Cow genome map


           Conread name:
           Utr1-UTR010050E01
        

               Conread position:
               1-478
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 168
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               1-560
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 218
               

               Conread position:
               1-621
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               1-688
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 190
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 120
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 325
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 135
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               3-449
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               3-457
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               3-559
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 323
               

               Conread position:
               3-633
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 309
               

               Conread position:
               3-651
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 309
               

               Conread position:
               3-660
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 309
               

               Conread position:
               3-681
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 102
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 214
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 309
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 326
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 58
               

               Conread position:
               3-696
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 321
               

               Conread position:
               3-696
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 321
               

               Conread position:
               3-704
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 133
               

               Conread position:
               4-605
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               8-494
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               320
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               42, 142
               

               Conread position:
               9-688
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 203
               

               Conread position:
               14-699
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               18-449
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               288
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               114, 27
               

               Conread position:
               26-408
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 322
               

               Conread position:
               41-605
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 174
               

               Conread position:
               47-460
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 85
               

               Conread position:
               59-693
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 263
               

               Conread position:
               69-391
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 131
               

               Conread position:
               76-501
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               77-494
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               317, 28
               

               Conread position:
               79-396
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 107
               

               Conread position:
               83-559
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               332
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               119-689
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 199
               

               Conread position:
               124-424
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 79
               

               Conread position:
               127-678
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               137-661
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               139-476
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               142-579
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               148-689
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 170
               

               Conread position:
               148-689
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               148-696
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               150-689
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 168
               

               Conread position:
               165-690
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               189-554
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               205, 114
               

               Conread position:
               190-689
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 127
               

               Conread position:
               210-478
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 108
               

               Conread position:
               212-491
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               215-634
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 105
               

               Conread position:
               225-477
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               77, 207
               

               Conread position:
               225-693
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               229-693
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               234-675
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 83
               

               Conread position:
               240-678
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 77
               

               Conread position:
               251-689
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 66
               

               Conread position:
               252-689
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 51
               

               Conread position:
               253-689
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 64
               

               Conread position:
               254-689
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               144, 66
               

               Conread position:
               254-689
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 63
               

               Conread position:
               255-689
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               257-476
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               139, 29
               

               Conread position:
               258-689
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 59
               

               Conread position:
               259-703
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               101, 32
               

               Conread position:
               262-454
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               134, 41
               

               Conread position:
               268-693
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               276-650
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               118, 11
               

               Conread position:
               284-693
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               286-689
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               291-693
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               307-666
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               82, 116
               

               Conread position:
               327-693
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 133
               

               Conread position:
               333-678
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               61, 247
               

               Conread position:
               336-602
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               337-678
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               61, 254
               

               Conread position:
               363-728
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 31
               

               Conread position:
               367-703
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               368-678
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 227
               

               Conread position:
               413-678
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 112
               

               Conread position:
               421-689
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 85
               
Show alignments to all cow chromosomes.