Cow genome map
| Conread name: | Utr1-UTR010047F01 |
| Conread position: | 1-383 |
| Cow position: | chr6:16703913-16703526 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 2-366 |
| Cow position: | chr6:41676754-41677131 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 94 |
| Conread position: | 2-376 |
| Cow position: | chr6:6720801-6721180 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 2-383 |
| Cow position: | chr6:7138521-7138124 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 188 |
| Conread position: | 2-383 |
| Cow position: | chr6:10044034-10044432 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 188 |
| Conread position: | 2-424 |
| Cow position: | chr6:6165466-6165905 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 3-369 |
| Cow position: | chr6:65875461-65875081 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 3-383 |
| Cow position: | chr6:45480256-45479871 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 278 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 63, 169 |
| Conread position: | 3-404 |
| Cow position: | chr6:6162950-6163369 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 299 |
| Conread position: | 42-429 |
| Cow position: | chr6:58880077-58880470 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 59-385 |
| Cow position: | chr6:47024921-47025256 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 177, 23 |
| Conread position: | 63-383 |
| Cow position: | chr6:18571693-18571367 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 227 |
| Conread position: | 68-425 |
| Cow position: | chr6:52245403-52245767 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 173, 44 |
| Conread position: | 94-376 |
| Cow position: | chr6:1105233-1104942 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 142, 74 |
| Conread position: | 100-388 |
| Cow position: | chr6:58072582-58072878 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 106-469 |
| Cow position: | chr6:49625761-49626136 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 145, 159 |
| Conread position: | 111-404 |
| Cow position: | chr6:41556268-41556567 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 128, 103 |
| Conread position: | 128-431 |
| Cow position: | chr6:15962963-15962654 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 131-430 |
| Cow position: | chr6:2087474-2087790 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 164 |
| Conread position: | 131-431 |
| Cow position: | chr6:16595939-16596251 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 166-424 |
| Cow position: | chr6:13405217-13405489 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 168-381 |
| Cow position: | chr6:47154403-47154627 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 173-390 |
| Cow position: | chr6:15181160-15181379 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 192-404 |
| Cow position: | chr6:26654128-26654346 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 214-430 |
| Cow position: | chr6:64252160-64252380 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 273-424 |
| Cow position: | chr6:40031156-40031313 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.