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Cow genome map

           
Conread name:
           
Tra1-TCH01A110102
        

               
Conread position:
               
1-190
               

               
Cow position:
               
chr3:20993853-20993667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr3:70762083-70762302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:83797794-83798031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr3:59884031-59884272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
138, 85
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr3:27940104-27940365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr3:7337744-7338028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
236, 78
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr3:80084138-80084431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr3:25690833-25690516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr3:23448097-23448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr3:60933457-60933143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr3:4457031-4457349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr3:44102008-44101705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr3:50768719-50768403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr3:67929220-67929542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr3:79220898-79220573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr3:81471057-81471376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr3:53270869-53270544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr3:24352900-24352597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr3:67704585-67704256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr3:77225157-77224832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr3:18185115-18184778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr3:24548797-24549122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr3:7763695-7763372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr3:59000717-59001037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr3:61857546-61857203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr3:58540482-58540838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr3:15153728-15153531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
133, 86
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr3:84596925-84597143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr3:73709084-73708795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 86
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr3:8924079-8923776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr3:29596427-29596121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
180, 76
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr3:32183982-32184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr3:41718428-41718141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr3:5419827-5420142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr3:61278945-61278630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr3:75570416-75570717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr3:36174033-36174366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr3:58865436-58865815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
160, 34
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr3:26553679-26554079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr3:35852435-35852834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 80
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr3:80953682-80953506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr3:76015327-76015073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
135, 89
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr3:42178188-42177885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr3:18498051-18497739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr3:5850894-5851217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
226, 75
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr3:56637700-56637313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr3:1517478-1517655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
131, 87
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr3:13517123-13517520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr3:75853295-75853514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
7-138
               

               
Cow position:
               
chr3:622930-623058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
7-204
               

               
Cow position:
               
chr3:77582137-77581950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr3:31850345-31850543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
178, 28
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr3:36375508-36375738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr3:74205776-74206009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr3:53222045-53221774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr3:48296730-48296461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr3:16752227-16752502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
223, 19
               

               
Conread position:
               
7-307
               

               
Cow position:
               
chr3:57754444-57754749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr3:69416749-69417056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
132, 81
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr3:14632951-14633255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 83
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr3:74611596-74611293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr3:53592657-53592974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:2216400-2216084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
131, 72
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:49460894-49461213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:50462369-50462066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:53046631-53046933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 28
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:55124248-55124554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:66900701-66901018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 86
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:73443060-73443363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr3:77365258-77365570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 205
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr3:76138503-76138208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr3:37041451-37041145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
132, 81
               

               
Conread position:
               
7-330
               

               
Cow position:
               
chr3:37452101-37451781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr3:28898191-28898511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr3:58968871-58969182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
132, 76
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr3:67744596-67744926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr3:60892657-60892266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chr3:74939600-74939414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr3:58973327-58973144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr3:70632052-70631824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
8-257
               

               
Cow position:
               
chr3:49140018-49140251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr3:52608213-52607935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
222, 85
               

               
Conread position:
               
8-317
               

               
Cow position:
               
chr3:32585181-32584883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr3:26904140-26903839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr3:51146639-51146942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
224, 26
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr3:55010134-55010431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr3:61840306-61840013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr3:66375350-66375045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr3:75057103-75057390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
241, 37
               

               
Conread position:
               
8-328
               

               
Cow position:
               
chr3:20471333-20471646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
173, 67
               

               
Conread position:
               
8-362
               

               
Cow position:
               
chr3:56346-56689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
9-144
               

               
Cow position:
               
chr3:53703933-53704064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
9-153
               

               
Cow position:
               
chr3:65019835-65019973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-161
               

               
Cow position:
               
chr3:33693849-33693702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
9-171
               

               
Cow position:
               
chr3:72503866-72504023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
127, 78
               

               
Conread position:
               
9-178
               

               
Cow position:
               
chr3:22510057-22509894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-179
               

               
Cow position:
               
chr3:84175793-84175959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr3:74846679-74846845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
155, 67
               

               
Conread position:
               
9-183
               

               
Cow position:
               
chr3:61116823-61116995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr3:60389794-60389628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr3:3889538-3889707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr3:15443699-15443870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr3:21014928-21015103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
81, 96
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr3:73820339-73820511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
9-195
               

