Cow genome map
| Conread name: | Utr1-UTR010047F01 |
| Conread position: | 2-383 |
| Cow position: | chr11:67863715-67863322 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 2-414 |
| Cow position: | chr11:40486722-40487143 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 2-414 |
| Cow position: | chr11:49237403-49236977 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 2-430 |
| Cow position: | chr11:3682274-3681834 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 165 |
| Conread position: | 2-430 |
| Cow position: | chr11:41101486-41101922 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 13 |
| Conread position: | 2-430 |
| Cow position: | chr11:67741473-67741018 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 3-351 |
| Cow position: | chr11:11591545-11591900 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 114 |
| Conread position: | 3-379 |
| Cow position: | chr11:81338825-81338442 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 3-383 |
| Cow position: | chr11:35738781-35738384 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 291 |
| Conread position: | 3-383 |
| Cow position: | chr11:57625615-57625232 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 61, 162 |
| Conread position: | 3-402 |
| Cow position: | chr11:18146984-18146568 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 187 |
| Conread position: | 3-430 |
| Cow position: | chr11:45652345-45651905 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 44 |
| Conread position: | 3-432 |
| Cow position: | chr11:8018333-8018775 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 43 |
| Conread position: | 5-347 |
| Cow position: | chr11:59601173-59601516 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 6-418 |
| Cow position: | chr11:21477175-21477582 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 17-413 |
| Cow position: | chr11:8551366-8551800 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 68-411 |
| Cow position: | chr11:60824406-60824759 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 174, 195 |
| Conread position: | 72-389 |
| Cow position: | chr11:28393512-28393841 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 170, 210 |
| Conread position: | 86-383 |
| Cow position: | chr11:76767067-76767375 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 211 |
| Conread position: | 86-414 |
| Cow position: | chr11:61426343-61426679 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 169, 302 |
| Conread position: | 88-414 |
| Cow position: | chr11:21471284-21471615 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 153, 219 |
| Conread position: | 100-400 |
| Cow position: | chr11:73466536-73466231 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 106-430 |
| Cow position: | chr11:40015847-40016178 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 87, 80 |
| Conread position: | 110-414 |
| Cow position: | chr11:2548159-2548474 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 132, 31 |
| Conread position: | 128-430 |
| Cow position: | chr11:8830076-8829765 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 114, 80 |
| Conread position: | 174-383 |
| Cow position: | chr11:41229262-41229044 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 116 |
| Conread position: | 180-430 |
| Cow position: | chr11:76960205-76960467 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 115 |
| Conread position: | 266-429 |
| Cow position: | chr11:42309343-42309174 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 22 |
Show alignments to all cow chromosomes.