Cow genome map

Conread name: Utr1-UTR010050E01

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 322

Conread position: 1-485
Cow position:
Alignm length: 498
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 53

Conread position: 1-608
Cow position:
Alignm length: 628
Alignm identity: 391
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 108, 53

Conread position: 1-616
Cow position:
Alignm length: 648
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 59

Conread position: 1-664
Cow position:
Alignm length: 706
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 208

Conread position: 1-678
Cow position:
Alignm length: 708
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-678
Cow position:
Alignm length: 707
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 266

Conread position: 1-678
Cow position:
Alignm length: 704
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 1-689
Cow position:
Alignm length: 718
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 327

Conread position: 1-689
Cow position:
Alignm length: 725
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 252

Conread position: 1-689
Cow position:
Alignm length: 707
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 1-689
Cow position:
Alignm length: 719
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 49

Conread position: 1-689
Cow position:
Alignm length: 721
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-693
Cow position:
Alignm length: 720
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 210

Conread position: 1-716
Cow position:
Alignm length: 737
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 2-607
Cow position:
Alignm length: 632
Alignm identity: 409
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 98

Conread position: 2-689
Cow position:
Alignm length: 722
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 336

Conread position: 3-395
Cow position:
Alignm length: 405
Alignm identity: 256
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 201

Conread position: 3-402
Cow position:
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 307

Conread position: 3-455
Cow position:
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 182

Conread position: 3-477
Cow position:
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-477
Cow position:
Alignm length: 492
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-478
Cow position:
Alignm length: 497
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 78

Conread position: 3-479
Cow position:
Alignm length: 491
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 3-539
Cow position:
Alignm length: 567
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-611
Cow position:
Alignm length: 645
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 306

Conread position: 3-622
Cow position:
Alignm length: 646
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 84

Conread position: 3-633
Cow position:
Alignm length: 663
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 324

Conread position: 3-656
Cow position:
Alignm length: 675
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 3-660
Cow position:
Alignm length: 694
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 14

Conread position: 3-663
Cow position:
Alignm length: 681
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 100

Conread position: 3-668
Cow position:
Alignm length: 699
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 321

Conread position: 3-678
Cow position:
Alignm length: 707
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 322

Conread position: 3-687
Cow position:
Alignm length: 716
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 306

Conread position: 3-689
Cow position:
Alignm length: 720
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 13

Conread position: 3-689
Cow position:
Alignm length: 711
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 51

Conread position: 3-689
Cow position:
Alignm length: 714
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 14

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 202

Conread position: 3-693
Cow position:
Alignm length: 722
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-693
Cow position:
Alignm length: 718
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 53

Conread position: 3-696
Cow position:
Alignm length: 721
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-732
Cow position:
Alignm length: 760
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 42

Conread position: 4-689
Cow position:
Alignm length: 725
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 322

Conread position: 5-403
Cow position:
Alignm length: 410
Alignm identity: 276
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 97, 9

Conread position: 5-478
Cow position:
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 27

Conread position: 8-477
Cow position:
Alignm length: 488
Alignm identity: 320
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 94

Conread position: 9-606
Cow position:
Alignm length: 623
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 9-689
Cow position:
Alignm length: 711
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 315

Conread position: 9-721
Cow position:
Alignm length: 741
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 144

Conread position: 10-675
Cow position:
Alignm length: 690
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 152

Conread position: 12-689
Cow position:
Alignm length: 712
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 185

Conread position: 12-690
Cow position:
Alignm length: 704
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 107

Conread position: 14-441
Cow position:
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 16-548
Cow position:
Alignm length: 555
Alignm identity: 368
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 48

Conread position: 17-681
Cow position:
Alignm length: 695
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 64

Conread position: 17-689
Cow position:
Alignm length: 695
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 18-678
Cow position:
Alignm length: 686
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 19-716
Cow position:
Alignm length: 719
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 110

Conread position: 20-451
Cow position:
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 34-566
Cow position:
Alignm length: 548
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 54

Conread position: 41-658
Cow position:
Alignm length: 629
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 100

Conread position: 42-689
Cow position:
Alignm length: 686
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 102

Conread position: 45-688
Cow position:
Alignm length: 667
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 125

Conread position: 48-689
Cow position:
Alignm length: 669
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 54-689
Cow position:
Alignm length: 663
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 54-689
Cow position:
Alignm length: 662
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 9

Conread position: 61-714
Cow position:
Alignm length: 674
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 68-725
Cow position:
Alignm length: 675
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 56

Conread position: 70-472
Cow position:
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 113

Conread position: 72-689
Cow position:
Alignm length: 642
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 246

Conread position: 79-689
Cow position:
Alignm length: 631
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 243

Conread position: 81-614
Cow position:
Alignm length: 561
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 259

Conread position: 92-452
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 76, 21