               
Cow position:
               
chr3:22221357-22221170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr3:70333935-70334117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
61, 65
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr3:26874620-26874433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
9-203
               

               
Cow position:
               
chr3:34871597-34871411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-203
               

               
Cow position:
               
chr3:76267945-76268139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr3:79645406-79645603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
127, 79
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr3:48810615-48810800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 84
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr3:30222221-30222021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr3:18144088-18144292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
128, 87
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr3:55819788-55819572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr3:19792935-19792716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr3:62046694-62046486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr3:76922633-76922842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr3:26982088-26981883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr3:35153647-35153440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
180, 72
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr3:57274089-57273882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr3:74502295-74502507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr3:63269253-63269036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr3:34669703-34669918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
130, 49
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr3:59035070-59034843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr3:13890507-13890276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr3:4319741-4319520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr3:15506478-15506257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr3:27696948-27697173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr3:53094901-53095134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr3:67698306-67698085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr3:53875735-53875957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr3:76387578-76387794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr3:10896852-10896634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr3:59621618-59621837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr3:78896677-78896446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
175, 79
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr3:55318867-55319110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
9-256
               

               
Cow position:
               
chr3:12705513-12705757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
130, 68
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr3:76713295-76713537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr3:24468355-24468596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr3:21547070-21547324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
170, 78
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr3:68145813-68146058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr3:83215292-83215029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
9-275
               

               
Cow position:
               
chr3:67930156-67930411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr3:34937874-34937603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-288
               

               
Cow position:
               
chr3:23444858-23445136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr3:8393972-8393692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr3:80564996-80564713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr3:58767293-58767031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr3:61171478-61171758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-291
               

               
Cow position:
               
chr3:13507498-13507214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr3:5044783-5045061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 54
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr3:54903594-54903317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr3:83201494-83201781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr3:116219-115955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 84
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr3:18725614-18725888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
233, 62
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr3:22820601-22820315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr3:56476712-56476428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 84
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr3:61144124-61143839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr3:30008878-30009170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 103
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr3:51234066-51234357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr3:52147621-52147941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 175
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr3:75080793-75080504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 68
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr3:50614671-50614375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr3:73460997-73460715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
222, 84
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr3:52017801-52017491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr3:59474152-59473847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
202, 98
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr3:72391112-72390816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr3:73395146-73394851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr3:72131268-72131564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
9-309
               

               
Cow position:
               
chr3:22887899-22888184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
172, 84
               

               
Conread position:
               
9-309
               

               
Cow position:
               
chr3:80818747-80818462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
233, 84
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr3:13301820-13302125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr3:45881928-45881640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
230, 88
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr3:51578291-51578590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
9-314
               

               
Cow position:
               
chr3:70899921-70899628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr3:17456238-17456543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr3:39066362-39066059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
181, 70
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr3:2025228-2024909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr3:53384250-53384558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr3:64280900-64281211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr3:66292146-66292453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:2506448-2506755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:5374358-5374059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
221, 26
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:6873222-6873521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:14263423-14263116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:17222112-17222420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:26066028-26065725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:29887389-29887700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:30180116-30179806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:38347220-38346925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:43528202-43528513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:48252915-48252621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
126, 77
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:49482686-49482980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:49650418-49650104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:53739155-53739467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:56059841-56059531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:57624494-57624187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:59608533-59608232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:65058728-65058426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:71231425-71231130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:71497108-71497422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 76
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:75158391-75158089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr3:82056089-82056393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr3:38691376-38691682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr3:54946161-54945844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 91
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr3:27545789-27546116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 66
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr3:26219021-26219345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr3:37186857-37186552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
233, 70
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr3:54435006-54434690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr3:27532624-27532948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr3:36100868-36100542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr3:55189723-55190036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr3:70401926-70401617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr3:70334665-70334990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr3:17934908-17935211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr3:31309324-31309644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr3:52863154-52863471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 75
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr3:55272015-55272330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr3:70565708-70566027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr3:80072159-80071828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:6690030-6689701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:7566387-7566709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 129
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:10958210-10958518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:17694975-17695296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
158, 29
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:33698761-33698431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:53113205-53112878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 68
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:53572722-53573040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:53910138-53909824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:59101857-59101545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:68587052-68586748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr3:72676121-72675797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr3:14552905-14552587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr3:45647710-45647383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr3:64010782-64011107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr3:14465676-14465997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
128, 103
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr3:14626120-14626443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr3:23169036-23169363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr3:55970537-55970214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
134, 82
               

