Cow genome map

Conread name: Utr1-UTR010050E01

Conread position: 1-395
Cow position: chr16:20635724-20635326 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 48, 128

Conread position: 1-443
Cow position: chr16:5654967-5655404 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 304
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 108

Conread position: 1-477
Cow position: chr16:1565883-1565397 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 1-477
Cow position: chr16:20969009-20968520 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 202

Conread position: 1-477
Cow position: chr16:42734834-42734352 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 52

Conread position: 1-481
Cow position: chr16:16230102-16230595 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 322

Conread position: 1-519
Cow position: chr16:6647100-6647634 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 253

Conread position: 1-648
Cow position: chr16:5633519-5632874 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 1-675
Cow position: chr16:3331700-3332395 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 71

Conread position: 1-678
Cow position: chr16:194116-193444 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 52

Conread position: 1-678
Cow position: chr16:416690-417386 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 59

Conread position: 1-678
Cow position: chr16:4462536-4461820 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 326

Conread position: 1-678
Cow position: chr16:7466403-7467104 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 325

Conread position: 1-678
Cow position: chr16:12161489-12160789 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 172

Conread position: 1-678
Cow position: chr16:26653467-26654154 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 112

Conread position: 1-678
Cow position: chr16:31586907-31586209 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 120

Conread position: 1-678
Cow position: chr16:48103881-48104576 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 1-681
Cow position: chr16:41033093-41033793 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 321

Conread position: 1-688
Cow position: chr16:25455672-25454961 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 186

Conread position: 1-689
Cow position: chr16:10440033-10440739 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 172

Conread position: 1-689
Cow position: chr16:10966420-10965746 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 60

Conread position: 1-689
Cow position: chr16:15494250-15494958 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 28

Conread position: 1-689
Cow position: chr16:23985100-23985813 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 325

Conread position: 1-689
Cow position: chr16:25259911-25260624 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 328

Conread position: 1-689
Cow position: chr16:25443666-25444377 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 93

Conread position: 1-689
Cow position: chr16:26665506-26666204 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 239

Conread position: 1-689
Cow position: chr16:27731592-27730881 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-689
Cow position: chr16:41164969-41164271 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 172

Conread position: 1-689
Cow position: chr16:43895473-43894762 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 325

Conread position: 1-689
Cow position: chr16:52526021-52526733 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 325

Conread position: 1-693
Cow position: chr16:25343766-25344483 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 164

Conread position: 1-693
Cow position: chr16:37443728-37443031 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 67

Conread position: 1-693
Cow position: chr16:37479071-37478356 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-696
Cow position: chr16:29035687-29036384 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 1-699
Cow position: chr16:39615041-39615735 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 1-702
Cow position: chr16:25262418-25263128 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 1-728
Cow position: chr16:34505487-34506237 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 342

Conread position: 2-487
Cow position: chr16:6298704-6298224 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 111

Conread position: 2-724
Cow position: chr16:19066310-19066994 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 104

Conread position: 3-471
Cow position: chr16:7083431-7083922 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 333

Conread position: 3-477
Cow position: chr16:36240948-36241414 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 45

Conread position: 3-478
Cow position: chr16:18495953-18495471 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 3-541
Cow position: chr16:51419017-51418472 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 88

Conread position: 3-660
Cow position: chr16:24621906-24621224 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 309

Conread position: 3-677
Cow position: chr16:28168526-28167828 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position: chr16:5526309-5525604 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 14

Conread position: 3-689
Cow position: chr16:11744332-11745041 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 309

Conread position: 3-689
Cow position: chr16:23876732-23876040 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 51

Conread position: 3-689
Cow position: chr16:46554232-46554922 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 48

Conread position: 3-689
Cow position: chr16:47403175-47403882 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-693
Cow position: chr16:28194508-28193795 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 250

Conread position: 3-715
Cow position: chr16:17111064-17111779 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 105

Conread position: 4-478
Cow position: chr16:41564177-41564619 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 91

