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Cow genome map

           
Conread name:
           
Tra1-TCH01A110102
        

               
Conread position:
               
1-215
               

               
Cow position:
               
chr5:37255245-37255451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr5:18289212-18288995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr5:46512679-46512908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr5:36255167-36255417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 91
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr5:37808574-37808848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr5:22643142-22643409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr5:6572834-6572546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr5:37425832-37425519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr5:12149636-12149319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr5:32696733-32697040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr5:38833211-38832890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr5:40889207-40889511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr5:47870953-47871278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr5:52000307-51999992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 34
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr5:27179747-27179413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr5:55966790-55967124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr5:69337910-69337586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr5:458578-458215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr5:25899783-25900130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
162, 77
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr5:28224542-28224144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr5:18574262-18573854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr5:53842384-53841968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr5:65593958-65593561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr5:34192993-34192794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr5:3771932-3771619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr5:42064291-42063976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
133, 90
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr5:50723132-50722809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
144, 83
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr5:1343768-1344107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr5:34168048-34167815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr5:72564849-72564538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr5:29097451-29097213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 86
               

               
Conread position:
               
7-179
               

               
Cow position:
               
chr5:28035825-28035656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
7-184
               

               
Cow position:
               
chr5:57526842-57527007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 58
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr5:60747198-60747404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr5:55955990-55955760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr5:11539968-11540208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
7-258
               

               
Cow position:
               
chr5:39181834-39182075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr5:23168744-23169021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr5:51053567-51053853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr5:27306386-27306093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 54
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr5:51503086-51502787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr5:12709967-12709659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr5:20779316-20779607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr5:28945978-28946286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr5:31640507-31640200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 92
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr5:41636950-41636646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr5:53055479-53055780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 97
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr5:61840270-61839961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr5:71454530-71454828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr5:53855788-53855463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
7-334
               

               
Cow position:
               
chr5:57626872-57626566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
218, 38
               

               
Conread position:
               
7-335
               

               
Cow position:
               
chr5:56467773-56467460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr5:67243999-67243673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 32
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr5:22839391-22839729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
7-405
               

               
Cow position:
               
chr5:23140507-23140884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
174, 43
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr5:27007979-27007580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr5:41129824-41129438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
323, 75
               

               
Conread position:
               
7-434
               

               
Cow position:
               
chr5:50821865-50821453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
8-202
               

               
Cow position:
               
chr5:6890939-6891125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr5:35459213-35459446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr5:58320389-58320664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr5:4617447-4617157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
8-309
               

               
Cow position:
               
chr5:32140627-32140925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr5:13537220-13536930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr5:41302997-41303318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr5:46798325-46798025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
8-322
               

               
Cow position:
               
chr5:31434368-31434035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 148
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr5:34184305-34183983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
8-332
               

               
Cow position:
               
chr5:16206075-16206383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
8-415
               

               
Cow position:
               
chr5:28248254-28247860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
8-415
               

               
Cow position:
               
chr5:40711358-40711768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
9-96
               

               
Cow position:
               
chr5:33552343-33552430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr5:47323542-47323375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr5:50575864-50575693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 87
               

               
Conread position:
               
9-192
               

               
Cow position:
               
chr5:59873000-59873187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr5:56635975-56635793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
172, 69
               

               
Conread position:
               
9-204
               

               
Cow position:
               
chr5:35126135-35125945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr5:19523980-19523787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr5:23678622-23678814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr5:12901997-12901800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr5:13717489-13717687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr5:54767829-54768042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr5:991544-991332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr5:14473324-14473550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 213
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr5:16214767-16214547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-235
               

               
Cow position:
               
chr5:67540121-67540343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr5:14629730-14629958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr5:35247030-35247256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
9-242
               

               
Cow position:
               
chr5:66582042-66581816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr5:23366684-23366915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr5:69520971-69520740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
9-245
               

               
Cow position:
               
chr5:71494901-71494667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
172, 86
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr5:32672985-32673213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr5:45397650-45397419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr5:54060356-54060110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
9-258
               

