Cow genome map

Conread name: Utr1-UTR010050E01

Conread position: 1-392
Cow position:
Alignm length: 398
Alignm identity: 270
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 134

Conread position: 1-451
Cow position:
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 181

Conread position: 1-477
Cow position:
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 70

Conread position: 1-607
Cow position:
Alignm length: 638
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 1-655
Cow position:
Alignm length: 682
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 135

Conread position: 1-659
Cow position:
Alignm length: 665
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 1-663
Cow position:
Alignm length: 685
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 16

Conread position: 1-674
Cow position:
Alignm length: 697
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 53

Conread position: 1-675
Cow position:
Alignm length: 704
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 52

Conread position: 1-678
Cow position:
Alignm length: 704
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 318

Conread position: 1-678
Cow position:
Alignm length: 707
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 265

Conread position: 1-678
Cow position:
Alignm length: 709
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 326

Conread position: 1-678
Cow position:
Alignm length: 707
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-678
Cow position:
Alignm length: 713
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 113

Conread position: 1-678
Cow position:
Alignm length: 701
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 324

Conread position: 1-681
Cow position:
Alignm length: 701
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 160

Conread position: 1-689
Cow position:
Alignm length: 712
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 252

Conread position: 1-689
Cow position:
Alignm length: 716
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 111

Conread position: 1-689
Cow position:
Alignm length: 713
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-689
Cow position:
Alignm length: 714
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 321

Conread position: 1-693
Cow position:
Alignm length: 724
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 181

Conread position: 1-695
Cow position:
Alignm length: 718
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 117

Conread position: 1-696
Cow position:
Alignm length: 725
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 37

Conread position: 1-709
Cow position:
Alignm length: 751
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 1-712
Cow position:
Alignm length: 731
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 1-726
Cow position:
Alignm length: 746
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 173

Conread position: 2-675
Cow position:
Alignm length: 704
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 23

Conread position: 2-689
Cow position:
Alignm length: 713
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 73

Conread position: 3-385
Cow position:
Alignm length: 406
Alignm identity: 279
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 50, 11

Conread position: 3-477
Cow position:
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-477
Cow position:
Alignm length: 488
Alignm identity: 301
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 26

Conread position: 3-478
Cow position:
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 124

Conread position: 3-586
Cow position:
Alignm length: 614
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-601
Cow position:
Alignm length: 629
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 118

Conread position: 3-646
Cow position:
Alignm length: 676
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 3-651
Cow position:
Alignm length: 680
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-675
Cow position:
Alignm length: 695
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 8

Conread position: 3-677
Cow position:
Alignm length: 706
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position:
Alignm length: 717
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 323

Conread position: 3-689
Cow position:
Alignm length: 713
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 50

Conread position: 3-689
Cow position:
Alignm length: 710
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 36

Conread position: 3-689
Cow position:
Alignm length: 714
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-689
Cow position:
Alignm length: 716
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 13

Conread position: 3-689
Cow position:
Alignm length: 705
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 34

Conread position: 3-689
Cow position:
Alignm length: 712
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 306

Conread position: 3-689
Cow position:
Alignm length: 716
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-693
Cow position:
Alignm length: 716
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 3-693
Cow position:
Alignm length: 714
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 3-693
Cow position:
Alignm length: 722
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 13

Conread position: 3-693
Cow position:
Alignm length: 723
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-707
Cow position:
Alignm length: 746
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 4-689
Cow position:
Alignm length: 718
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 9-659
Cow position:
Alignm length: 676
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 18-606
Cow position:
Alignm length: 622
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 260

Conread position: 18-678
Cow position:
Alignm length: 692
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 221

Conread position: 25-477
Cow position:
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 301

Conread position: 25-689
Cow position:
Alignm length: 696
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 287

Conread position: 29-641
Cow position:
Alignm length: 644
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 297

Conread position: 30-392
Cow position:
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 5

Conread position: 34-644
Cow position:
Alignm length: 624
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 205

Conread position: 45-662
Cow position:
Alignm length: 629
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 22

Conread position: 48-475
Cow position:
Alignm length: 439
Alignm identity: 297
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 117, 32

Conread position: 52-390
Cow position:
Alignm length: 340
Alignm identity: 241
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 90, 78

Conread position: 54-471
Cow position:
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 54-678
Cow position:
Alignm length: 650
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 6

Conread position: 54-689
Cow position:
Alignm length: 660
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 6

Conread position: 54-703
Cow position:
Alignm length: 684
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 59-505
Cow position:
Alignm length: 466
Alignm identity: 308
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 113

Conread position: 60-457
Cow position:
Alignm length: 408
Alignm identity: 268
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 12, 123

Conread position: 60-478
Cow position:
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 102

Conread position: 60-670
Cow position:
Alignm length: 633
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 7

Conread position: 70-478
Cow position:
Alignm length: 420
Alignm identity: 281
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 78, 169

Conread position: 72-689
Cow position:
Alignm length: 652
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 41

