Cow genome map

Conread name: Utr1-UTR010050E01

Conread position: 1-397
Cow position:
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 164

Conread position: 1-594
Cow position:
Alignm length: 621
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 75

Conread position: 1-627
Cow position:
Alignm length: 653
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 241

Conread position: 1-669
Cow position:
Alignm length: 696
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 136

Conread position: 1-669
Cow position:
Alignm length: 690
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 198

Conread position: 1-677
Cow position:
Alignm length: 715
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 78

Conread position: 1-678
Cow position:
Alignm length: 697
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 96

Conread position: 1-689
Cow position:
Alignm length: 719
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-689
Cow position:
Alignm length: 719
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 70

Conread position: 1-689
Cow position:
Alignm length: 716
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 177

Conread position: 1-689
Cow position:
Alignm length: 714
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 321

Conread position: 1-689
Cow position:
Alignm length: 718
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-689
Cow position:
Alignm length: 717
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 234

Conread position: 1-689
Cow position:
Alignm length: 720
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 327

Conread position: 2-494
Cow position:
Alignm length: 515
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 2-595
Cow position:
Alignm length: 625
Alignm identity: 397
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 199

Conread position: 2-607
Cow position:
Alignm length: 649
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 338

Conread position: 3-401
Cow position:
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 51

Conread position: 3-675
Cow position:
Alignm length: 706
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 341

Conread position: 3-678
Cow position:
Alignm length: 703
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 22

Conread position: 3-689
Cow position:
Alignm length: 717
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 322

Conread position: 3-689
Cow position:
Alignm length: 719
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 250

Conread position: 3-689
Cow position:
Alignm length: 717
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position:
Alignm length: 714
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-689
Cow position:
Alignm length: 711
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 322

Conread position: 3-689
Cow position:
Alignm length: 719
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-693
Cow position:
Alignm length: 721
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 3-694
Cow position:
Alignm length: 712
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 322

Conread position: 4-693
Cow position:
Alignm length: 718
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 108

Conread position: 9-689
Cow position:
Alignm length: 702
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 78

Conread position: 9-693
Cow position:
Alignm length: 703
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 45

Conread position: 9-723
Cow position:
Alignm length: 728
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 45

Conread position: 17-630
Cow position:
Alignm length: 637
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 90

Conread position: 17-715
Cow position:
Alignm length: 739
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 264

Conread position: 18-455
Cow position:
Alignm length: 449
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 52

Conread position: 18-607
Cow position:
Alignm length: 604
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 18-663
Cow position:
Alignm length: 685
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 237

Conread position: 18-673
Cow position:
Alignm length: 686
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 294

Conread position: 18-693
Cow position:
Alignm length: 705
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 223

Conread position: 18-706
Cow position:
Alignm length: 727
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 89

Conread position: 30-693
Cow position:
Alignm length: 693
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 31

Conread position: 45-452
Cow position:
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 151

Conread position: 47-382
Cow position:
Alignm length: 342
Alignm identity: 224
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 143

Conread position: 47-678
Cow position:
Alignm length: 654
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 20

Conread position: 52-451
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 5

Conread position: 53-673
Cow position:
Alignm length: 661
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 54-506
Cow position:
Alignm length: 466
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 13

Conread position: 55-395
Cow position:
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 44

Conread position: 61-689
Cow position:
Alignm length: 656
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 261

Conread position: 68-707
Cow position:
Alignm length: 667
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 97-693
Cow position:
Alignm length: 620
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 11

Conread position: 105-694
Cow position:
Alignm length: 620
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 221

Conread position: 119-665
Cow position:
Alignm length: 552
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 212

Conread position: 124-652
Cow position:
Alignm length: 550
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 123

Conread position: 125-684
Cow position:
Alignm length: 578
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 189

Conread position: 127-689
Cow position:
Alignm length: 585
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 150

Conread position: 127-690
Cow position:
Alignm length: 582
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 25

Conread position: 128-675
Cow position:
Alignm length: 578
Alignm identity: 368
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 37, 26

Conread position: 130-689
Cow position:
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 7

Conread position: 135-388
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 118

