Cow genome map
Conread name: | Utr1-UTR010050E01 |
Conread position: | 1-478 |
Cow position: | chr23:1800114-1800597 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 168 |
Conread position: | 1-489 |
Cow position: | chr23:15179542-15180042 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 103 |
Conread position: | 1-560 |
Cow position: | chr23:36028906-36028322 (view UCSC Genome Browser custom track) |
Alignm length: | 590 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 218 |
Conread position: | 1-621 |
Cow position: | chr23:15504488-15505108 (view UCSC Genome Browser custom track) |
Alignm length: | 647 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 80 |
Conread position: | 1-688 |
Cow position: | chr23:15350700-15351385 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 26 |
Conread position: | 1-689 |
Cow position: | chr23:4516014-4516723 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 190 |
Conread position: | 1-689 |
Cow position: | chr23:4891167-4891878 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 1-689 |
Cow position: | chr23:14960476-14959769 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 120 |
Conread position: | 1-689 |
Cow position: | chr23:15216361-15215652 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 325 |
Conread position: | 1-689 |
Cow position: | chr23:22144827-22144127 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 135 |
Conread position: | 1-689 |
Cow position: | chr23:37200043-37199331 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 119 |
Conread position: | 3-449 |
Cow position: | chr23:7219955-7219510 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 60 |
Conread position: | 3-457 |
Cow position: | chr23:17242622-17243071 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 306 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 46, 93 |
Conread position: | 3-559 |
Cow position: | chr23:943454-944036 (view UCSC Genome Browser custom track) |
Alignm length: | 587 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 323 |
Conread position: | 3-633 |
Cow position: | chr23:19316961-19317616 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 309 |
Conread position: | 3-651 |
Cow position: | chr23:4080618-4081291 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 309 |
Conread position: | 3-660 |
Cow position: | chr23:1249054-1248372 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 309 |
Conread position: | 3-681 |
Cow position: | chr23:2317075-2317740 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 102 |
Conread position: | 3-689 |
Cow position: | chr23:609208-609911 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 45 |
Conread position: | 3-689 |
Cow position: | chr23:3285237-3285941 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 14 |
Conread position: | 3-689 |
Cow position: | chr23:3417852-3417146 (view UCSC Genome Browser custom track) |
Alignm length: | 718 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 22 |
Conread position: | 3-689 |
Cow position: | chr23:14264824-14265529 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 214 |
Conread position: | 3-689 |
Cow position: | chr23:21009131-21008422 (view UCSC Genome Browser custom track) |
Alignm length: | 718 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 309 |
Conread position: | 3-689 |
Cow position: | chr23:21773436-21772728 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 326 |
Conread position: | 3-689 |
Cow position: | chr23:24119034-24119737 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 58 |
Conread position: | 3-696 |
Cow position: | chr23:2321466-2320755 (view UCSC Genome Browser custom track) |
Alignm length: | 720 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 321 |
Conread position: | 3-696 |
Cow position: | chr23:14971471-14970762 (view UCSC Genome Browser custom track) |
Alignm length: | 721 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 321 |
Conread position: | 3-704 |
Cow position: | chr23:16496792-16496065 (view UCSC Genome Browser custom track) |
Alignm length: | 738 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 133 |
Conread position: | 4-605 |
Cow position: | chr23:644239-643637 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 13 |
Conread position: | 8-494 |
Cow position: | chr23:4559078-4559562 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 320 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 42, 142 |
Conread position: | 9-688 |
Cow position: | chr23:3708884-3709586 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 203 |
Conread position: | 14-699 |
Cow position: | chr23:10422370-10421686 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 53 |
Conread position: | 18-449 |
Cow position: | chr23:16702244-16702682 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 288 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 114, 27 |
Conread position: | 26-408 |
Cow position: | chr23:1011333-1010940 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 322 |
Conread position: | 41-605 |
Cow position: | chr23:25562963-25563540 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 174 |
Conread position: | 47-460 |
Cow position: | chr23:10979983-10980400 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 264 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 35, 85 |
Conread position: | 59-693 |
Cow position: | chr23:4266082-4265429 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 263 |
Conread position: | 69-391 |
Cow position: | chr23:37228954-37228632 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 131 |
Conread position: | 76-501 |
Cow position: | chr23:35314843-35314403 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 23 |
Conread position: | 77-494 |
Cow position: | chr23:8099824-8100224 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 292 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 317, 28 |
Conread position: | 79-396 |
Cow position: | chr23:27755430-27755745 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 208 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 43, 107 |
Conread position: | 83-559 |
Cow position: | chr23:31612535-31613036 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 332 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 32, 53 |
Conread position: | 119-689 |
Cow position: | chr23:2720053-2720639 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 199 |
Conread position: | 124-424 |
Cow position: | chr23:1114693-1114993 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 218 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 41, 79 |
Conread position: | 127-678 |
Cow position: | chr23:1338864-1338315 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 39 |
Conread position: | 137-661 |
Cow position: | chr23:40888060-40888597 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 50 |
Conread position: | 139-476 |
