Cow genome map

Conread name: Utr1-UTR010047F01

Conread position: 1-364
Cow position: chr1:70388419-70388042 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 72, 128

Conread position: 2-379
Cow position: chr1:58169518-58169146 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 62, 29

Conread position: 2-383
Cow position: chr1:6197378-6196983 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 291

Conread position: 2-383
Cow position: chr1:18962829-18962436 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 32

Conread position: 2-383
Cow position: chr1:66490479-66490876 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 187

Conread position: 2-383
Cow position: chr1:77747643-77748038 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 134

Conread position: 2-404
Cow position: chr1:57744328-57743925 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 19

Conread position: 2-428
Cow position: chr1:80667103-80667558 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 78, 57

Conread position: 2-429
Cow position: chr1:81926287-81925837 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 124

Conread position: 2-430
Cow position: chr1:31253706-31253292 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 296
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 239, 18

Conread position: 3-368
Cow position: chr1:61332064-61331683 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 187

Conread position: 3-383
Cow position: chr1:38711611-38712007 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 37

Conread position: 3-383
Cow position: chr1:57363430-57363038 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 3-383
Cow position: chr1:82478883-82479278 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 187

Conread position: 3-383
Cow position: chr1:88178756-88179153 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 291

Conread position: 3-383
Cow position: chr1:90912727-90913124 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 3-404
Cow position: chr1:25088774-25088356 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 3-428
Cow position: chr1:40483393-40482948 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 125

Conread position: 3-428
Cow position: chr1:51875903-51875473 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 106

Conread position: 3-428
Cow position: chr1:54116153-54116589 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 28

Conread position: 3-430
Cow position: chr1:21431401-21430964 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 28

Conread position: 3-430
Cow position: chr1:23039994-23040434 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 216

Conread position: 3-430
Cow position: chr1:58196143-58195716 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 15

Conread position: 3-430
Cow position: chr1:99864816-99865262 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 44

Conread position: 4-346
Cow position: chr1:57679464-57679102 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 284

Conread position: 4-383
Cow position: chr1:40920040-40920433 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 186

Conread position: 4-422
Cow position: chr1:33443259-33442832 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 27

Conread position: 5-358
Cow position: chr1:28650734-28650374 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 105

Conread position: 6-428
Cow position: chr1:88267235-88266799 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 25

Conread position: 10-356
Cow position: chr1:31324483-31324139 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 51

Conread position: 15-431
Cow position: chr1:55220618-55220164 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 269
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 37

Conread position: 62-407
Cow position: chr1:95474926-95474582 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 174, 86

Conread position: 63-382
Cow position: chr1:63035586-63035916 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 179, 56

Conread position: 65-382
Cow position: chr1:19161934-19162262 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 120

Conread position: 79-424
Cow position: chr1:77656526-77656882 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 9, 214

Conread position: 82-371
Cow position: chr1:18137449-18137154 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 36, 59

Conread position: 91-377
Cow position: chr1:25224425-25224135 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 113, 249

Conread position: 101-422
Cow position: chr1:62525888-62526209 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 83

Conread position: 103-376
Cow position: chr1:67317706-67317993 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 168

Conread position: 106-430
Cow position: chr1:25120261-25119932 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 16

Conread position: 107-383
Cow position: chr1:3970257-3969969 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 186

Conread position: 108-431
Cow position: chr1:38383558-38383224 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 34

Conread position: 125-383
Cow position: chr1:52355648-52355377 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 165

Conread position: 126-409
Cow position: chr1:53519692-53519984 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 61

Conread position: 126-430
Cow position: chr1:58218132-58218442 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 111, 19

Conread position: 143-368
Cow position: chr1:475221-475457 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 42

Conread position: 147-408
Cow position: chr1:88027876-88028145 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 26

Conread position: 154-368
Cow position: chr1:12468732-12468510 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 24

Conread position: 266-430
Cow position: chr1:53487653-53487822 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 20

Conread position: 267-430
Cow position: chr1:61536536-61536371 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 19

Conread position: 279-423
Cow position: chr1:40534423-40534278 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 8

Conread position: 297-428
Cow position: chr1:89263401-89263270 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 25

Show alignments to all cow chromosomes.