               
Conread position:
               
9-339
               

               
Cow position:
               
chr3:20437626-20437944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr3:73759487-73759825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr3:9641598-9641258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
9-352
               

               
Cow position:
               
chr3:5097237-5096893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-352
               

               
Cow position:
               
chr3:68881091-68881419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-356
               

               
Cow position:
               
chr3:63179887-63179554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-362
               

               
Cow position:
               
chr3:23471429-23471788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 139
               

               
Conread position:
               
9-362
               

               
Cow position:
               
chr3:68707983-68708321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-364
               

               
Cow position:
               
chr3:17957497-17957145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr3:3985352-3985002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr3:59649288-59648900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
9-414
               

               
Cow position:
               
chr3:28908173-28908567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-414
               

               
Cow position:
               
chr3:66609814-66610202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:2675059-2674664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:4050223-4049838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:17936809-17937216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:51033396-51032980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 308
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:54781973-54782376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:57577727-57577335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
175, 77
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:60597571-60597189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:65237054-65236654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:65413248-65413652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 81
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:73961667-73962044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:79884456-79884851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:80053512-80053898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr3:82461209-82460807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
9-435
               

               
Cow position:
               
chr3:18459498-18459905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
130, 68
               

               
Conread position:
               
10-184
               

               
Cow position:
               
chr3:13380246-13380424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 175
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr3:15992747-15992548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 89
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr3:75687408-75687625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr3:42489272-42489582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr3:57764247-57763947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr3:79902525-79902227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr3:72458-72114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr3:55085140-55085555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
11-185
               

               
Cow position:
               
chr3:3656542-3656371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr3:43727107-43726931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
11-200
               

               
Cow position:
               
chr3:19793562-19793747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
11-206
               

               
Cow position:
               
chr3:84199704-84199519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
11-225
               

               
Cow position:
               
chr3:81359079-81359292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr3:36446690-36446911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr3:38828787-38828572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 61
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr3:15751685-15751917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr3:16656467-16656702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
221, 24
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr3:74134732-74134484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
219, 68
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr3:26960560-26960817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
11-293
               

               
Cow position:
               
chr3:52652057-52652325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr3:44932544-44932256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 80
               

               
Conread position:
               
11-295
               

               
Cow position:
               
chr3:43233534-43233250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-301
               

               
Cow position:
               
chr3:22232626-22232906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr3:15655118-15655417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
11-311
               

               
Cow position:
               
chr3:54771034-54770735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chr3:14801772-14801477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr3:68342220-68342529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr3:210347-210046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 73
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr3:19708080-19708375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr3:30463144-30463442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
231, 40
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr3:31206904-31206596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 97
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr3:62292090-62292392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 81
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr3:79292856-79292558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chr3:65969195-65968871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 89
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr3:46901227-46900909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr3:64536532-64536830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr3:15228795-15229109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
170, 82
               

               
Conread position:
               
11-334
               

               
Cow position:
               
chr3:80468648-80468941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr3:3032435-3032105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
11-343
               

               
Cow position:
               
chr3:77271250-77271569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chr3:63203463-63203138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
11-353
               

               
Cow position:
               
chr3:74878561-74878915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr3:48629560-48629908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
11-368
               

               
Cow position:
               
chr3:58131024-58130674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
228, 90
               

               
Conread position:
               
11-411
               

               
Cow position:
               
chr3:63147122-63147520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr3:10347379-10346982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr3:48241642-48241256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr3:49382977-49382587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
177, 68
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr3:51255811-51255409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr3:53588355-53588757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
12-318
               

               
Cow position:
               
chr3:81277671-81277980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 80
               

               
Conread position:
               
12-330
               

               
Cow position:
               
chr3:61323352-61323064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr3:27289966-27289647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
13-300
               

               
Cow position:
               
chr3:11711991-11711695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
126, 90
               

               
Conread position:
               
13-341
               

               
Cow position:
               
chr3:17742549-17742209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr3:58765050-58765253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
14-240
               

               
Cow position:
               
chr3:55712465-55712235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
14-290
               

               
Cow position:
               
chr3:18686931-18686668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
14-291
               

               
Cow position:
               
chr3:55947609-55947326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
14-301
               

               
Cow position:
               
chr3:71238179-71237898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
14-316
               