               
Cow position:
               
chr5:30949835-30950087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-261
               

               
Cow position:
               
chr5:56014811-56014564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
232, 84
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr5:59115462-59115208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr5:41713376-41713136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr5:62638984-62638732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
9-273
               

               
Cow position:
               
chr5:55929024-55928760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
9-274
               

               
Cow position:
               
chr5:5855938-5855696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
130, 74
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr5:47547642-47547904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr5:4221058-4220792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr5:7044625-7044899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr5:4710072-4710336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
223, 21
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr5:11427153-11427444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-293
               

               
Cow position:
               
chr5:26262599-26262876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 16
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr5:18899055-18898778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr5:29213018-29212743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr5:48154385-48154685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr5:35969612-35969329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
230, 46
               

               
Conread position:
               
9-309
               

               
Cow position:
               
chr5:62142756-62142452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-312
               

               
Cow position:
               
chr5:4280528-4280243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
9-314
               

               
Cow position:
               
chr5:3204910-3204612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
9-314
               

               
Cow position:
               
chr5:44049778-44049482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr5:5257208-5257522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr5:26476938-26477218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr5:44847941-44848242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr5:54086618-54086315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr5:64758687-64758993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 84
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr5:72173107-72172798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr5:26094086-26094395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
165, 69
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr5:58856182-58855878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:5938402-5938097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:7193499-7193205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
233, 70
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:11229594-11229901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:15426618-15426301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:15598155-15598461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:16509186-16508869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:16937942-16938235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:20128132-20127827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:21617538-21617228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:24349187-24348884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:26595023-26595330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 65
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:28302663-28302967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:28926100-28926412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:30302971-30302671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:30845190-30844885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
223, 20
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:31481228-31480926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 93
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:34638964-34638658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:35208341-35208034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:36868817-36868518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
172, 83
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:43929656-43929961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:46122273-46122576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:46509785-46510095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:56070939-56070626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:61576625-61576312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:63987366-63987674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
9-318
               

               
Cow position:
               
chr5:64137336-64137024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr5:41951016-41951317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
132, 64
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr5:20783698-20783394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
231, 29
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr5:37757758-37758038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr5:46322723-46323046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr5:65588779-65588477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
9-327
               

               
Cow position:
               
chr5:17063001-17063330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
9-327
               

               
Cow position:
               
chr5:29353045-29353365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
9-328
               

               
Cow position:
               
chr5:55068786-55068480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 96
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr5:30253821-30253507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr5:41165168-41164850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 84
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr5:32394679-32394357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr5:50637901-50637590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr5:62107406-62107735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:3281915-3281590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:29771608-29771277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:29828127-29827812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:34528627-34528320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:42845513-42845841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:55756338-55756683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:57935028-57935355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:59082114-59082433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
9-332
               

               
Cow position:
               
chr5:64321834-64321507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr5:44752227-44752552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr5:37646463-37646795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr5:64523783-64524123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr5:34050198-34049865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr5:43858340-43858672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr5:44796653-44796962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr5:31918722-31918404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
179, 17
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr5:53835797-53835464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr5:43992404-43992067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 91
               

               
Conread position:
               
9-398
               

               
Cow position:
               
chr5:63964089-63964480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
176, 70
               

               
Conread position:
               
9-411
               

               
Cow position:
               
chr5:67932392-67932776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
208, 28
               

               
Conread position:
               
9-412
               

               
Cow position:
               
chr5:54311416-54311010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 81
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:6528763-6528364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:19813140-19813536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
106, 79
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:27102714-27103107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:31144707-31145098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:37646154-37645749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:39447455-39447851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 83
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:40356766-40357203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 270
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:45845611-45846009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
224, 82
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:47313553-47313157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:47316894-47317284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:47601892-47601495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:51151274-51151679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:52645000-52645396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:60715288-60715671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
183, 20
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr5:65776305-65776708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
9-432
               