Conread position: 135-693
Cow position:
Alignm length: 582
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 180

Conread position: 144-477
Cow position:
Alignm length: 347
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 252, 157

Conread position: 146-693
Cow position:
Alignm length: 572
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 158

Conread position: 147-438
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 259, 17

Conread position: 148-605
Cow position:
Alignm length: 486
Alignm identity: 323
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 35

Conread position: 148-689
Cow position:
Alignm length: 566
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 171

Conread position: 151-677
Cow position:
Alignm length: 540
Alignm identity: 342
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 228, 20

Conread position: 155-678
Cow position:
Alignm length: 548
Alignm identity: 324
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 125, 11

Conread position: 166-678
Cow position:
Alignm length: 531
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 151

Conread position: 170-678
Cow position:
Alignm length: 533
Alignm identity: 346
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 30, 11

Conread position: 171-693
Cow position:
Alignm length: 545
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 63

Conread position: 173-402
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 144, 0

Conread position: 177-689
Cow position:
Alignm length: 536
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 14

Conread position: 178-627
Cow position:
Alignm length: 471
Alignm identity: 316
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 190, 139

Conread position: 178-678
Cow position:
Alignm length: 521
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 10

Conread position: 182-478
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 98, 123

Conread position: 187-607
Cow position:
Alignm length: 445
Alignm identity: 292
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 71

Conread position: 209-687
Cow position:
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 90

Conread position: 212-695
Cow position:
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 101

Conread position: 213-693
Cow position:
Alignm length: 504
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 104

Conread position: 224-689
Cow position:
Alignm length: 488
Alignm identity: 317
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 25

Conread position: 225-627
Cow position:
Alignm length: 424
Alignm identity: 278
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 20

Conread position: 229-477
Cow position:
Alignm length: 257
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 165, 11

Conread position: 234-468
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 21

Conread position: 234-689
Cow position:
Alignm length: 472
Alignm identity: 299
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 85, 294

Conread position: 244-666
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 51

Conread position: 253-471
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 139, 63

Conread position: 258-689
Cow position:
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 61

Conread position: 264-693
Cow position:
Alignm length: 452
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 69

Conread position: 265-443
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 35

Conread position: 265-607
Cow position:
Alignm length: 359
Alignm identity: 233
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 59

Conread position: 265-678
Cow position:
Alignm length: 436
Alignm identity: 289
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 133, 38

Conread position: 271-689
Cow position:
Alignm length: 441
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 275-600
Cow position:
Alignm length: 341
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 27

Conread position: 286-689
Cow position:
Alignm length: 428
Alignm identity: 280
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 35

Conread position: 291-678
Cow position:
Alignm length: 410
Alignm identity: 261
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 26

Conread position: 300-707
Cow position:
Alignm length: 422
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 12, 70

Conread position: 309-706
Cow position:
Alignm length: 424
Alignm identity: 281
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 23

Conread position: 316-678
Cow position:
Alignm length: 387
Alignm identity: 257
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 20

Conread position: 325-696
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 33

Conread position: 327-714
Cow position:
Alignm length: 413
Alignm identity: 271
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 67, 245

Conread position: 333-689
Cow position:
Alignm length: 379
Alignm identity: 259
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 71, 200

Conread position: 334-675
Cow position:
Alignm length: 360
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 21

Conread position: 337-568
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 148

Conread position: 337-689
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 51

Conread position: 338-477
Cow position:
Alignm length: 140
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 340-806
Cow position:
Alignm length: 489
Alignm identity: 255
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 54, 193

Conread position: 343-693
Cow position:
Alignm length: 365
Alignm identity: 250
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 51, 130

Conread position: 356-623
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 8, 233

Conread position: 357-677
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 231

Conread position: 368-709
Cow position:
Alignm length: 362
Alignm identity: 238
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 202

Conread position: 371-678
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 201

Conread position: 375-660
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 12

Conread position: 386-689
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 212

Conread position: 395-689
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 132

Conread position: 405-689
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 174

Conread position: 409-681
Cow position:
Alignm length: 287
Alignm identity: 197
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 116

Conread position: 465-689
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 59

Show alignments to all cow chromosomes.