Cow genome map


           Conread name:
           Utr1-UTR010050E01
        

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 118
               

               Conread position:
               1-509
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 318
               

               Conread position:
               1-638
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               1-663
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 53
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 137
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 202
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 325
               

               Conread position:
               3-396
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 104
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               3-627
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               3-688
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 311
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 323
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 319
               

               Conread position:
               3-716
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 184
               

               Conread position:
               7-460
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               31, 246
               

               Conread position:
               7-481
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               159, 40
               

               Conread position:
               8-477
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               9-686
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 202
               

               Conread position:
               9-689
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 287
               

               Conread position:
               17-402
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               17-422
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               17-616
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               18-391
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               18-678
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 320
               

               Conread position:
               34-364
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 107
               

               Conread position:
               45-494
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 55
               

               Conread position:
               46-689
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 61
               

               Conread position:
               53-678
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               54-490
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               306
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               69-689
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 253
               

               Conread position:
               73-613
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               359
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               73-613
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               354
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               75-678
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               82-504
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 155
               

               Conread position:
               94-566
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               106-689
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 216
               

               Conread position:
               120-689
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 184
               

               Conread position:
               123-663
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 181
               

               Conread position:
               142-674
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               142-689
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               366
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               151-627
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               158-449
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               236, 76
               

               Conread position:
               160-689
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               361
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               5, 85
               

               Conread position:
               165-721
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               370
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               99, 65
               

               Conread position:
               166-663
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 151
               

               Conread position:
               170-384
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               187-666
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 16
               

               Conread position:
               193-689
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               198-402
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 120
               

               Conread position:
               198-709
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 106
               

               Conread position:
               206-675
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 43
               

               Conread position:
               214-677
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               329
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               182, 30
               

               Conread position:
               224-632
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 20
               

               Conread position:
               225-696
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               321
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               50, 93
               

               Conread position:
               238-392
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               240-689
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               246-689
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 57
               

               Conread position:
               251-670
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 52
               

               Conread position:
               254-401
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               257-603
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               257-651
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               261
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               139, 44
               

               Conread position:
               260-478
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               127, 39
               

               Conread position:
               262-677
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               39, 134
               

               Conread position:
               304-663
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 28
               

               Conread position:
               307-678
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               307-693
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               313-678
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               81, 17
               

               Conread position:
               315-485
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 164
               

               Conread position:
               333-681
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               61, 100
               

               Conread position:
               333-689
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               61, 200
               

               Conread position:
               337-689
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               17, 172
               

               Conread position:
               348-681
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 156
               

               Conread position:
               355-693
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               358-675
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 228
               

               Conread position:
               362-678
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               34, 99
               

               Conread position:
               386-689
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 141
               

               Conread position:
               396-689
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 131
               

               Conread position:
               400-689
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 142
               

               Conread position:
               421-678
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 97
               
Show alignments to all cow chromosomes.