Cow position: | chr23:31647452-31647118 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 229 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 26, 15 |
Conread position: | 142-579 |
Cow position: | chr23:22883718-22883281 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 283 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 26, 55 |
Conread position: | 148-689 |
Cow position: | chr23:28084467-28083911 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 170 |
Conread position: | 148-689 |
Cow position: | chr23:41143067-41143623 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 170 |
Conread position: | 148-696 |
Cow position: | chr23:5396954-5396391 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 170 |
Conread position: | 150-689 |
Cow position: | chr23:11713039-11712485 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 168 |
Conread position: | 165-690 |
Cow position: | chr23:16367577-16368117 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 18 |
Conread position: | 189-554 |
Cow position: | chr23:3844369-3843987 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 261 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 205, 114 |
Conread position: | 190-689 |
Cow position: | chr23:4533034-4532515 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 127 |
Conread position: | 210-478 |
Cow position: | chr23:1552632-1552364 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 190 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 36, 108 |
Conread position: | 212-491 |
Cow position: | chr23:2039744-2040025 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 205 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 68, 19 |
Conread position: | 215-634 |
Cow position: | chr23:25593720-25594153 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 105 |
Conread position: | 225-477 |
Cow position: | chr23:35274586-35274843 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 191 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 77, 207 |
Conread position: | 225-693 |
Cow position: | chr23:36473073-36473547 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 327 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 20, 54 |
Conread position: | 229-693 |
Cow position: | chr23:24516554-24517022 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 89 |
Conread position: | 234-675 |
Cow position: | chr23:33575151-33574700 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 305 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 112, 83 |
Conread position: | 240-678 |
Cow position: | chr23:30634875-30634421 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 77 |
Conread position: | 251-689 |
Cow position: | chr23:32008646-32008194 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 66 |
Conread position: | 252-689 |
Cow position: | chr23:10680102-10679651 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 51 |
Conread position: | 253-689 |
Cow position: | chr23:31703627-31704077 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 64 |
Conread position: | 254-689 |
Cow position: | chr23:2437446-2437002 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 295 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 144, 66 |
Conread position: | 254-689 |
Cow position: | chr23:3301589-3302037 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 63 |
Conread position: | 255-689 |
Cow position: | chr23:11172940-11172493 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 81 |
Conread position: | 257-476 |
Cow position: | chr23:14266799-14267014 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 139, 29 |
Conread position: | 258-689 |
Cow position: | chr23:31605165-31605610 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 59 |
Conread position: | 259-703 |
Cow position: | chr23:16018270-16017799 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 320 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 101, 32 |
Conread position: | 262-454 |
Cow position: | chr23:6666457-6666653 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 144 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 134, 41 |
Conread position: | 268-693 |
Cow position: | chr23:11386289-11385859 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 297 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 119, 55 |
Conread position: | 276-650 |
Cow position: | chr23:670647-671036 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 268 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 118, 11 |
Conread position: | 284-693 |
Cow position: | chr23:14216459-14216037 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 293 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 103, 33 |
Conread position: | 286-689 |
Cow position: | chr23:28987115-28987525 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 288 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 68, 31 |
Conread position: | 291-693 |
Cow position: | chr23:30166570-30166161 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 42 |
Conread position: | 307-666 |
Cow position: | chr23:38301949-38301582 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 256 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 82, 116 |
Conread position: | 327-693 |
Cow position: | chr23:36676330-36675954 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 133 |
Conread position: | 333-678 |
Cow position: | chr23:14790293-14790657 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 253 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 61, 247 |
Conread position: | 336-602 |
Cow position: | chr23:16488503-16488762 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 177 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 145 |
Conread position: | 337-678 |
Cow position: | chr23:2367921-2368282 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 239 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 61, 254 |
Conread position: | 363-728 |
Cow position: | chr23:7288676-7288328 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 244 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 42, 31 |
Conread position: | 367-703 |
Cow position: | chr23:30959895-30960238 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 235 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 11, 20 |
Conread position: | 368-678 |
Cow position: | chr23:7250244-7249925 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 227 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 24, 227 |
Conread position: | 413-678 |
Cow position: | chr23:771594-771318 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 200 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 63, 112 |
Conread position: | 421-689 |
Cow position: | chr23:24823110-24822843 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 184 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 11, 85 |
Show alignments to all cow chromosomes.