Cow genome map
Conread name: | Utr1-UTR010050E01 |
Conread position: | 1-401 |
Cow position: | chr27:26552949-26552562 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 278 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 49, 27 |
Conread position: | 1-448 |
Cow position: | chr27:8200279-8200740 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 325 |
Conread position: | 1-477 |
Cow position: | chr27:22722840-22723316 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 24 |
Conread position: | 1-678 |
Cow position: | chr27:4981852-4982546 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 52 |
Conread position: | 1-678 |
Cow position: | chr27:15273603-15272894 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 327 |
Conread position: | 1-689 |
Cow position: | chr27:3233049-3232351 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 481 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 103 |
Conread position: | 1-689 |
Cow position: | chr27:20809887-20810604 (view UCSC Genome Browser custom track) |
Alignm length: | 725 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 102 |
Conread position: | 1-693 |
Cow position: | chr27:23318443-23317754 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 56 |
Conread position: | 1-703 |
Cow position: | chr27:1905084-1904393 (view UCSC Genome Browser custom track) |
Alignm length: | 724 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 15 |
Conread position: | 1-704 |
Cow position: | chr27:9990739-9989992 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 180 |
Conread position: | 2-689 |
Cow position: | chr27:1535659-1536353 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 80 |
Conread position: | 2-693 |
Cow position: | chr27:8960557-8959841 (view UCSC Genome Browser custom track) |
Alignm length: | 724 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 325 |
Conread position: | 3-477 |
Cow position: | chr27:18696815-18697303 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 309 |
Conread position: | 3-678 |
Cow position: | chr27:17567591-17568275 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 58 |
Conread position: | 3-689 |
Cow position: | chr27:1520155-1520863 (view UCSC Genome Browser custom track) |
Alignm length: | 718 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 232 |
Conread position: | 3-689 |
Cow position: | chr27:5984552-5983847 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 58 |
Conread position: | 3-689 |
Cow position: | chr27:13352771-13353489 (view UCSC Genome Browser custom track) |
Alignm length: | 724 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 323 |
Conread position: | 3-689 |
Cow position: | chr27:16031923-16031214 (view UCSC Genome Browser custom track) |
Alignm length: | 718 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 323 |
Conread position: | 3-714 |
Cow position: | chr27:24114627-24115338 (view UCSC Genome Browser custom track) |
Alignm length: | 741 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 11 |
Conread position: | 3-723 |
Cow position: | chr27:12147169-12146424 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 323 |
Conread position: | 17-477 |
Cow position: | chr27:26599416-26599875 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 310 |
Conread position: | 17-681 |
Cow position: | chr27:31267723-31268393 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 102 |
Conread position: | 18-488 |
Cow position: | chr27:28923493-28923979 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 317 |
Conread position: | 18-640 |
Cow position: | chr27:30571310-30571965 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 320 |
Conread position: | 18-687 |
Cow position: | chr27:14296715-14297388 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 96 |
Conread position: | 25-689 |
Cow position: | chr27:21450938-21451627 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 234 |
Conread position: | 42-678 |
Cow position: | chr27:27500762-27501383 (view UCSC Genome Browser custom track) |
Alignm length: | 653 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 18 |
Conread position: | 54-678 |
Cow position: | chr27:30584627-30583992 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 6 |
Conread position: | 54-693 |
Cow position: | chr27:29036840-29036192 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 6 |
Conread position: | 59-592 |
Cow position: | chr27:7586727-7587265 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 350 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 69, 35 |
Conread position: | 60-478 |
Cow position: | chr27:6017187-6017603 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 267 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 118, 20 |
Conread position: | 68-693 |
Cow position: | chr27:22260830-22260183 (view UCSC Genome Browser custom track) |
Alignm length: | 658 |
Alignm identity: | 407 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 59, 32 |
Conread position: | 78-476 |
Cow position: | chr27:28686144-28685739 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 65 |
Conread position: | 90-392 |
Cow position: | chr27:20761251-20761552 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 36, 158 |
Conread position: | 91-392 |
Cow position: | chr27:2380153-2380456 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 229 |
Conread position: | 95-649 |
Cow position: | chr27:29375552-29374997 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 93 |
Conread position: | 99-459 |
Cow position: | chr27:2896910-2897276 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 60 |
Conread position: | 100-391 |
Cow position: | chr27:1498628-1498913 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 202 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 15, 72 |
Conread position: | 118-704 |
Cow position: | chr27:15405249-15405839 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 116 |
Conread position: | 119-658 |
