-405
               

               
Cow position:
               
chr21:20910053-20910379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
92-348
               

               
Cow position:
               
chr21:29247819-29248063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
92-368
               

               
Cow position:
               
chr21:21143944-21143660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
92-403
               

               
Cow position:
               
chr21:18783646-18783949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
92-415
               

               
Cow position:
               
chr21:23984240-23984562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
93-240
               

               
Cow position:
               
chr21:46470010-46469862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
93-318
               

               
Cow position:
               
chr21:17302338-17302565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
93-415
               

               
Cow position:
               
chr21:4998445-4998763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 208
               

               
Conread position:
               
94-328
               

               
Cow position:
               
chr21:1464271-1464030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
45, 233
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr21:45330562-45330815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
95-318
               

               
Cow position:
               
chr21:9278418-9278183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
96-313
               

               
Cow position:
               
chr21:802270-802478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
96-335
               

               
Cow position:
               
chr21:18935797-18935555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
97-318
               

               
Cow position:
               
chr21:33791329-33791557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr21:24094716-24094933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr21:33210235-33210009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
100-415
               

               
Cow position:
               
chr21:4080391-4080076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
101-335
               

               
Cow position:
               
chr21:42170669-42170424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 209
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr21:28027836-28027616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
104-318
               

               
Cow position:
               
chr21:48484417-48484630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
104-330
               

               
Cow position:
               
chr21:18932515-18932289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
106-291
               

               
Cow position:
               
chr21:27624736-27624550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
106-317
               

               
Cow position:
               
chr21:34738638-34738410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
107-332
               

               
Cow position:
               
chr21:34659061-34658831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
108-293
               

               
Cow position:
               
chr21:26829232-26829410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
109-306
               

               
Cow position:
               
chr21:9998692-9998897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 195
               

               
Conread position:
               
111-317
               

               
Cow position:
               
chr21:13395575-13395368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
112-318
               

               
Cow position:
               
chr21:42463812-42464033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
112-415
               

               
Cow position:
               
chr21:32237317-32237022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
113-274
               

               
Cow position:
               
chr21:938049-937894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr21:29979737-29979935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
114-318
               

               
Cow position:
               
chr21:23822187-23821979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
114-326
               

               
Cow position:
               
chr21:23478697-23478916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 182
               

               
Conread position:
               
115-318
               

               
Cow position:
               
chr21:28512548-28512343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
115-396
               

               
Cow position:
               
chr21:36819193-36819482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
117-318
               

               
Cow position:
               
chr21:12366399-12366198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
117-318
               

               
Cow position:
               
chr21:24714674-24714464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 180
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr21:82096-81868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
117-414
               

               
Cow position:
               
chr21:33419706-33419993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
120-332
               

               
Cow position:
               
chr21:13303833-13303616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
123-331
               

               
Cow position:
               
chr21:23683559-23683348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
123-331
               

               
Cow position:
               
chr21:42348663-42348880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
127-318
               

               
Cow position:
               
chr21:13163897-13163704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
138-316
               

               
Cow position:
               
chr21:4268871-4268686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chr21:24797679-24797496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
145-317
               

               
Cow position:
               
chr21:42465821-42465641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
146-415
               

               
Cow position:
               
chr21:31159250-31158977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 185
               

               
Conread position:
               
155-333
               

               
Cow position:
               
chr21:34254301-34254486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr21:13256779-13256600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
159-307
               

               
Cow position:
               
chr21:35897456-35897304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
166-311
               

               
Cow position:
               
chr21:1511036-1510891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
169-318
               

               
Cow position:
               
chr21:28029365-28029208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
169-318
               

               
Cow position:
               
chr21:28907683-28907833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
169-326
               

               
Cow position:
               
chr21:20162502-20162338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
172-332
               

               
Cow position:
               
chr21:17282666-17282500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
174-346
               

               
Cow position:
               
chr21:46132019-46132195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
176-415
               

               
Cow position:
               
chr21:31278735-31278504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
177-412
               

               
Cow position:
               
chr21:20548955-20549193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
183-353
               

               
Cow position:
               
chr21:21000080-21000250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr21:5418811-5418582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 100
               
Show alignments to all cow chromosomes.