               
Cow position:
               
chr5:32378922-32378539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr5:49474466-49474659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr5:62985603-62985384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr5:39875203-39874979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr5:72951923-72951688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 96
               

               
Conread position:
               
10-257
               

               
Cow position:
               
chr5:30629080-30629324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr5:69731579-69731320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr5:56518143-56518409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr5:39094629-39094326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
10-325
               

               
Cow position:
               
chr5:26990469-26990159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
10-331
               

               
Cow position:
               
chr5:61726044-61725730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
10-332
               

               
Cow position:
               
chr5:50482781-50483103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
10-364
               

               
Cow position:
               
chr5:58144525-58144880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
10-413
               

               
Cow position:
               
chr5:34463499-34463903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
11-194
               

               
Cow position:
               
chr5:55019370-55019194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
11-202
               

               
Cow position:
               
chr5:18553975-18553793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr5:58446885-58446693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr5:29844358-29844138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr5:44446787-44447008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr5:65883694-65883924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
11-245
               

               
Cow position:
               
chr5:54090114-54089893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
11-247
               

               
Cow position:
               
chr5:44673780-44673531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
11-267
               

               
Cow position:
               
chr5:50600125-50599877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
221, 69
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr5:7552338-7552598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-289
               

               
Cow position:
               
chr5:50943079-50943352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
219, 62
               

               
Conread position:
               
11-290
               

               
Cow position:
               
chr5:9390631-9390336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
11-293
               

               
Cow position:
               
chr5:57737177-57736912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
11-304
               

               
Cow position:
               
chr5:6503803-6504093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
170, 77
               

               
Conread position:
               
11-311
               

               
Cow position:
               
chr5:7723743-7723452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
170, 73
               

               
Conread position:
               
11-311
               

               
Cow position:
               
chr5:22242689-22243005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chr5:740862-741174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr5:32153241-32153542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr5:14903990-14904294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr5:27419651-27419948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr5:43737885-43738175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
129, 62
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr5:61488033-61488338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr5:65765051-65765339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
122, 70
               

               
Conread position:
               
11-318
               

               
Cow position:
               
chr5:75436808-75437124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
11-325
               

               
Cow position:
               
chr5:9089945-9090257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chr5:16893693-16894011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr5:48573693-48573998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
11-328
               

               
Cow position:
               
chr5:65752938-65752618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
11-331
               

               
Cow position:
               
chr5:65601535-65601220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
175, 95
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr5:14550506-14550827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr5:31469515-31469824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
11-338
               

               
Cow position:
               
chr5:54350283-54350608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
11-340
               

               
Cow position:
               
chr5:39695730-39695408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
11-348
               

               
Cow position:
               
chr5:73080283-73079955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
11-350
               

               
Cow position:
               
chr5:31660579-31660897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
170, 68
               

               
Conread position:
               
11-412
               

               
Cow position:
               
chr5:15479204-15478795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr5:34441702-34442109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr5:39937193-39936787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
11-416
               

               
Cow position:
               
chr5:62172490-62172089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
12-275
               

               
Cow position:
               
chr5:6670116-6670382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
12-328
               

               
Cow position:
               
chr5:41604701-41604372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
12-339
               

               
Cow position:
               
chr5:40927909-40928221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 37
               

               
Conread position:
               
13-334
               

               
Cow position:
               
chr5:41334680-41334358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
14-240
               

               
Cow position:
               
chr5:21920455-21920226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
14-240
               

               
Cow position:
               
chr5:66972504-66972282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr5:51935265-51935009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
14-291
               

               
Cow position:
               
chr5:40039695-40039971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr5:52165102-52165409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
14-318
               

               
Cow position:
               
chr5:55942304-55942625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr5:14154223-14153905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr5:58793532-58793855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr5:35826677-35826349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
14-342
               

               
Cow position:
               
chr5:58229771-58229452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
14-415
               

               
Cow position:
               
chr5:2309481-2309896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
14-415
               

               
Cow position:
               
chr5:56524249-56523858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
216, 99
               

               
Conread position:
               