Conread position: 4-669
Cow position: chr16:29157450-29158104 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 9-402
Cow position: chr16:22381052-22381444 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 91

Conread position: 14-443
Cow position: chr16:49386818-49387263 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 17-396
Cow position: chr16:36164569-36164952 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 178

Conread position: 17-559
Cow position: chr16:26424127-26423578 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 152

Conread position: 17-559
Cow position: chr16:52627180-52627728 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 102

Conread position: 17-600
Cow position: chr16:47475826-47476410 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 13

Conread position: 17-681
Cow position: chr16:41684487-41683810 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 139

Conread position: 17-693
Cow position: chr16:6945062-6945765 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 203

Conread position: 17-706
Cow position: chr16:16220203-16220899 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 132

Conread position: 18-678
Cow position: chr16:47772074-47772751 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 86

Conread position: 19-603
Cow position: chr16:5663601-5664203 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 155

Conread position: 29-401
Cow position: chr16:1958816-1958445 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 83

Conread position: 38-494
Cow position: chr16:18358940-18359393 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 317
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 100, 29

Conread position: 40-666
Cow position: chr16:22852835-22853464 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 153

Conread position: 45-434
Cow position: chr16:39364793-39364407 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 120, 82

Conread position: 45-485
Cow position: chr16:32778804-32778362 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 302
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 80, 34

Conread position: 45-595
Cow position: chr16:19784501-19785036 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 353
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 147, 22

Conread position: 45-628
Cow position: chr16:7647837-7648412 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 49

Conread position: 45-729
Cow position: chr16:27980262-27979580 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 70

Conread position: 54-430
Cow position: chr16:15420580-15420948 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 114, 40

Conread position: 54-666
Cow position: chr16:49254386-49253761 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 54-678
Cow position: chr16:14620433-14619790 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 54-707
Cow position: chr16:34207736-34208382 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 48

Conread position: 59-703
Cow position: chr16:15548756-15549367 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 48

Conread position: 60-478
Cow position: chr16:16960998-16960585 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 25

Conread position: 60-714
Cow position: chr16:16031747-16032423 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 262

Conread position: 61-702
Cow position: chr16:43646687-43647300 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 17

Conread position: 62-677
Cow position: chr16:1651221-1651848 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 21

Conread position: 67-607
Cow position: chr16:25742617-25743161 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 31

Conread position: 67-689
Cow position: chr16:13602770-13602137 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 73

Conread position: 68-477
Cow position: chr16:5591165-5591577 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 65, 117

Conread position: 68-500
Cow position: chr16:6267084-6266654 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 179

Conread position: 69-476
Cow position: chr16:38533288-38532868 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 41

Conread position: 69-656
Cow position: chr16:10799014-10799622 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 65

Conread position: 70-678
Cow position: chr16:17141271-17141896 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 71-689
Cow position: chr16:13539561-13538924 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 237

Conread position: 71-689
Cow position: chr16:24210528-24209898 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 217

Conread position: 72-699
Cow position: chr16:9610828-9610216 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 76-641
Cow position: chr16:54431442-54432029 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 232

Conread position: 95-494
Cow position: chr16:52891214-52891624 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 269
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 39

Conread position: 101-689
Cow position: chr16:19886925-19887521 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 96

Conread position: 104-396
Cow position: chr16:23789992-23790281 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 46

Conread position: 104-672
Cow position: chr16:33921838-33921261 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 108-693
Cow position: chr16:16711232-16710666 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 369
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 75

Conread position: 118-659
Cow position: chr16:42117679-42118224 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 48

Conread position: 119-678
Cow position: chr16:53611717-53612294 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 205

Conread position: 121-689
Cow position: chr16:4755944-4756525 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 124-644
Cow position: chr16:36652331-36652845 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 328
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 54

Conread position: 124-693
Cow position: chr16:18695046-18694467 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 125