               
Cow position:
               
chr3:12711890-12712197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr3:15954060-15954353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 92
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr3:38864150-38863837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
14-342
               

               
Cow position:
               
chr3:73467656-73467319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
14-368
               

               
Cow position:
               
chr3:54050006-54050345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
172, 41
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr3:83815762-83816147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
14-415
               

               
Cow position:
               
chr3:15388244-15387840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
14-415
               

               
Cow position:
               
chr3:39171461-39171869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
15-318
               

               
Cow position:
               
chr3:68627663-68627951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
16-240
               

               
Cow position:
               
chr3:55778060-55777843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
16-279
               

               
Cow position:
               
chr3:15684898-15685154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
214, 64
               

               
Conread position:
               
16-288
               

               
Cow position:
               
chr3:55106416-55106689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr3:55373546-55373903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
16-415
               

               
Cow position:
               
chr3:5100749-5101125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
17-326
               

               
Cow position:
               
chr3:77227342-77227034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
122, 21
               

               
Conread position:
               
18-354
               

               
Cow position:
               
chr3:13329757-13330084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
19-237
               

               
Cow position:
               
chr3:61009413-61009626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
19-264
               

               
Cow position:
               
chr3:2198903-2198660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
19-317
               

               
Cow position:
               
chr3:64172460-64172170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
222, 68
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr3:12255501-12255204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
19-328
               

               
Cow position:
               
chr3:12287249-12286949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
213, 16
               

               
Conread position:
               
19-332
               

               
Cow position:
               
chr3:33327729-33327417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
19-332
               

               
Cow position:
               
chr3:42480639-42480334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
19-334
               

               
Cow position:
               
chr3:66708046-66708365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
19-337
               

               
Cow position:
               
chr3:18458638-18458951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 69
               

               
Conread position:
               
19-356
               

               
Cow position:
               
chr3:74699362-74699709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr3:26739395-26739617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
20-256
               

               
Cow position:
               
chr3:39328419-39328186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr3:66866382-66866622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
20-304
               

               
Cow position:
               
chr3:74620970-74621259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr3:45524286-45523990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr3:13899428-13899729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr3:74500262-74499948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
20-333
               

               
Cow position:
               
chr3:22089258-22089573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
20-333
               

               
Cow position:
               
chr3:76172650-76172953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
119, 18
               

               
Conread position:
               
20-335
               

               
Cow position:
               
chr3:42423307-42423624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
20-415
               

               
Cow position:
               
chr3:59691910-59691539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
21-231
               

               
Cow position:
               
chr3:74079618-74079824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
21-299
               

               
Cow position:
               
chr3:41328459-41328198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
21-308
               

               
Cow position:
               
chr3:71430186-71430478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr3:22171205-22170913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr3:59799266-59798978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 70
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr3:69961700-69962000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 9
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr3:5365695-5365396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr3:70896066-70895756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr3:83491104-83490786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
21-410
               

               
Cow position:
               
chr3:29807481-29807103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
21-413
               

               
Cow position:
               
chr3:4461466-4461851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
22-236
               

               
Cow position:
               
chr3:46006001-46006217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
22-311
               

               
Cow position:
               
chr3:525363-525085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
22-317
               

               
Cow position:
               
chr3:14601694-14601988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
22-318
               

               
Cow position:
               
chr3:16157693-16157405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
167, 63
               

               
Conread position:
               
22-326
               

               
Cow position:
               
chr3:21340944-21341247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
22-328
               

               
Cow position:
               
chr3:52650510-52650816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
22-330
               

               
Cow position:
               
chr3:46341486-46341173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
22-332
               

               
Cow position:
               
chr3:31046934-31047232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
117, 64
               

               
Conread position:
               
22-415
               

               
Cow position:
               
chr3:37599411-37599781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 68
               

               
Conread position:
               
23-277
               

               
Cow position:
               
chr3:27274547-27274298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
23-293
               

               
Cow position:
               
chr3:25755040-25754785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chr3:14625374-14625642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
23-296
               

               
Cow position:
               
chr3:67165935-67165658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
111, 10
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr3:5416204-5416507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
166, 70
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr3:36671975-36672281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr3:59451609-59451319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
158, 7
               

               
Conread position:
               
23-347
               

               
Cow position:
               
chr3:21081360-21081692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
23-369
               