16-202
               

               
Cow position:
               
chr5:21535038-21535221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
16-240
               

               
Cow position:
               
chr5:50972599-50972385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 18
               

               
Conread position:
               
16-277
               

               
Cow position:
               
chr5:68329915-68330169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
223, 63
               

               
Conread position:
               
16-285
               

               
Cow position:
               
chr5:50215488-50215753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
16-314
               

               
Cow position:
               
chr5:48758012-48757721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
217, 13
               

               
Conread position:
               
16-317
               

               
Cow position:
               
chr5:40387800-40388092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr5:10261161-10261464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
16-340
               

               
Cow position:
               
chr5:41598638-41598945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
214, 63
               

               
Conread position:
               
16-352
               

               
Cow position:
               
chr5:55089214-55088885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
16-415
               

               
Cow position:
               
chr5:45940536-45940929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
17-318
               

               
Cow position:
               
chr5:32956023-32956317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
17-318
               

               
Cow position:
               
chr5:45225741-45226051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 254
               

               
Conread position:
               
18-240
               

               
Cow position:
               
chr5:54154320-54154533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr5:48143713-48144024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr5:32975483-32975778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr5:34885093-34885383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 64
               

               
Conread position:
               
19-318
               

               
Cow position:
               
chr5:41609354-41609078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
223, 18
               

               
Conread position:
               
20-221
               

               
Cow position:
               
chr5:56680320-56680121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
20-245
               

               
Cow position:
               
chr5:71723144-71722915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr5:28957545-28957790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
161, 70
               

               
Conread position:
               
20-311
               

               
Cow position:
               
chr5:72286846-72287131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
119, 63
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr5:20554685-20554976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr5:33414339-33414632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr5:56820192-56820487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr5:74858644-74858346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
20-333
               

               
Cow position:
               
chr5:30487311-30487006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
20-338
               

               
Cow position:
               
chr5:49685202-49685528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
20-344
               

               
Cow position:
               
chr5:21964358-21964038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
20-415
               

               
Cow position:
               
chr5:66815502-66815897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
21-210
               

               
Cow position:
               
chr5:49440803-49440987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
21-277
               

               
Cow position:
               
chr5:34562085-34561822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chr5:45804128-45803847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
21-305
               

               
Cow position:
               
chr5:57575841-57575552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
21-316
               

               
Cow position:
               
chr5:5111006-5111302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
118, 58
               

               
Conread position:
               
21-318
               

               
Cow position:
               
chr5:14314596-14314295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
21-331
               

               
Cow position:
               
chr5:13691499-13691816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 86
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr5:6045364-6045045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
21-332
               

               
Cow position:
               
chr5:66366578-66366290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
21-339
               

               
Cow position:
               
chr5:40109561-40109253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
118, 70
               

               
Conread position:
               
21-352
               

               
Cow position:
               
chr5:42744854-42744536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 65
               

               
Conread position:
               
21-354
               

               
Cow position:
               
chr5:37814694-37814360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
21-414
               

               
Cow position:
               
chr5:21828936-21828541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
22-289
               

               
Cow position:
               
chr5:75230734-75230485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chr5:28456338-28456612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
22-319
               

               
Cow position:
               
chr5:64823244-64823541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
117, 66
               

               
Conread position:
               
22-415
               

               
Cow position:
               
chr5:2500112-2500509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 71
               

               
Conread position:
               
23-240
               

               
Cow position:
               
chr5:29979916-29980127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
23-279
               

               
Cow position:
               
chr5:69461399-69461146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
207, 59
               

               
Conread position:
               
23-309
               

               
Cow position:
               
chr5:65941184-65941472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
207, 70
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr5:48829220-48828920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
158, 64
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr5:57074265-57074562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
23-325
               

               
Cow position:
               
chr5:24996156-24996458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
23-346
               

               
Cow position:
               
chr5:4031923-4032244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 69
               

               
Conread position:
               