Conread position: 125-693
Cow position: chr16:45817186-45816611 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 126-689
Cow position: chr16:23064948-23065503 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 62

Conread position: 147-669
Cow position: chr16:36238404-36238938 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 165-622
Cow position: chr16:54175368-54175832 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 233, 19

Conread position: 166-450
Cow position: chr16:26499455-26499757 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 139, 83

Conread position: 168-689
Cow position: chr16:16150783-16150248 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 149

Conread position: 168-693
Cow position: chr16:2233738-2233221 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 10

Conread position: 177-689
Cow position: chr16:34475-35000 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 179-477
Cow position: chr16:49463602-49463299 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 71

Conread position: 181-678
Cow position: chr16:11053977-11054482 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 339
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 206, 55

Conread position: 190-689
Cow position: chr16:12650917-12651428 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 113

Conread position: 202-675
Cow position: chr16:53990963-53991442 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 327
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 196, 115

Conread position: 208-477
Cow position: chr16:23097159-23096885 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 186, 109

Conread position: 208-477
Cow position: chr16:23098346-23098620 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 186, 109

Conread position: 225-478
Cow position: chr16:42175879-42176145 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 12

Conread position: 225-689
Cow position: chr16:37145999-37146477 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 92

Conread position: 229-678
Cow position: chr16:657988-658451 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 88

Conread position: 236-585
Cow position: chr16:2229406-2229766 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 158, 65

Conread position: 236-623
Cow position: chr16:32604186-32604578 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 259
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 65, 80

Conread position: 251-602
Cow position: chr16:37807444-37807781 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 151

Conread position: 251-678
Cow position: chr16:36792596-36793011 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 52

Conread position: 253-689
Cow position: chr16:21189308-21189758 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 64

Conread position: 255-639
Cow position: chr16:42131928-42132325 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 57

Conread position: 265-669
Cow position: chr16:15178751-15179164 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 129, 67

Conread position: 273-467
Cow position: chr16:48695864-48696058 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 121, 39

Conread position: 274-678
Cow position: chr16:42863494-42863092 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 39

Conread position: 284-600
Cow position: chr16:14068385-14068076 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 15

Conread position: 287-693
Cow position: chr16:42080524-42080109 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 276
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 102, 30

Conread position: 304-627
Cow position: chr16:37532884-37533220 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 273

Conread position: 307-660
Cow position: chr16:9416452-9416101 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 25

Conread position: 316-669
Cow position: chr16:43744460-43744107 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 17

Conread position: 324-669
Cow position: chr16:32838475-32838840 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 39

Conread position: 325-689
Cow position: chr16:12175955-12175565 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 65, 118

Conread position: 326-677
Cow position: chr16:24738586-24738947 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 12

Conread position: 333-693
Cow position: chr16:24988590-24988212 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 61, 200

Conread position: 333-696
Cow position: chr16:4973395-4973018 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 216

Conread position: 333-707
Cow position: chr16:54286681-54287068 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 251
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 231

Conread position: 334-678
Cow position: chr16:45550277-45550636 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 13

Conread position: 338-709
Cow position: chr16:30052082-30052472 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 24

Conread position: 340-687
Cow position: chr16:28206974-28206613 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 246

Conread position: 341-689
Cow position: chr16:43563257-43562895 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 245

Conread position: 347-641
Cow position: chr16:28066198-28066512 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 186

Conread position: 347-689
Cow position: chr16:54180212-54179864 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 184

Conread position: 365-707
Cow position: chr16:10569017-10569363 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 216

Conread position: 374-632
Cow position: chr16:7354974-7354716 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 110

Conread position: 386-693
Cow position: chr16:26316897-26317216 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 141

Conread position: 394-677
Cow position: chr16:46529128-46528835 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 133

Conread position: 397-678
Cow position: chr16:27593625-27593331 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 130

Conread position: 405-689
Cow position: chr16:44189680-44189388 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 150

Show alignments to all cow chromosomes.