Cow genome map
| Conread name: | Utr1-UTR010050E01 |
| Conread position: | 1-444 |
| Cow position: | chr26:27139054-27138606 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 140 |
| Conread position: | 1-464 |
| Cow position: | chr26:1884315-1883831 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 329 |
| Conread position: | 1-478 |
| Cow position: | chr26:19012457-19012922 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 59 |
| Conread position: | 1-494 |
| Cow position: | chr26:14176071-14175562 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 1-519 |
| Cow position: | chr26:10459574-10460122 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 1-634 |
| Cow position: | chr26:25341377-25340746 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 27 |
| Conread position: | 1-647 |
| Cow position: | chr26:12667985-12668640 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 1-689 |
| Cow position: | chr26:30586828-30586117 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 242 |
| Conread position: | 2-506 |
| Cow position: | chr26:8087600-8088106 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 43 |
| Conread position: | 3-402 |
| Cow position: | chr26:4440941-4441346 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 323 |
| Conread position: | 3-402 |
| Cow position: | chr26:35561725-35562135 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 328 |
| Conread position: | 3-477 |
| Cow position: | chr26:30785294-30785782 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 323 |
| Conread position: | 3-586 |
| Cow position: | chr26:3028103-3027490 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 310 |
| Conread position: | 3-648 |
| Cow position: | chr26:4122187-4122857 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 309 |
| Conread position: | 3-689 |
| Cow position: | chr26:8884372-8885072 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 3-689 |
| Cow position: | chr26:9114556-9115267 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 3-689 |
| Cow position: | chr26:13807499-13806799 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 3-689 |
| Cow position: | chr26:35122723-35122014 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 323 |
| Conread position: | 3-693 |
| Cow position: | chr26:12586017-12585305 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 275 |
| Conread position: | 4-689 |
| Cow position: | chr26:2349650-2348943 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 4-693 |
| Cow position: | chr26:8872367-8873079 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 198 |
| Conread position: | 9-689 |
| Cow position: | chr26:28707534-28706830 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 317 |
| Conread position: | 10-432 |
| Cow position: | chr26:29089967-29089544 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 12-691 |
| Cow position: | chr26:28646161-28645507 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 434 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 17-629 |
| Cow position: | chr26:18035447-18036074 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 18-693 |
| Cow position: | chr26:34264503-34265197 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 43 |
| Conread position: | 24-658 |
| Cow position: | chr26:3705189-3705841 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 171 |
| Conread position: | 26-688 |
| Cow position: | chr26:1087734-1088411 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 300 |
| Conread position: | 34-677 |
| Cow position: | chr26:7020604-7021273 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 415 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 35-680 |
| Cow position: | chr26:30626044-30625391 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 45-405 |
| Cow position: | chr26:20554655-20554302 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 120, 77 |
| Conread position: | 54-689 |
| Cow position: | chr26:1389564-1390210 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 54-689 |
| Cow position: | chr26:14488678-14488027 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 59-623 |
| Cow position: | chr26:2605350-2604778 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 62-678 |
| Cow position: | chr26:34553497-34552889 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 54 |
| Conread position: | 65-678 |
| Cow position: | chr26:15551554-15550929 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 66 |
| Conread position: | 68-726 |
| Cow position: | chr26:14144845-14144205 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 418 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 69-386 |
| Cow position: | chr26:8647678-8647984 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 77-641 |
| Cow position: | chr26:1638437-1637853 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 95-689 |
| Cow position: | chr26:33911419-33910843 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 100-396 |
| Cow position: | chr26:6793028-6793328 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 26, 224 |
| Conread position: | 102-680 |
| Cow position: | chr26:35335584-35334990 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 114-389 |
| Cow position: | chr26:19564815-19564547 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 123-678 |
| Cow position: | chr26:27987947-27987371 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 128-693 |
| Cow position: | chr26:1347327-1346761 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 148-477 |
| Cow position: | chr26:18781867-18781532 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 170 |
| Conread position: | 148-627 |
| Cow position: | chr26:34271743-34272239 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 170 |
| Conread position: | 148-693 |
| Cow position: | chr26:18804691-18804137 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 170 |
| Conread position: | 185-659 |
| Cow position: | chr26:2671064-2670574 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 132 |
| Conread position: | 199-688 |
| Cow position: | chr26:11289881-11290378 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 326 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 12, 5 |
| Conread position: | 225-623 |
| Cow position: | chr26:21823881-21823469 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 66, 114 |
| Conread position: | 227-456 |
| Cow position: | chr26:17329259-17329491 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 103 |
| Conread position: | 238-602 |
| Cow position: | chr26:2436437-2436070 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 161, 49 |
| Conread position: | 251-689 |
| Cow position: | chr26:17429699-17429247 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 69 |
| Conread position: | 254-689 |
| Cow position: | chr26:3230248-3230696 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 138, 63 |
| Conread position: | 257-689 |
| Cow position: | chr26:26280632-26281071 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 266-681 |
| Cow position: | chr26:3754833-3755243 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 132, 51 |
| Conread position: | 269-455 |
| Cow position: | chr26:233978-233786 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 283-689 |
| Cow position: | chr26:26285671-26286087 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 111, 17 |
| Conread position: | 284-536 |
| Cow position: | chr26:22619203-22619471 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 30 |
| Conread position: | 286-707 |
| Cow position: | chr26:35149055-35148626 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 294 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 307-678 |
| Cow position: | chr26:10699660-10699277 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 333-678 |
| Cow position: | chr26:13183166-13183529 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 347-689 |
| Cow position: | chr26:35191675-35191319 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 350-676 |
| Cow position: | chr26:26312734-26313074 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 362-675 |
| Cow position: | chr26:31793613-31793942 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 226 |
| Conread position: | 439-693 |
| Cow position: | chr26:8428035-8427770 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 253 |
Show alignments to all cow chromosomes.