23-414
               

               
Cow position:
               
chr5:359873-360259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
24-318
               

               
Cow position:
               
chr5:66339144-66338857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
24-332
               

               
Cow position:
               
chr5:9894058-9894368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
24-332
               

               
Cow position:
               
chr5:34505861-34506167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
220, 90
               

               
Conread position:
               
26-311
               

               
Cow position:
               
chr5:16025402-16025681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
208, 12
               

               
Conread position:
               
26-316
               

               
Cow position:
               
chr5:68081910-68082192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
26-317
               

               
Cow position:
               
chr5:3280809-3281094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
27-279
               

               
Cow position:
               
chr5:1678454-1678211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
27-318
               

               
Cow position:
               
chr5:28927523-28927820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
29-318
               

               
Cow position:
               
chr5:48224522-48224803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
30-210
               

               
Cow position:
               
chr5:59057680-59057866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
30-258
               

               
Cow position:
               
chr5:44028244-44028469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr5:41452606-41452844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
30-274
               

               
Cow position:
               
chr5:3639428-3639666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
30-293
               

               
Cow position:
               
chr5:3242418-3242676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
30-317
               

               
Cow position:
               
chr5:1247325-1247050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr5:1766290-1766572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr5:36855265-36854985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr5:54404831-54405122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
30-318
               

               
Cow position:
               
chr5:65886951-65887241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr5:21039919-21040212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
30-332
               

               
Cow position:
               
chr5:63840084-63840387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
30-367
               

               
Cow position:
               
chr5:34300978-34300649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
30-415
               

               
Cow position:
               
chr5:43923093-43923465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
31-331
               

               
Cow position:
               
chr5:26377612-26377907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
31-415
               

               
Cow position:
               
chr5:41531027-41531406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
31-415
               

               
Cow position:
               
chr5:54713673-54714058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
32-305
               

               
Cow position:
               
chr5:35235652-35235923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
33-318
               

               
Cow position:
               
chr5:27403173-27403471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
33-342
               

               
Cow position:
               
chr5:72903176-72903475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
34-237
               

               
Cow position:
               
chr5:51800917-51801112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
34-263
               

               
Cow position:
               
chr5:24485378-24485598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
35-307
               

               
Cow position:
               
chr5:49361938-49362207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
35-326
               

               
Cow position:
               
chr5:22934395-22934691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
37-415
               

               
Cow position:
               
chr5:37941737-37942109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
37-415
               

               
Cow position:
               
chr5:62826700-62827071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
38-230
               

               
Cow position:
               
chr5:47696390-47696574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
38-291
               

               
Cow position:
               
chr5:1027643-1027892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
38-317
               

               
Cow position:
               
chr5:18090789-18090501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
38-318
               

               
Cow position:
               
chr5:27015731-27015464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
199, 40
               

               
Conread position:
               
38-318
               

               
Cow position:
               
chr5:38683410-38683129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
38-415
               

               
Cow position:
               
chr5:44993989-44994361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 55
               

               
Conread position:
               
39-282
               

               
Cow position:
               
chr5:7140056-7140296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
39-318
               

               
Cow position:
               
chr5:4218918-4218650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
40-219
               

               
Cow position:
               
chr5:60448265-60448090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
40-306
               

               
Cow position:
               
chr5:8024144-8024407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
40-308
               

               
Cow position:
               
chr5:60126422-60126156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
40-318
               

               
Cow position:
               
chr5:34115702-34115435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
40-318
               

               
Cow position:
               
chr5:66831661-66831941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
40-332
               

               
Cow position:
               
chr5:41522753-41523034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
43-291
               

               
Cow position:
               
chr5:26790409-26790652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
43-360
               

               
Cow position:
               
chr5:37713848-37714174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
46-318
               

               
Cow position:
               
chr5:16185131-16184862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
46-335
               

               
Cow position:
               
chr5:61030179-61030473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
46-341
               

               
Cow position:
               
chr5:71505171-71504878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
193, 47
               

               
Conread position:
               
47-230
               

               
Cow position:
               
chr5:56334729-56334543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
47-240
               