               
Cow position:
               
chr3:59333787-59333448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
24-231
               

               
Cow position:
               
chr3:70609647-70609441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 89
               

               
Conread position:
               
24-321
               

               
Cow position:
               
chr3:15051933-15052216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr3:14598957-14598761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
25-314
               

               
Cow position:
               
chr3:1830559-1830835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
25-416
               

               
Cow position:
               
chr3:61539820-61539431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr3:83845929-83845705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 81
               

               
Conread position:
               
26-259
               

               
Cow position:
               
chr3:75045862-75046082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
26-307
               

               
Cow position:
               
chr3:72019132-72018854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
26-329
               

               
Cow position:
               
chr3:8393363-8393059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
26-368
               

               
Cow position:
               
chr3:54739870-54740203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
27-318
               

               
Cow position:
               
chr3:34270929-34270655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
27-332
               

               
Cow position:
               
chr3:49218302-49218597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
27-415
               

               
Cow position:
               
chr3:18067151-18066769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
29-187
               

               
Cow position:
               
chr3:71238485-71238332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr3:24872721-24872531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
29-276
               

               
Cow position:
               
chr3:15192596-15192329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 111
               

               
Conread position:
               
29-326
               

               
Cow position:
               
chr3:65800602-65800311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
29-344
               

               
Cow position:
               
chr3:80581672-80581369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
29-350
               

               
Cow position:
               
chr3:42594642-42594967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
29-415
               

               
Cow position:
               
chr3:80081803-80082182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
63, 184
               

               
Conread position:
               
30-240
               

               
Cow position:
               
chr3:3638194-3637992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 64
               

               
Conread position:
               
30-240
               

               
Cow position:
               
chr3:66883931-66884135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
30-288
               

               
Cow position:
               
chr3:8061138-8060886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
30-310
               

               
Cow position:
               
chr3:45648144-45647871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr3:69849498-69849777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr3:68582995-68583278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr3:73764186-73764469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr3:8147658-8147954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
31-290
               

               
Cow position:
               
chr3:80740574-80740324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr3:23877005-23876722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 56
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr3:56703843-56704130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr3:59515111-59514835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
32-334
               

               
Cow position:
               
chr3:29360139-29360427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
179, 56
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr3:9843592-9843292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
34-352
               

               
Cow position:
               
chr3:31933090-31933412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
35-218
               

               
Cow position:
               
chr3:23920425-23920602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
35-258
               

               
Cow position:
               
chr3:34556229-34556455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
56, 50
               

               
Conread position:
               
35-296
               

               
Cow position:
               
chr3:28692422-28692684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
35-311
               

               
Cow position:
               
chr3:17450935-17451203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
195, 57
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr3:84000617-84000326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 52
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr3:54862408-54862738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
35-360
               

               
Cow position:
               
chr3:17895848-17895536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
36-245
               

               
Cow position:
               
chr3:15859663-15859865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
37-240
               

               
Cow position:
               
chr3:21693951-21693751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
37-346
               

               
Cow position:
               
chr3:4031976-4031664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 55
               

               
Conread position:
               
38-209
               

               
Cow position:
               
chr3:77729457-77729289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
38-245
               

               
Cow position:
               
chr3:7940552-7940755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
38-304
               

               
Cow position:
               
chr3:18393393-18393646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
38-325
               

               
Cow position:
               
chr3:62884209-62883919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
39-330
               

               
Cow position:
               
chr3:364212-364507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
39-415
               

               
Cow position:
               
chr3:20802620-20802993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
41-318
               

               
Cow position:
               
chr3:42483906-42483624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr3:53192430-53192591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
43-318
               

               
Cow position:
               
chr3:44622890-44623173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
43-326
               

               
Cow position:
               
chr3:46160849-46161129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
43-331
               

               
Cow position:
               
chr3:1133081-1133384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
43-332
               

               
Cow position:
               
chr3:57553852-57554137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
43-415
               

               
Cow position:
               
chr3:27544339-27544699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 6
               

               
Conread position:
               
44-315
               

               
Cow position:
               
chr3:79207991-79208276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
44-317
               

               
Cow position:
               
chr3:2392967-2393241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
44-318
               

               
Cow position:
               
chr3:74409480-74409219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
44-357
               

               
Cow position:
               
chr3:78894330-78894629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
45-332
               

