Cow genome map
| Conread name: | Utr1-UTR010047F01 |
| Conread position: | 2-358 |
| Cow position: | chr3:11182172-11181814 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 2-365 |
| Cow position: | chr3:13466581-13466215 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 28 |
| Conread position: | 2-382 |
| Cow position: | chr3:66651551-66651168 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 2-414 |
| Cow position: | chr3:49335976-49336400 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 2-424 |
| Cow position: | chr3:54568803-54569242 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 298 |
| Conread position: | 2-428 |
| Cow position: | chr3:58952937-58953378 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 3-368 |
| Cow position: | chr3:48845782-48846163 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 187 |
| Conread position: | 3-376 |
| Cow position: | chr3:3837809-3837427 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 187 |
| Conread position: | 3-383 |
| Cow position: | chr3:16225657-16226048 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 3-383 |
| Cow position: | chr3:29129873-29130267 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 3-383 |
| Cow position: | chr3:37971820-37972207 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 187 |
| Conread position: | 3-383 |
| Cow position: | chr3:47078838-47078440 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 187 |
| Conread position: | 3-383 |
| Cow position: | chr3:49605663-49605269 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 187 |
| Conread position: | 3-383 |
| Cow position: | chr3:65177786-65178182 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 187 |
| Conread position: | 3-403 |
| Cow position: | chr3:39555808-39555395 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 3-404 |
| Cow position: | chr3:18353580-18353177 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 3-404 |
| Cow position: | chr3:72602984-72603407 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 3-430 |
| Cow position: | chr3:48096304-48095877 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 3-430 |
| Cow position: | chr3:75165314-75164849 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 230 |
| Conread position: | 5-383 |
| Cow position: | chr3:65988697-65989093 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 279 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 57, 212 |
| Conread position: | 5-430 |
| Cow position: | chr3:12253826-12254267 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 16-381 |
| Cow position: | chr3:50112231-50111855 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 35, 6 |
| Conread position: | 35-376 |
| Cow position: | chr3:28093944-28094302 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 63-408 |
| Cow position: | chr3:24530543-24530900 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 231 |
| Conread position: | 64-383 |
| Cow position: | chr3:42846195-42846517 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 184, 143 |
| Conread position: | 65-352 |
| Cow position: | chr3:22512159-22512451 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 176, 143 |
| Conread position: | 65-383 |
| Cow position: | chr3:73636724-73637053 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 112, 120 |
| Conread position: | 76-428 |
| Cow position: | chr3:72105808-72105443 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 223 |
| Conread position: | 86-409 |
| Cow position: | chr3:45311657-45311991 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 16 |
| Conread position: | 111-429 |
| Cow position: | chr3:22868077-22867746 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 29 |
| Conread position: | 128-430 |
| Cow position: | chr3:38496697-38497016 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 128-430 |
| Cow position: | chr3:54777840-54778157 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 161-389 |
| Cow position: | chr3:37021469-37021232 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 163-404 |
| Cow position: | chr3:46136133-46135879 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 133 |
| Conread position: | 242-428 |
| Cow position: | chr3:55894987-55895176 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 5 |
Show alignments to all cow chromosomes.