Cow genome map


           Conread name:
           Tra1-TCH01C100079
        

               Conread position:
               1-421
               

               Cow position:
               chrX:24088879-24089299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 223
               

               Conread position:
               1-453
               

               Cow position:
               chrX:3398362-3397909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 161
               

               Conread position:
               3-453
               

               Cow position:
               chrX:17250845-17250393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               14-321
               

               Cow position:
               chrX:33704734-33705036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               16-297
               

               Cow position:
               chrX:15252466-15252183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               97-421
               

               Cow position:
               chrX:18660209-18659885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               101-320
               

               Cow position:
               chrX:16223307-16223094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               107-311
               

               Cow position:
               chrX:22514574-22514371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               114-401
               

               Cow position:
               chrX:34344148-34344430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               647-860
               

               Cow position:
               chrX:17250181-17249959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               49, 80
               
Show alignments to all cow chromosomes.