               
Cow position:
               
chr3:61678699-61678401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
46-235
               

               
Cow position:
               
chr3:25060073-25059888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
46-291
               

               
Cow position:
               
chr3:44534766-44535015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
46-318
               

               
Cow position:
               
chr3:67161937-67161656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chr3:21050845-21051060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
47-291
               

               
Cow position:
               
chr3:59271535-59271302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr3:24304923-24305181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr3:63860897-63861177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr3:82657095-82657361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
47-326
               

               
Cow position:
               
chr3:41366988-41367267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
47-415
               

               
Cow position:
               
chr3:6265509-6265141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
48-301
               

               
Cow position:
               
chr3:8604026-8604273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
49-253
               

               
Cow position:
               
chr3:59885383-59885178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
49-307
               

               
Cow position:
               
chr3:13577187-13577449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
49-318
               

               
Cow position:
               
chr3:81940248-81939975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
50-326
               

               
Cow position:
               
chr3:59597181-59596920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
51-256
               

               
Cow position:
               
chr3:3062556-3062348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
55-261
               

               
Cow position:
               
chr3:55062887-55063087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
55-296
               

               
Cow position:
               
chr3:48578825-48578587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
55-315
               

               
Cow position:
               
chr3:17952642-17952383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr3:47284820-47284562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr3:49731655-49731913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr3:29813229-29812952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr3:68648149-68647870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
55-340
               

               
Cow position:
               
chr3:30701294-30701022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
55-341
               

               
Cow position:
               
chr3:73590010-73590296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
55-352
               

               
Cow position:
               
chr3:45744686-45744403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
55-415
               

               
Cow position:
               
chr3:2903309-2903663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
56-202
               

               
Cow position:
               
chr3:27247206-27247346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
56-227
               

               
Cow position:
               
chr3:16891295-16891117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
56-236
               

               
Cow position:
               
chr3:27212347-27212172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
56-291
               

               
Cow position:
               
chr3:49787397-49787157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
56-307
               

               
Cow position:
               
chr3:49231001-49230746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
56-318
               

               
Cow position:
               
chr3:5899808-5899550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
56-328
               

               
Cow position:
               
chr3:30418119-30417843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
57-301
               

               
Cow position:
               
chr3:4087177-4087425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
57-317
               

               
Cow position:
               
chr3:81371630-81371381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
57-318
               

               
Cow position:
               
chr3:19789132-19789395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
57-325
               

               
Cow position:
               
chr3:77496811-77496534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
57-327
               

               
Cow position:
               
chr3:2396797-2397068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
58-353
               

               
Cow position:
               
chr3:78945850-78946150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
58-415
               

               
Cow position:
               
chr3:20663545-20663903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
62-318
               

               
Cow position:
               
chr3:55460519-55460777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
62-326
               

               
Cow position:
               
chr3:34315977-34316248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
62-346
               

               
Cow position:
               
chr3:23945079-23944793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
63-305
               

               
Cow position:
               
chr3:2008247-2008006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
64-243
               

               
Cow position:
               
chr3:57789608-57789431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
64-318
               

               
Cow position:
               
chr3:31903122-31903384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
65-254
               

               
Cow position:
               
chr3:65381124-65380946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
67-333
               

               
Cow position:
               
chr3:58951587-58951330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
72-328
               

               
Cow position:
               
chr3:16004015-16004272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
73-333
               

               
Cow position:
               
chr3:18763862-18763603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
74-332
               

               
Cow position:
               
chr3:27286203-27285935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
74-332
               

               
Cow position:
               
chr3:78201241-78200977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
79-326
               

               
Cow position:
               
chr3:33252907-33253166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 242
               

               
Conread position:
               
80-243
               

               
Cow position:
               
chr3:78739821-78739664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
80-405
               

               
Cow position:
               
chr3:82360006-82359678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
82-405
               

               
Cow position:
               
chr3:13118303-13117992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
82-414
               

               
Cow position:
               
chr3:19717127-19717454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
83-279
               

               
Cow position:
               
chr3:80922538-80922331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
83-318
               

               
Cow position:
               
chr3:74234154-74233924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
83-332
               

               
Cow position:
               
chr3:30358673-30358924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
83-332
               

               
Cow position:
               
chr3:45534333-45534589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
84-288
               

               
Cow position:
               
chr3:55835862-55836075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr3:32399293-32399531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
84-332
               