Conread position: 76-678
Cow position:
Alignm length: 629
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 246

Conread position: 77-621
Cow position:
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 245

Conread position: 77-729
Cow position:
Alignm length: 686
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 79-472
Cow position:
Alignm length: 414
Alignm identity: 277
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 142, 52

Conread position: 81-689
Cow position:
Alignm length: 629
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 224

Conread position: 83-678
Cow position:
Alignm length: 612
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 175

Conread position: 94-478
Cow position:
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 228

Conread position: 96-689
Cow position:
Alignm length: 600
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 204

Conread position: 100-626
Cow position:
Alignm length: 551
Alignm identity: 359
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 98

Conread position: 100-693
Cow position:
Alignm length: 631
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 67

Conread position: 103-665
Cow position:
Alignm length: 572
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 14

Conread position: 118-707
Cow position:
Alignm length: 622
Alignm identity: 407
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 17

Conread position: 119-477
Cow position:
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 200

Conread position: 119-678
Cow position:
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 120-689
Cow position:
Alignm length: 593
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 124-693
Cow position:
Alignm length: 586
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 135-693
Cow position:
Alignm length: 580
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 29

Conread position: 137-664
Cow position:
Alignm length: 548
Alignm identity: 339
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 25, 50

Conread position: 139-555
Cow position:
Alignm length: 423
Alignm identity: 258
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 162

Conread position: 139-677
Cow position:
Alignm length: 570
Alignm identity: 373
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 48

Conread position: 139-678
Cow position:
Alignm length: 565
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 182

Conread position: 140-678
Cow position:
Alignm length: 559
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 106

Conread position: 142-689
Cow position:
Alignm length: 573
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 69

Conread position: 144-690
Cow position:
Alignm length: 573
Alignm identity: 365
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 174

Conread position: 148-440
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 170

Conread position: 148-677
Cow position:
Alignm length: 548
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 149-688
Cow position:
Alignm length: 563
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 169

Conread position: 153-707
Cow position:
Alignm length: 571
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 157-689
Cow position:
Alignm length: 560
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 20

Conread position: 166-478
Cow position:
Alignm length: 321
Alignm identity: 211
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 220, 50

Conread position: 166-693
Cow position:
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 151

Conread position: 178-689
Cow position:
Alignm length: 527
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 139

Conread position: 178-693
Cow position:
Alignm length: 531
Alignm identity: 327
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 69

Conread position: 189-689
Cow position:
Alignm length: 523
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 128

Conread position: 204-689
Cow position:
Alignm length: 503
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 114

Conread position: 208-678
Cow position:
Alignm length: 493
Alignm identity: 329
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 188, 87

Conread position: 218-689
Cow position:
Alignm length: 484
Alignm identity: 300
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 193, 114

Conread position: 218-693
Cow position:
Alignm length: 505
Alignm identity: 336
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 17, 63

Conread position: 219-689
Cow position:
Alignm length: 493
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 84

Conread position: 222-477
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 167, 95

Conread position: 224-501
Cow position:
Alignm length: 289
Alignm identity: 191
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 179, 93

Conread position: 229-693
Cow position:
Alignm length: 491
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 43

Conread position: 240-670
Cow position:
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 29

Conread position: 251-708
Cow position:
Alignm length: 471
Alignm identity: 309
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 149, 49

Conread position: 253-678
Cow position:
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 60

Conread position: 255-689
Cow position:
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 48

Conread position: 257-693
Cow position:
Alignm length: 460
Alignm identity: 309
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 139, 58

Conread position: 258-659
Cow position:
Alignm length: 414
Alignm identity: 259
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 6, 139

Conread position: 264-675
Cow position:
Alignm length: 427
Alignm identity: 281
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 125, 53

Conread position: 281-693
Cow position:
Alignm length: 433
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 282-693
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 7

Conread position: 283-689
Cow position:
Alignm length: 427
Alignm identity: 273
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 30

Conread position: 304-673
Cow position:
Alignm length: 386
Alignm identity: 252
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 19

Conread position: 309-696
Cow position:
Alignm length: 397
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 122

Conread position: 316-691
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 317-693
Cow position:
Alignm length: 391
Alignm identity: 257
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 16

Conread position: 323-689
Cow position:
Alignm length: 389
Alignm identity: 267
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 210

Conread position: 326-714
Cow position:
Alignm length: 399
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 58

Conread position: 333-696
Cow position:
Alignm length: 386
Alignm identity: 261
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 200

Conread position: 340-689
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 364

Conread position: 348-688
Cow position:
Alignm length: 361
Alignm identity: 245
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 48, 241

Conread position: 361-676
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 28, 109

Conread position: 363-669
Cow position:
Alignm length: 325
Alignm identity: 225
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 8

Conread position: 365-688
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 97

Conread position: 390-689
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 137

Conread position: 395-693
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 188

Conread position: 465-678
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 182

Show alignments to all cow chromosomes.