Cow position: | chr27:30035410-30035974 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 75 |
Conread position: | 124-465 |
Cow position: | chr27:11350867-11350520 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 236 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 41, 200 |
Conread position: | 124-678 |
Cow position: | chr27:25801602-25801031 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 198 |
Conread position: | 135-402 |
Cow position: | chr27:26452811-26452547 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 183 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 30, 183 |
Conread position: | 135-433 |
Cow position: | chr27:22821816-22821521 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 201 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 261, 59 |
Conread position: | 135-678 |
Cow position: | chr27:15543629-15544189 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 183 |
Conread position: | 147-689 |
Cow position: | chr27:10578554-10579130 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 89 |
Conread position: | 166-669 |
Cow position: | chr27:865254-865788 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 110 |
Conread position: | 169-429 |
Cow position: | chr27:2348492-2348749 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 183 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 169-650 |
Cow position: | chr27:22648257-22647760 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 134 |
Conread position: | 178-477 |
Cow position: | chr27:773433-773737 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 209 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 216, 139 |
Conread position: | 178-689 |
Cow position: | chr27:8426517-8427040 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 142 |
Conread position: | 188-451 |
Cow position: | chr27:15874415-15874152 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 188 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 197, 129 |
Conread position: | 188-651 |
Cow position: | chr27:24064569-24065041 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 42 |
Conread position: | 192-567 |
Cow position: | chr27:16582791-16582402 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 273 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 137, 45 |
Conread position: | 216-716 |
Cow position: | chr27:13919342-13919835 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 327 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 175, 80 |
Conread position: | 223-539 |
Cow position: | chr27:12172271-12172589 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 216 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 9, 91 |
Conread position: | 224-392 |
Cow position: | chr27:12176535-12176698 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 20, 81 |
Conread position: | 246-693 |
Cow position: | chr27:1082437-1081974 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 71 |
Conread position: | 252-485 |
Cow position: | chr27:29006089-29006333 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 104, 48 |
Conread position: | 262-451 |
Cow position: | chr27:28894737-28894930 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 126, 13 |
Conread position: | 269-704 |
Cow position: | chr27:27044932-27045388 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 300 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 120, 45 |
Conread position: | 272-677 |
Cow position: | chr27:616018-615608 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 262 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 24, 41 |
Conread position: | 272-711 |
Cow position: | chr27:25873395-25873838 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 42 |
Conread position: | 304-488 |
Cow position: | chr27:12164205-12164017 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 142 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 14, 73 |
Conread position: | 307-689 |
Cow position: | chr27:3759659-3760051 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 272 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 87, 25 |
Conread position: | 319-681 |
Cow position: | chr27:17422388-17422761 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 260 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 72, 143 |
Conread position: | 321-666 |
Cow position: | chr27:25971800-25971441 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 244 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 73, 12 |
Conread position: | 333-620 |
Cow position: | chr27:29447266-29446960 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 204 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 61, 247 |
Conread position: | 368-678 |
Cow position: | chr27:31249094-31249416 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 222 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 30, 162 |
Conread position: | 375-559 |
Cow position: | chr27:21684467-21684275 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 12, 142 |
Conread position: | 382-675 |
Cow position: | chr27:31547685-31547366 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 217 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 10, 201 |
Conread position: | 386-648 |
Cow position: | chr27:7911852-7912124 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 187 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 24, 186 |
Conread position: | 386-689 |
Cow position: | chr27:27556677-27556989 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 221 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 20, 138 |
Conread position: | 427-689 |
Cow position: | chr27:13308556-13308827 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 196 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 50, 98 |
Conread position: | 437-666 |
Cow position: | chr27:1845954-1845715 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 167 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 37, 135 |
Show alignments to all cow chromosomes.