Cow genome map


           Conread name:
           Tra1-TCH01C100079
        

               Conread position:
               1-231
               

               Cow position:
               chr9:35318145-35317921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               114, 61
               

               Conread position:
               1-401
               

               Cow position:
               chr9:31194596-31194195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               1-421
               

               Cow position:
               chr9:45473842-45473420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               1-448
               

               Cow position:
               chr9:9331152-9330698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 58
               

               Conread position:
               14-421
               

               Cow position:
               chr9:36724085-36724494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               38-430
               

               Cow position:
               chr9:4655042-4654654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 72
               

               Conread position:
               85-404
               

               Cow position:
               chr9:1076544-1076224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               640-813
               

               Cow position:
               chr9:3226756-3226578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               643-847
               

               Cow position:
               chr9:9330506-9330304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               649-860
               

               Cow position:
               chr9:45473131-45472916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 142
               
Show alignments to all cow chromosomes.