Conread position: 93-423
Cow position:
Alignm length: 347
Alignm identity: 225
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 164, 21

Conread position: 94-714
Cow position:
Alignm length: 656
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 87

Conread position: 97-360
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 80

Conread position: 117-678
Cow position:
Alignm length: 587
Alignm identity: 379
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 33, 14

Conread position: 119-689
Cow position:
Alignm length: 591
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 199

Conread position: 119-689
Cow position:
Alignm length: 596
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 199

Conread position: 120-689
Cow position:
Alignm length: 592
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 120-689
Cow position:
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 124-603
Cow position:
Alignm length: 508
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 56

Conread position: 135-689
Cow position:
Alignm length: 573
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 183

Conread position: 139-689
Cow position:
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 175

Conread position: 147-460
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 242, 18

Conread position: 147-675
Cow position:
Alignm length: 544
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 30

Conread position: 148-677
Cow position:
Alignm length: 544
Alignm identity: 337
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 261, 43

Conread position: 148-678
Cow position:
Alignm length: 552
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 16

Conread position: 150-659
Cow position:
Alignm length: 523
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 150-707
Cow position:
Alignm length: 575
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 66

Conread position: 157-676
Cow position:
Alignm length: 542
Alignm identity: 353
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 8, 118

Conread position: 166-478
Cow position:
Alignm length: 322
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 226, 151

Conread position: 167-477
Cow position:
Alignm length: 319
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 228, 82

Conread position: 168-649
Cow position:
Alignm length: 503
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 135

Conread position: 170-565
Cow position:
Alignm length: 415
Alignm identity: 278
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 15, 69

Conread position: 178-477
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 216, 136

Conread position: 178-646
Cow position:
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 85

Conread position: 178-689
Cow position:
Alignm length: 535
Alignm identity: 349
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 220, 51

Conread position: 180-693
Cow position:
Alignm length: 537
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 123

Conread position: 181-470
Cow position:
Alignm length: 292
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 30

Conread position: 183-687
Cow position:
Alignm length: 527
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 134

Conread position: 187-709
Cow position:
Alignm length: 541
Alignm identity: 344
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 196, 46

Conread position: 189-689
Cow position:
Alignm length: 523
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 128

Conread position: 192-675
Cow position:
Alignm length: 505
Alignm identity: 329
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 206, 12

Conread position: 207-689
Cow position:
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 66

Conread position: 216-693
Cow position:
Alignm length: 489
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 132

Conread position: 224-434
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 167, 106

Conread position: 237-678
Cow position:
Alignm length: 470
Alignm identity: 311
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 161, 77

Conread position: 242-689
Cow position:
Alignm length: 468
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 75

Conread position: 246-651
Cow position:
Alignm length: 427
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 142, 71

Conread position: 250-678
Cow position:
Alignm length: 446
Alignm identity: 298
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 146, 65

Conread position: 252-678
Cow position:
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 65

Conread position: 255-594
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 9

Conread position: 259-476
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 130, 58

Conread position: 259-693
Cow position:
Alignm length: 462
Alignm identity: 311
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 16, 57

Conread position: 264-464
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 50

Conread position: 269-478
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 125, 62

Conread position: 269-510
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 44

Conread position: 269-689
Cow position:
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 48

Conread position: 270-678
Cow position:
Alignm length: 428
Alignm identity: 272
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 129, 17

Conread position: 270-689
Cow position:
Alignm length: 440
Alignm identity: 297
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 124, 47

Conread position: 271-693
Cow position:
Alignm length: 448
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 45

Conread position: 275-678
Cow position:
Alignm length: 420
Alignm identity: 284
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 113, 25

Conread position: 283-689
Cow position:
Alignm length: 429
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 20

Conread position: 287-678
Cow position:
Alignm length: 413
Alignm identity: 274
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 107, 30

Conread position: 307-678
Cow position:
Alignm length: 390
Alignm identity: 257
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 23

Conread position: 316-693
Cow position:
Alignm length: 392
Alignm identity: 256
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 21

Conread position: 327-666
Cow position:
Alignm length: 359
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 274

Conread position: 337-694
Cow position:
Alignm length: 381
Alignm identity: 251
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 229

Conread position: 351-639
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 43, 8

Conread position: 351-678
Cow position:
Alignm length: 350
Alignm identity: 240
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 240

Conread position: 368-689
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 213

Conread position: 376-689
Cow position:
Alignm length: 328
Alignm identity: 196
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 101, 149

Conread position: 383-689
Cow position:
Alignm length: 325
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 156

Conread position: 386-689
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 141

Conread position: 405-656
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 149

Conread position: 410-666
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 162

Conread position: 410-711
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 162

Conread position: 417-693
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 231

Conread position: 419-693
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 162

Conread position: 430-689
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 86

Show alignments to all cow chromosomes.