               
Cow position:
               
chr5:19079171-19078969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
47-241
               

               
Cow position:
               
chr5:71579218-71579028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
47-296
               

               
Cow position:
               
chr5:43395107-43395343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
47-318
               

               
Cow position:
               
chr5:62678715-62678431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 262
               

               
Conread position:
               
47-326
               

               
Cow position:
               
chr5:49821182-49820907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
129, 36
               

               
Conread position:
               
48-296
               

               
Cow position:
               
chr5:8994524-8994771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
49-318
               

               
Cow position:
               
chr5:54064816-54064552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
49-416
               

               
Cow position:
               
chr5:694615-694264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
50-328
               

               
Cow position:
               
chr5:55176934-55176651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
52-200
               

               
Cow position:
               
chr5:56469785-56469931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
52-240
               

               
Cow position:
               
chr5:43816568-43816753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
52-277
               

               
Cow position:
               
chr5:17644617-17644842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
52-318
               

               
Cow position:
               
chr5:47888674-47888942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
55-192
               

               
Cow position:
               
chr5:29860385-29860250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
55-236
               

               
Cow position:
               
chr5:47721578-47721396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
55-318
               

               
Cow position:
               
chr5:23856124-23856389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
55-332
               

               
Cow position:
               
chr5:43474879-43474606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
55-415
               

               
Cow position:
               
chr5:64844085-64844433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
56-318
               

               
Cow position:
               
chr5:28324389-28324118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
56-318
               

               
Cow position:
               
chr5:50975935-50975660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
56-334
               

               
Cow position:
               
chr5:65924656-65924942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
56-415
               

               
Cow position:
               
chr5:6130387-6130040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
56-415
               

               
Cow position:
               
chr5:37377897-37377552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
57-318
               

               
Cow position:
               
chr5:50533352-50533611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
58-318
               

               
Cow position:
               
chr5:49559212-49558932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
62-318
               

               
Cow position:
               
chr5:56134937-56135196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
64-318
               

               
Cow position:
               
chr5:72150275-72150023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
64-333
               

               
Cow position:
               
chr5:59443223-59443493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
64-356
               

               
Cow position:
               
chr5:10789643-10789944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
65-240
               

               
Cow position:
               
chr5:53145859-53146028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
65-318
               

               
Cow position:
               
chr5:56433833-56433574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
69-318
               

               
Cow position:
               
chr5:14420320-14420572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
73-331
               

               
Cow position:
               
chr5:42677249-42676994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
73-352
               

               
Cow position:
               
chr5:9234051-9234342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 237
               

               
Conread position:
               
74-282
               

               
Cow position:
               
chr5:74019752-74019962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
74-289
               

               
Cow position:
               
chr5:33080769-33080987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
74-318
               

               
Cow position:
               
chr5:30638840-30639077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
74-332
               

               
Cow position:
               
chr5:51357478-51357745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
74-332
               

               
Cow position:
               
chr5:59297939-59298200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
79-296
               

               
Cow position:
               
chr5:57271247-57271470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
79-316
               

               
Cow position:
               
chr5:25495336-25495563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
79-415
               

               
Cow position:
               
chr5:39299548-39299212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
80-364
               

               
Cow position:
               
chr5:52438164-52437876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
81-307
               

               
Cow position:
               
chr5:5848170-5848403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
81-318
               

               
Cow position:
               
chr5:33661870-33661627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
81-415
               

               
Cow position:
               
chr5:35145365-35145034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
81-415
               

               
Cow position:
               
chr5:68481253-68480894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
83-250
               

               
Cow position:
               
chr5:41486726-41486896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr5:9859702-9859945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr5:17087011-17087257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
84-326
               

               
Cow position:
               
chr5:35763286-35763055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
84-327
               

               
Cow position:
               
chr5:64393170-64392918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
84-331
               

               
Cow position:
               
chr5:4506938-4507201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
84-333
               

               
Cow position:
               
chr5:28330317-28330574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
84-339
               

