Cow genome map
Conread name: | Utr1-UTR010047F01 |
Conread position: | 1-364 |
Cow position: | chr1:70388419-70388042 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 258 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 72, 128 |
Conread position: | 2-379 |
Cow position: | chr1:58169518-58169146 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 267 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 62, 29 |
Conread position: | 2-383 |
Cow position: | chr1:6197378-6196983 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 291 |
Conread position: | 2-383 |
Cow position: | chr1:18962829-18962436 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 32 |
Conread position: | 2-383 |
Cow position: | chr1:66490479-66490876 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 187 |
Conread position: | 2-383 |
Cow position: | chr1:77747643-77748038 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 134 |
Conread position: | 2-404 |
Cow position: | chr1:57744328-57743925 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 292 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 19 |
Conread position: | 2-428 |
Cow position: | chr1:80667103-80667558 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 314 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 78, 57 |
Conread position: | 2-429 |
Cow position: | chr1:81926287-81925837 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 124 |
Conread position: | 2-430 |
Cow position: | chr1:31253706-31253292 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 296 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 239, 18 |
Conread position: | 3-368 |
Cow position: | chr1:61332064-61331683 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 187 |
Conread position: | 3-383 |
Cow position: | chr1:38711611-38712007 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 37 |
Conread position: | 3-383 |
Cow position: | chr1:57363430-57363038 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 31 |
Conread position: | 3-383 |
Cow position: | chr1:82478883-82479278 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 187 |
Conread position: | 3-383 |
Cow position: | chr1:88178756-88179153 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 291 |
Conread position: | 3-383 |
Cow position: | chr1:90912727-90913124 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 3-404 |
Cow position: | chr1:25088774-25088356 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 12 |
Conread position: | 3-428 |
Cow position: | chr1:40483393-40482948 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 125 |
Conread position: | 3-428 |
Cow position: | chr1:51875903-51875473 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 297 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 61, 106 |
Conread position: | 3-428 |
Cow position: | chr1:54116153-54116589 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 28 |
Conread position: | 3-430 |
Cow position: | chr1:21431401-21430964 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 28 |
Conread position: | 3-430 |
Cow position: | chr1:23039994-23040434 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 216 |
Conread position: | 3-430 |
Cow position: | chr1:58196143-58195716 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 313 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 61, 15 |
Conread position: | 3-430 |
Cow position: | chr1:99864816-99865262 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 44 |
Conread position: | 4-346 |
Cow position: | chr1:57679464-57679102 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 255 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 64, 284 |
Conread position: | 4-383 |
Cow position: | chr1:40920040-40920433 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 264 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 60, 186 |
Conread position: | 4-422 |
Cow position: | chr1:33443259-33442832 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 27 |
Conread position: | 5-358 |
Cow position: | chr1:28650734-28650374 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 259 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 61, 105 |
Conread position: | 6-428 |
Cow position: | chr1:88267235-88266799 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 25 |
Conread position: | 10-356 |
Cow position: | chr1:31324483-31324139 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 222 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 82, 51 |
Conread position: | 15-431 |
Cow position: | chr1:55220618-55220164 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 269 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 43, 37 |
Conread position: | 62-407 |
Cow position: | chr1:95474926-95474582 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 238 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 174, 86 |
Conread position: | 63-382 |
Cow position: | chr1:63035586-63035916 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 234 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 179, 56 |
Conread position: | 65-382 |
Cow position: | chr1:19161934-19162262 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 230 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 112, 120 |
Conread position: | 79-424 |
Cow position: | chr1:77656526-77656882 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 239 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 9, 214 |
Conread position: | 82-371 |
Cow position: | chr1:18137449-18137154 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 202 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 36, 59 |
Conread position: | 91-377 |
Cow position: | chr1:25224425-25224135 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 191 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 113, 249 |
Conread position: | 101-422 |
Cow position: | chr1:62525888-62526209 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 220 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 150, 83 |
Conread position: | 103-376 |
Cow position: | chr1:67317706-67317993 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 217 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 84, 168 |
Conread position: | 106-430 |
Cow position: | chr1:25120261-25119932 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 16 |
Conread position: | 107-383 |
Cow position: | chr1:3970257-3969969 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 201 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 135, 186 |
Conread position: | 108-431 |
Cow position: | chr1:38383558-38383224 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 242 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 129, 34 |
Conread position: | 125-383 |
Cow position: | chr1:52355648-52355377 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 187 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 24, 165 |
Conread position: | 126-409 |
Cow position: | chr1:53519692-53519984 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 209 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 39, 61 |
Conread position: | 126-430 |
Cow position: | chr1:58218132-58218442 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 217 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 111, 19 |
Conread position: | 143-368 |
Cow position: | chr1:475221-475457 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 170 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 34, 42 |
Conread position: | 147-408 |
Cow position: | chr1:88027876-88028145 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 180 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 78, 26 |
Conread position: | 154-368 |
Cow position: | chr1:12468732-12468510 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 167 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 87, 24 |
Conread position: | 266-430 |
Cow position: | chr1:53487653-53487822 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 7, 20 |
Conread position: | 267-430 |
Cow position: | chr1:61536536-61536371 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 86, 19 |
Conread position: | 279-423 |
Cow position: | chr1:40534423-40534278 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 34, 8 |
Conread position: | 297-428 |
Cow position: | chr1:89263401-89263270 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 16, 25 |
Show alignments to all cow chromosomes.