               
Cow position:
               
chr3:72777215-72776950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
84-333
               

               
Cow position:
               
chr3:53790576-53790835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
84-415
               

               
Cow position:
               
chr3:49793355-49793048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
84-415
               

               
Cow position:
               
chr3:61190965-61191282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
85-336
               

               
Cow position:
               
chr3:73777245-73776984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
86-331
               

               
Cow position:
               
chr3:31501309-31501064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
87-290
               

               
Cow position:
               
chr3:15752675-15752876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
87-314
               

               
Cow position:
               
chr3:4332325-4332091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
87-332
               

               
Cow position:
               
chr3:48363036-48362793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
87-338
               

               
Cow position:
               
chr3:79148311-79148572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
87-350
               

               
Cow position:
               
chr3:19006618-19006359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
88-296
               

               
Cow position:
               
chr3:45307891-45307680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
88-328
               

               
Cow position:
               
chr3:67044140-67044381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
88-331
               

               
Cow position:
               
chr3:19198634-19198392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
88-412
               

               
Cow position:
               
chr3:58174865-58174531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr3:45690913-45691141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
89-332
               

               
Cow position:
               
chr3:78077147-78076899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
89-358
               

               
Cow position:
               
chr3:32870105-32869833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
91-290
               

               
Cow position:
               
chr3:74088213-74088422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr3:70467870-70468079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr3:16547632-16547386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
92-279
               

               
Cow position:
               
chr3:77006446-77006268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr3:3164540-3164772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr3:23408397-23408618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
92-332
               

               
Cow position:
               
chr3:62826664-62826913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
92-333
               

               
Cow position:
               
chr3:35975153-35975396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
92-333
               

               
Cow position:
               
chr3:59630547-59630791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
92-368
               

               
Cow position:
               
chr3:77467891-77467606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
92-415
               

               
Cow position:
               
chr3:6853551-6853868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
92-415
               

               
Cow position:
               
chr3:75727629-75727954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 252
               

               
Conread position:
               
92-415
               

               
Cow position:
               
chr3:84153276-84152950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
93-415
               

               
Cow position:
               
chr3:15057656-15057975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
95-240
               

               
Cow position:
               
chr3:10173181-10173325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
95-291
               

               
Cow position:
               
chr3:2680468-2680262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
95-415
               

               
Cow position:
               
chr3:59588470-59588154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
96-264
               

               
Cow position:
               
chr3:60265292-60265458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
96-291
               

               
Cow position:
               
chr3:7365933-7366124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
96-296
               

               
Cow position:
               
chr3:58158520-58158721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
96-326
               

               
Cow position:
               
chr3:69750752-69750985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
96-332
               

               
Cow position:
               
chr3:11020073-11019828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
97-296
               

               
Cow position:
               
chr3:16333749-16333552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
97-307
               

               
Cow position:
               
chr3:49337673-49337465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
97-326
               

               
Cow position:
               
chr3:58285949-58286182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
98-330
               

               
Cow position:
               
chr3:22872098-22872340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
98-350
               

               
Cow position:
               
chr3:43007453-43007714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
99-279
               

               
Cow position:
               
chr3:29334565-29334751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr3:7678614-7678397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr3:42588303-42588073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
100-355
               

               
Cow position:
               
chr3:15158990-15158728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
101-296
               

               
Cow position:
               
chr3:26970773-26970571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr3:66116165-66116401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 202
               

               
Conread position:
               
102-318
               

               
Cow position:
               
chr3:83921142-83920922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
103-279
               

               
Cow position:
               
chr3:4861627-4861452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
103-317
               

               
Cow position:
               
chr3:56704600-56704812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
104-318
               

               
Cow position:
               
chr3:15661757-15661977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
104-328
               

               
Cow position:
               
chr3:25691697-25691463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
105-318
               

               
Cow position:
               
chr3:52418888-52418689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
105-332
               

               
Cow position:
               
chr3:20129886-20129651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
105-332
               

               
Cow position:
               
chr3:51604663-51604897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
105-413
               

               
Cow position:
               
chr3:31419643-31419333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
105-415
               

               
Cow position:
               
chr3:28675932-28675624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 236
               

               
Conread position:
               
105-415
               

               
Cow position:
               
chr3:79591940-79592253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 247
               

               
Conread position:
               