               
Cow position:
               
chr5:35684947-35684686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
85-254
               

               
Cow position:
               
chr5:64060282-64060457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
85-318
               

               
Cow position:
               
chr5:63992164-63992391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
85-415
               

               
Cow position:
               
chr5:7921391-7921698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
86-318
               

               
Cow position:
               
chr5:72006845-72007080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
86-332
               

               
Cow position:
               
chr5:14538650-14538890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
87-279
               

               
Cow position:
               
chr5:48009840-48010035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
87-356
               

               
Cow position:
               
chr5:50900909-50900643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
87-415
               

               
Cow position:
               
chr5:23640987-23641302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
89-311
               

               
Cow position:
               
chr5:14415782-14415553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr5:4631126-4630901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr5:51490752-51490981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
89-318
               

               
Cow position:
               
chr5:73253097-73252869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
89-326
               

               
Cow position:
               
chr5:74643663-74643896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
89-415
               

               
Cow position:
               
chr5:3442471-3442129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr5:26133081-26133301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr5:21525176-21524923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr5:6683348-6683575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
92-318
               

               
Cow position:
               
chr5:27690055-27690286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
92-328
               

               
Cow position:
               
chr5:20974442-20974681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
92-332
               

               
Cow position:
               
chr5:4797314-4797552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
93-318
               

               
Cow position:
               
chr5:6086556-6086789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
93-332
               

               
Cow position:
               
chr5:12351785-12352023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
93-332
               

               
Cow position:
               
chr5:50950559-50950312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
93-344
               

               
Cow position:
               
chr5:55989749-55989488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
94-342
               

               
Cow position:
               
chr5:34232744-34232492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
95-228
               

               
Cow position:
               
chr5:31020138-31020268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
95-318
               

               
Cow position:
               
chr5:57327797-57327561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
95-328
               

               
Cow position:
               
chr5:66257639-66257405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
96-318
               

               
Cow position:
               
chr5:27155025-27154795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
96-412
               

               
Cow position:
               
chr5:29505109-29504792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
98-311
               

               
Cow position:
               
chr5:41229704-41229492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
98-332
               

               
Cow position:
               
chr5:65932930-65933169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
98-335
               

               
Cow position:
               
chr5:44583130-44583362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
99-333
               

               
Cow position:
               
chr5:72035089-72035327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
100-256
               

               
Cow position:
               
chr5:39242202-39242355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
100-332
               

               
Cow position:
               
chr5:34916136-34915901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 202
               

               
Conread position:
               
100-346
               

               
Cow position:
               
chr5:26046331-26046079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 205
               

               
Conread position:
               
100-416
               

               
Cow position:
               
chr5:2332513-2332843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
101-293
               

               
Cow position:
               
chr5:45037016-45036819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr5:3825084-3824834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
101-468
               

               
Cow position:
               
chr5:66281401-66281034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
103-415
               

               
Cow position:
               
chr5:58519412-58519715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
104-318
               

               
Cow position:
               
chr5:42748149-42747931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
104-346
               

               
Cow position:
               
chr5:32963639-32963884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
105-332
               

               
Cow position:
               
chr5:45706036-45705806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
105-348
               

               
Cow position:
               
chr5:33467051-33467299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
106-237
               

               
Cow position:
               
chr5:19294499-19294628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
106-306
               

               
Cow position:
               
chr5:62026957-62027161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
106-318
               

               
Cow position:
               
chr5:6987153-6986931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
106-325
               

               
Cow position:
               
chr5:34288481-34288704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr5:3492185-3491960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
106-395
               

               
Cow position:
               
chr5:68604849-68604557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 198
               

               
Conread position:
               
106-415
               

               
Cow position:
               
chr5:26562146-26561828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
107-318
               

               
Cow position:
               
chr5:51076659-51076872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
107-318
               

               
Cow position:
               
chr5:60520151-60519939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
32, 137
               

               
Conread position:
               
107-342
               

               
Cow position:
               
chr5:70581907-70582149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
107-414
               

