Cow genome map

Conread name: Utr1-UTR010050E01

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 102

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 217

Conread position: 1-455
Cow position:
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 16

Conread position: 1-477
Cow position:
Alignm length: 495
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 103

Conread position: 1-677
Cow position:
Alignm length: 707
Alignm identity: 446
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 47, 16

Conread position: 1-678
Cow position:
Alignm length: 714
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 52

Conread position: 1-678
Cow position:
Alignm length: 710
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 53

Conread position: 1-678
Cow position:
Alignm length: 696
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 1-689
Cow position:
Alignm length: 717
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 312

Conread position: 1-696
Cow position:
Alignm length: 729
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 197

Conread position: 1-696
Cow position:
Alignm length: 726
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 229

Conread position: 1-696
Cow position:
Alignm length: 705
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 70

Conread position: 1-716
Cow position:
Alignm length: 745
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 178

Conread position: 2-478
Cow position:
Alignm length: 497
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 2-689
Cow position:
Alignm length: 717
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 2-693
Cow position:
Alignm length: 731
Alignm identity: 464
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 109

Conread position: 3-402
Cow position:
Alignm length: 411
Alignm identity: 267
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 170

Conread position: 3-455
Cow position:
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 338

Conread position: 3-455
Cow position:
Alignm length: 468
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 110

Conread position: 3-477
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 190

Conread position: 3-539
Cow position:
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-559
Cow position:
Alignm length: 587
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-678
Cow position:
Alignm length: 709
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 36

Conread position: 3-686
Cow position:
Alignm length: 713
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-689
Cow position:
Alignm length: 711
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 51

Conread position: 3-689
Cow position:
Alignm length: 723
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 3-689
Cow position:
Alignm length: 716
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 184

Conread position: 3-689
Cow position:
Alignm length: 715
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-689
Cow position:
Alignm length: 708
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 140

Conread position: 3-689
Cow position:
Alignm length: 713
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-689
Cow position:
Alignm length: 710
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 142

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position:
Alignm length: 715
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 51

Conread position: 3-689
Cow position:
Alignm length: 718
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-689
Cow position:
Alignm length: 714
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 132

Conread position: 3-693
Cow position:
Alignm length: 721
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-693
Cow position:
Alignm length: 722
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-693
Cow position:
Alignm length: 719
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-703
Cow position:
Alignm length: 722
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 182

Conread position: 3-704
Cow position:
Alignm length: 739
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 309

Conread position: 3-707
Cow position:
Alignm length: 736
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 85

Conread position: 9-477
Cow position:
Alignm length: 486
Alignm identity: 323
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 40, 111

Conread position: 9-692
Cow position:
Alignm length: 704
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 52

Conread position: 9-716
Cow position:
Alignm length: 723
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 107

Conread position: 13-477
Cow position:
Alignm length: 480
Alignm identity: 309
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 189

Conread position: 17-450
Cow position:
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 44

Conread position: 17-650
Cow position:
Alignm length: 672
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 18-694
Cow position:
Alignm length: 706
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 18-704
Cow position:
Alignm length: 716
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 292

Conread position: 18-707
Cow position:
Alignm length: 719
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 42

Conread position: 18-711
Cow position:
Alignm length: 717
Alignm identity: 463
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 63, 36

Conread position: 20-678
Cow position:
Alignm length: 680
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 122

Conread position: 21-654
Cow position:
Alignm length: 657
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 36

Conread position: 42-678
Cow position:
Alignm length: 665
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 15

Conread position: 45-694
Cow position:
Alignm length: 686
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 12

Conread position: 54-477
Cow position:
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 6

Conread position: 54-674
Cow position:
Alignm length: 640
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 9

Conread position: 54-698
Cow position:
Alignm length: 672
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 54-716
Cow position:
Alignm length: 696
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 18

Conread position: 59-457
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 77, 19

Conread position: 59-693
Cow position:
Alignm length: 668
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 263

Conread position: 60-614
Cow position:
Alignm length: 567
Alignm identity: 350
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 182, 77

Conread position: 67-678
Cow position:
Alignm length: 629
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 159