106-277
               

               
Cow position:
               
chr3:17447671-17447843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
106-287
               

               
Cow position:
               
chr3:30055506-30055691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
106-307
               

               
Cow position:
               
chr3:61467550-61467340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
106-317
               

               
Cow position:
               
chr3:55445303-55445092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
106-318
               

               
Cow position:
               
chr3:59208755-59208538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr3:2630735-2630508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
106-335
               

               
Cow position:
               
chr3:23476943-23476706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
107-311
               

               
Cow position:
               
chr3:35283150-35283366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 204
               

               
Conread position:
               
107-332
               

               
Cow position:
               
chr3:11949416-11949643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
108-326
               

               
Cow position:
               
chr3:75711250-75711035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
108-333
               

               
Cow position:
               
chr3:31298214-31298451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr3:66978774-66978553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
110-332
               

               
Cow position:
               
chr3:522643-522435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
112-291
               

               
Cow position:
               
chr3:26894596-26894412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr3:23270031-23269848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
114-328
               

               
Cow position:
               
chr3:82473991-82473765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
115-264
               

               
Cow position:
               
chr3:61361338-61361186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 147
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr3:55117035-55117261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
117-415
               

               
Cow position:
               
chr3:58383896-58383597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
117-415
               

               
Cow position:
               
chr3:70129881-70130185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
119-331
               

               
Cow position:
               
chr3:51012606-51012822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
121-307
               

               
Cow position:
               
chr3:55971152-55970960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
121-318
               

               
Cow position:
               
chr3:18855021-18854817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
121-358
               

               
Cow position:
               
chr3:56102362-56102122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
121-410
               

               
Cow position:
               
chr3:53222715-53223008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
122-317
               

               
Cow position:
               
chr3:51609746-51609541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr3:70913154-70913347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
124-328
               

               
Cow position:
               
chr3:53904102-53903900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
124-346
               

               
Cow position:
               
chr3:55815261-55815040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
127-309
               

               
Cow position:
               
chr3:59701929-59701746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
131-318
               

               
Cow position:
               
chr3:34392181-34392372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 172
               

               
Conread position:
               
133-350
               

               
Cow position:
               
chr3:15079156-15079376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
134-415
               

               
Cow position:
               
chr3:77276494-77276769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
137-318
               

               
Cow position:
               
chr3:23478146-23477959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
137-331
               

               
Cow position:
               
chr3:59392196-59392396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
138-342
               

               
Cow position:
               
chr3:66964392-66964593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
141-432
               

               
Cow position:
               
chr3:24639498-24639208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 164
               

               
Conread position:
               
142-317
               

               
Cow position:
               
chr3:83369221-83369047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
143-318
               

               
Cow position:
               
chr3:18607275-18607092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
149-324
               

               
Cow position:
               
chr3:36656872-36657052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
151-334
               

               
Cow position:
               
chr3:22716385-22716573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
152-316
               

               
Cow position:
               
chr3:75164016-75164184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
152-318
               

               
Cow position:
               
chr3:9116795-9116631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
152-332
               

               
Cow position:
               
chr3:12670802-12670983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
155-316
               

               
Cow position:
               
chr3:84368481-84368643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
155-318
               

               
Cow position:
               
chr3:66885143-66885314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
156-318
               

               
Cow position:
               
chr3:61262694-61262527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
156-396
               

               
Cow position:
               
chr3:71104735-71104487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
158-415
               

               
Cow position:
               
chr3:9676461-9676713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
159-332
               

               
Cow position:
               
chr3:68514672-68514839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
164-344
               

               
Cow position:
               
chr3:20993487-20993314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
167-333
               

               
Cow position:
               
chr3:45333719-45333891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
169-350
               

               
Cow position:
               
chr3:42914332-42914145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
169-357
               

               
Cow position:
               
chr3:37289350-37289545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
173-332
               

               
Cow position:
               
chr3:48530510-48530348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 153
               

               
Conread position:
               
175-294
               

               
Cow position:
               
chr3:60389506-60389384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
179-364
               

               
Cow position:
               
chr3:16886010-16886201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 124
               

               
Conread position:
               
181-352
               

               
Cow position:
               
chr3:19822107-19822276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
186-332
               

               
Cow position:
               
chr3:83988340-83988191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
198-343
               

               
Cow position:
               
chr3:49784159-49784010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               
Show alignments to all cow chromosomes.