Cow genome map


           Conread name:
           Utr1-UTR010050E01
        

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               278
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 325
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               1-678
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 52
               

               Conread position:
               1-678
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 327
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               1-693
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 56
               

               Conread position:
               1-703
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               1-704
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 180
               

               Conread position:
               2-689
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 80
               

               Conread position:
               2-693
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 325
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 309
               

               Conread position:
               3-678
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 58
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 232
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 58
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 323
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 323
               

               Conread position:
               3-714
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               3-723
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 323
               

               Conread position:
               17-477
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 310
               

               Conread position:
               17-681
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 102
               

               Conread position:
               18-488
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 317
               

               Conread position:
               18-640
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 320
               

               Conread position:
               18-687
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 96
               

               Conread position:
               25-689
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 234
               

               Conread position:
               42-678
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               54-678
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 6
               

               Conread position:
               54-693
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               59-592
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               350
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 35
               

               Conread position:
               60-478
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               68-693
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               407
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               78-476
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 65
               

               Conread position:
               90-392
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               36, 158
               

               Conread position:
               91-392
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 229
               

               Conread position:
               95-649
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 93
               

               Conread position:
               99-459
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               100-391
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               118-704
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               119-658
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 75
               

               Conread position:
               124-465
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               41, 200
               

               Conread position:
               124-678
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 198
               

               Conread position:
               135-402
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               30, 183
               

               Conread position:
               135-433
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               261, 59
               

               Conread position:
               135-678
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 183
               

               Conread position:
               147-689
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               166-669
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 110
               

               Conread position:
               169-429
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               169-650
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 134
               

               Conread position:
               178-477
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               216, 139
               

               Conread position:
               178-689
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 142
               

               Conread position:
               188-451
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               197, 129
               

               Conread position:
               188-651
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 42
               

               Conread position:
               192-567
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               137, 45
               

               Conread position:
               216-716
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               175, 80
               

               Conread position:
               223-539
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               224-392
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               246-693
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 71
               

               Conread position:
               252-485
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               262-451
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               126, 13
               

               Conread position:
               269-704
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               272-677
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               272-711
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               304-488
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               307-689
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               319-681
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 143
               

               Conread position:
               321-666
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               333-620
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 247
               

               Conread position:
               368-678
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               30, 162
               

               Conread position:
               375-559
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 142
               

               Conread position:
               382-675
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 201
               

               Conread position:
               386-648
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 186
               

               Conread position:
               386-689
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               427-689
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               437-666
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 135
               
Show alignments to all cow chromosomes.