Cow genome map


           Conread name:
           Utr1-UTR010050E01
        

               Conread position:
               1-444
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 140
               

               Conread position:
               1-464
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 329
               

               Conread position:
               1-478
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 59
               

               Conread position:
               1-494
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               323
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               1-634
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               1-647
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 242
               

               Conread position:
               2-506
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 323
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 328
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 323
               

               Conread position:
               3-586
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 310
               

               Conread position:
               3-648
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 309
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 58
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 100
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 57
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 323
               

               Conread position:
               3-693
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 275
               

               Conread position:
               4-689
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               4-693
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 198
               

               Conread position:
               9-689
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 317
               

               Conread position:
               10-432
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               12-691
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               434
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               95, 19
               

               Conread position:
               17-629
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 120
               

               Conread position:
               18-693
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               24-658
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 171
               

               Conread position:
               26-688
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 300
               

               Conread position:
               34-677
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               415
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               35-680
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               45-405
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               120, 77
               

               Conread position:
               54-689
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               54-689
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               59-623
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               62-678
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 54
               

               Conread position:
               65-678
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 66
               

               Conread position:
               68-726
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               418
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               69-386
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 111
               

               Conread position:
               77-641
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               95-689
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               100-396
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               26, 224
               

               Conread position:
               102-680
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               114-389
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               123-678
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 195
               

               Conread position:
               128-693
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               148-477
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               148-627
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               148-693
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               185-659
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 132
               

               Conread position:
               199-688
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               326
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 5
               

               Conread position:
               225-623
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               66, 114
               

               Conread position:
               227-456
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 103
               

               Conread position:
               238-602
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               161, 49
               

               Conread position:
               251-689
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 69
               

               Conread position:
               254-689
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               138, 63
               

               Conread position:
               257-689
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               266-681
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               132, 51
               

               Conread position:
               269-455
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               283-689
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               290
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               111, 17
               

               Conread position:
               284-536
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               286-707
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               294
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               110, 24
               

               Conread position:
               307-678
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               333-678
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               347-689
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               350-676
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 185
               

               Conread position:
               362-675
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 226
               

               Conread position:
               439-693
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               47, 253
               
Show alignments to all cow chromosomes.