Cow genome map

Conread name: Utr1-UTR010050E01

Conread position: 1-435
Cow position:
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 1-474
Cow position:
Alignm length: 493
Alignm identity: 323
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 227

Conread position: 1-477
Cow position:
Alignm length: 489
Alignm identity: 321
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 34, 132

Conread position: 1-604
Cow position:
Alignm length: 636
Alignm identity: 410
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 38

Conread position: 1-663
Cow position:
Alignm length: 693
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 1-672
Cow position:
Alignm length: 699
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 191

Conread position: 1-675
Cow position:
Alignm length: 705
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 60

Conread position: 1-678
Cow position:
Alignm length: 707
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-678
Cow position:
Alignm length: 705
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 1-678
Cow position:
Alignm length: 717
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 13

Conread position: 1-681
Cow position:
Alignm length: 703
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 16

Conread position: 1-681
Cow position:
Alignm length: 709
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 303

Conread position: 1-689
Cow position:
Alignm length: 715
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 322

Conread position: 1-689
Cow position:
Alignm length: 738
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 344

Conread position: 1-689
Cow position:
Alignm length: 716
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 50

Conread position: 1-689
Cow position:
Alignm length: 719
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 316

Conread position: 1-689
Cow position:
Alignm length: 718
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-689
Cow position:
Alignm length: 717
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 324

Conread position: 1-689
Cow position:
Alignm length: 718
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-693
Cow position:
Alignm length: 736
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 323

Conread position: 1-693
Cow position:
Alignm length: 741
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 217

Conread position: 1-704
Cow position:
Alignm length: 744
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 339

Conread position: 2-666
Cow position:
Alignm length: 690
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 154

Conread position: 3-392
Cow position:
Alignm length: 392
Alignm identity: 266
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 36

Conread position: 3-451
Cow position:
Alignm length: 457
Alignm identity: 306
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 391, 50

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 232

Conread position: 3-689
Cow position:
Alignm length: 714
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 59

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 237

Conread position: 3-689
Cow position:
Alignm length: 717
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 3-689
Cow position:
Alignm length: 713
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 321

Conread position: 3-689
Cow position:
Alignm length: 711
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-689
Cow position:
Alignm length: 716
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 3-689
Cow position:
Alignm length: 720
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 141

Conread position: 3-693
Cow position:
Alignm length: 723
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-693
Cow position:
Alignm length: 721
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 326

Conread position: 3-693
Cow position:
Alignm length: 721
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-693
Cow position:
Alignm length: 727
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 312

Conread position: 3-693
Cow position:
Alignm length: 723
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-696
Cow position:
Alignm length: 721
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 72

Conread position: 4-689
Cow position:
Alignm length: 722
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 99

Conread position: 5-665
Cow position:
Alignm length: 683
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 8-699
Cow position:
Alignm length: 721
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 74

Conread position: 9-693
Cow position:
Alignm length: 717
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 146

Conread position: 11-689
Cow position:
Alignm length: 708
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 17-715
Cow position:
Alignm length: 716
Alignm identity: 444
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 34, 68

Conread position: 18-568
Cow position:
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 130

Conread position: 18-689
Cow position:
Alignm length: 704
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 183

Conread position: 18-692
Cow position:
Alignm length: 699
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 92

Conread position: 25-681
Cow position:
Alignm length: 674
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 89

Conread position: 28-707
Cow position:
Alignm length: 713
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 179

Conread position: 31-689
Cow position:
Alignm length: 688
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 35-692
Cow position:
Alignm length: 689
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 311

Conread position: 42-675
Cow position:
Alignm length: 669
Alignm identity: 429
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 8, 60

Conread position: 42-693
Cow position:
Alignm length: 678
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 127

Conread position: 54-675
Cow position:
Alignm length: 643
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 55-689
Cow position:
Alignm length: 659
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 267

Conread position: 58-630
Cow position:
Alignm length: 597
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 58

Conread position: 59-477
Cow position:
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 263

Conread position: 59-653
Cow position:
Alignm length: 641
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 126

Conread position: 59-693
Cow position:
Alignm length: 662
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 60-446
Cow position:
Alignm length: 402
Alignm identity: 276
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 81, 39

Conread position: 60-690
Cow position:
Alignm length: 657
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 123