               
Cow position:
               
chr5:30816708-30816400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
108-318
               

               
Cow position:
               
chr5:72310693-72310487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
108-332
               

               
Cow position:
               
chr5:61600407-61600171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
108-356
               

               
Cow position:
               
chr5:56385218-56384962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 172
               

               
Conread position:
               
108-415
               

               
Cow position:
               
chr5:3058664-3058354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
115-317
               

               
Cow position:
               
chr5:63388775-63388568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
115-334
               

               
Cow position:
               
chr5:40759957-40759736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
118-318
               

               
Cow position:
               
chr5:19278722-19278919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
120-318
               

               
Cow position:
               
chr5:46103964-46104163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
121-335
               

               
Cow position:
               
chr5:61656580-61656362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
124-318
               

               
Cow position:
               
chr5:48178705-48178903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 154
               

               
Conread position:
               
125-415
               

               
Cow position:
               
chr5:39675481-39675759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
127-309
               

               
Cow position:
               
chr5:37366870-37366679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
127-330
               

               
Cow position:
               
chr5:19905298-19905517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr5:63917441-63917650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 175
               

               
Conread position:
               
128-264
               

               
Cow position:
               
chr5:45025950-45026091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
128-316
               

               
Cow position:
               
chr5:64176149-64176346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 179
               

               
Conread position:
               
129-326
               

               
Cow position:
               
chr5:44054068-44054273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
129-352
               

               
Cow position:
               
chr5:2851281-2851053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
131-293
               

               
Cow position:
               
chr5:35449217-35449051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
131-333
               

               
Cow position:
               
chr5:50729464-50729253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
131-334
               

               
Cow position:
               
chr5:26099406-26099613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
132-405
               

               
Cow position:
               
chr5:25225689-25225966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
133-327
               

               
Cow position:
               
chr5:12672069-12672262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
135-354
               

               
Cow position:
               
chr5:54530943-54530719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
136-307
               

               
Cow position:
               
chr5:15462674-15462498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
137-415
               

               
Cow position:
               
chr5:38853324-38853043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 208
               

               
Conread position:
               
138-291
               

               
Cow position:
               
chr5:20407710-20407867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
139-352
               

               
Cow position:
               
chr5:24642770-24642983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
146-356
               

               
Cow position:
               
chr5:24836997-24837205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
89, 149
               

               
Conread position:
               
149-350
               

               
Cow position:
               
chr5:62261812-62261612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
150-336
               

               
Cow position:
               
chr5:14703021-14703213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
150-352
               

               
Cow position:
               
chr5:33537833-33537629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
150-354
               

               
Cow position:
               
chr5:66297183-66296975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
151-364
               

               
Cow position:
               
chr5:6033184-6032965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
155-318
               

               
Cow position:
               
chr5:1104924-1105098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr5:41981336-41981160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr5:57156714-57156531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
156-358
               

               
Cow position:
               
chr5:34921892-34922102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
157-343
               

               
Cow position:
               
chr5:20691532-20691711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
161-340
               

               
Cow position:
               
chr5:28035644-28035461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
164-330
               

               
Cow position:
               
chr5:40595072-40595241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
165-332
               

               
Cow position:
               
chr5:39418855-39419024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
173-338
               

               
Cow position:
               
chr5:65325962-65325793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 101
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr5:4509417-4509218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
177-359
               

               
Cow position:
               
chr5:51360868-51360677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
181-331
               

               
Cow position:
               
chr5:19751758-19751612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
182-350
               

               
Cow position:
               
chr5:26541205-26541037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
182-356
               

               
Cow position:
               
chr5:9499176-9499358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
184-344
               

               
Cow position:
               
chr5:34923202-34923360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
185-364
               

               
Cow position:
               
chr5:31784795-31784614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr5:44735028-44735205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 130
               

               
Conread position:
               
224-360
               

               
Cow position:
               
chr5:57890366-57890230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
241-368
               

               
Cow position:
               
chr5:52162449-52162322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.