Cow genome map


           Conread name:
           Tra1-TCH01C100079
        

               Conread position:
               1-421
               

               Cow position:
               chr21:12056152-12055735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               1-453
               

               Cow position:
               chr21:1691010-1690543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               16-428
               

               Cow position:
               chr21:37044774-37045183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               100, 37
               

               Conread position:
               16-453
               

               Cow position:
               chr21:21945257-21944812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 40
               

               Conread position:
               38-420
               

               Cow position:
               chr21:4222805-4222422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 182
               

               Conread position:
               112-320
               

               Cow position:
               chr21:39086124-39086333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               108, 74
               

               Conread position:
               148-313
               

               Cow position:
               chr21:49323748-49323908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               648-860
               

               Cow position:
               chr21:21944590-21944373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               705-859
               

               Cow position:
               chr21:1690039-1689882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 103
               
Show alignments to all cow chromosomes.