Conread position: 69-478
Cow position:
Alignm length: 418
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 117

Conread position: 69-494
Cow position:
Alignm length: 441
Alignm identity: 295
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 98

Conread position: 69-694
Cow position:
Alignm length: 651
Alignm identity: 415
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 76, 30

Conread position: 71-689
Cow position:
Alignm length: 645
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 143

Conread position: 73-689
Cow position:
Alignm length: 635
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 38

Conread position: 74-678
Cow position:
Alignm length: 632
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 158

Conread position: 78-690
Cow position:
Alignm length: 642
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 80-690
Cow position:
Alignm length: 635
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 94-698
Cow position:
Alignm length: 637
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 176

Conread position: 103-704
Cow position:
Alignm length: 621
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 28

Conread position: 106-689
Cow position:
Alignm length: 609
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 216

Conread position: 117-402
Cow position:
Alignm length: 288
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 81

Conread position: 119-401
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 46, 105

Conread position: 120-690
Cow position:
Alignm length: 593
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 128-599
Cow position:
Alignm length: 493
Alignm identity: 331
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 37, 51

Conread position: 128-705
Cow position:
Alignm length: 596
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 143

Conread position: 135-675
Cow position:
Alignm length: 564
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 124

Conread position: 144-725
Cow position:
Alignm length: 599
Alignm identity: 382
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 33

Conread position: 145-689
Cow position:
Alignm length: 559
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 149-689
Cow position:
Alignm length: 563
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 155

Conread position: 166-689
Cow position:
Alignm length: 539
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 151

Conread position: 172-628
Cow position:
Alignm length: 475
Alignm identity: 312
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 27

Conread position: 179-607
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 124

Conread position: 179-700
Cow position:
Alignm length: 546
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 153

Conread position: 188-678
Cow position:
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 112

Conread position: 198-689
Cow position:
Alignm length: 514
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 119

Conread position: 208-693
Cow position:
Alignm length: 500
Alignm identity: 322
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 182, 107

Conread position: 216-696
Cow position:
Alignm length: 498
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 88

Conread position: 216-706
Cow position:
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 101

Conread position: 219-688
Cow position:
Alignm length: 489
Alignm identity: 320
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 66

Conread position: 223-670
Cow position:
Alignm length: 469
Alignm identity: 302
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 93

Conread position: 226-678
Cow position:
Alignm length: 474
Alignm identity: 298
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 158, 35

Conread position: 231-678
Cow position:
Alignm length: 460
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 69

Conread position: 239-689
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 64

Conread position: 254-464
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 192

Conread position: 264-664
Cow position:
Alignm length: 413
Alignm identity: 271
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 134, 53

Conread position: 269-674
Cow position:
Alignm length: 422
Alignm identity: 286
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 120, 48

Conread position: 276-634
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 61

Conread position: 287-725
Cow position:
Alignm length: 464
Alignm identity: 306
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 101, 45

Conread position: 291-711
Cow position:
Alignm length: 445
Alignm identity: 295
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 99, 30

Conread position: 316-731
Cow position:
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 274

Conread position: 317-663
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 158

Conread position: 317-689
Cow position:
Alignm length: 394
Alignm identity: 263
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 21

Conread position: 327-696
Cow position:
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 9

Conread position: 333-681
Cow position:
Alignm length: 365
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 215

Conread position: 333-689
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 61, 200

Conread position: 333-693
Cow position:
Alignm length: 384
Alignm identity: 262
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 200

Conread position: 338-715
Cow position:
Alignm length: 392
Alignm identity: 261
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 56, 94

Conread position: 340-548
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 340-579
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 342-623
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 164

Conread position: 347-689
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 240

Conread position: 350-678
Cow position:
Alignm length: 350
Alignm identity: 241
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 48, 33

Conread position: 350-689
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 164

Conread position: 355-689
Cow position:
Alignm length: 352
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 231

Conread position: 358-606
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 224

Conread position: 360-689
Cow position:
Alignm length: 350
Alignm identity: 230
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 229

Conread position: 369-689
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 25, 164

Conread position: 386-689
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 141

Conread position: 421-722
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 161

Conread position: 427-689
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 98

Conread position: 429-707
Cow position:
Alignm length: 283
Alignm identity: 190
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 33, 119

Show alignments to all cow chromosomes.