Conread position: 68-678
Cow position:
Alignm length: 626
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 118

Conread position: 68-679
Cow position:
Alignm length: 642
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 101

Conread position: 74-478
Cow position:
Alignm length: 413
Alignm identity: 275
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 315, 47

Conread position: 82-607
Cow position:
Alignm length: 549
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 86-460
Cow position:
Alignm length: 385
Alignm identity: 255
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 16

Conread position: 87-622
Cow position:
Alignm length: 559
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 148

Conread position: 88-696
Cow position:
Alignm length: 621
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 96

Conread position: 93-534
Cow position:
Alignm length: 472
Alignm identity: 320
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 77

Conread position: 98-689
Cow position:
Alignm length: 619
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 224

Conread position: 100-452
Cow position:
Alignm length: 368
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 108

Conread position: 100-692
Cow position:
Alignm length: 623
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 222

Conread position: 101-665
Cow position:
Alignm length: 585
Alignm identity: 373
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 76

Conread position: 102-717
Cow position:
Alignm length: 644
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 110

Conread position: 108-711
Cow position:
Alignm length: 619
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 9

Conread position: 120-689
Cow position:
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 120-689
Cow position:
Alignm length: 592
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 124-401
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 194

Conread position: 124-605
Cow position:
Alignm length: 505
Alignm identity: 335
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 270, 31

Conread position: 124-678
Cow position:
Alignm length: 582
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 195

Conread position: 124-689
Cow position:
Alignm length: 588
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 142

Conread position: 125-709
Cow position:
Alignm length: 596
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 108

Conread position: 135-677
Cow position:
Alignm length: 551
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 104

Conread position: 147-689
Cow position:
Alignm length: 557
Alignm identity: 349
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 205, 8

Conread position: 148-476
Cow position:
Alignm length: 336
Alignm identity: 219
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 17, 159

Conread position: 148-661
Cow position:
Alignm length: 537
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 156

Conread position: 149-450
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 16, 172

Conread position: 149-689
Cow position:
Alignm length: 563
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 169

Conread position: 150-478
Cow position:
Alignm length: 347
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 145, 31

Conread position: 152-689
Cow position:
Alignm length: 556
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 205

Conread position: 155-715
Cow position:
Alignm length: 586
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 140

Conread position: 165-693
Cow position:
Alignm length: 537
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 86

Conread position: 166-689
Cow position:
Alignm length: 546
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 137

Conread position: 166-689
Cow position:
Alignm length: 551
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 148

Conread position: 168-689
Cow position:
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 85

Conread position: 168-704
Cow position:
Alignm length: 550
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 150

Conread position: 169-489
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 152

Conread position: 176-627
Cow position:
Alignm length: 468
Alignm identity: 182
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 352

Conread position: 176-678
Cow position:
Alignm length: 534
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 139

Conread position: 188-665
Cow position:
Alignm length: 506
Alignm identity: 340
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 206, 84

Conread position: 189-654
Cow position:
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 114

Conread position: 189-689
Cow position:
Alignm length: 522
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 114

Conread position: 190-689
Cow position:
Alignm length: 524
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 129

Conread position: 204-675
Cow position:
Alignm length: 492
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 40

Conread position: 210-689
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 179, 120

Conread position: 212-678
Cow position:
Alignm length: 489
Alignm identity: 324
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 177, 105

Conread position: 212-693
Cow position:
Alignm length: 505
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 105

Conread position: 221-392
Cow position:
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 100

Conread position: 229-590
Cow position:
Alignm length: 381
Alignm identity: 254
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 54, 118

Conread position: 231-689
Cow position:
Alignm length: 480
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 73

Conread position: 236-687
Cow position:
Alignm length: 461
Alignm identity: 299
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 100

Conread position: 237-678
Cow position:
Alignm length: 459
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 51

Conread position: 242-564
Cow position:
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 23

Conread position: 242-663
Cow position:
Alignm length: 443
Alignm identity: 288
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 158, 75

Conread position: 243-678
Cow position:
Alignm length: 461
Alignm identity: 307
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 72

Conread position: 247-678
Cow position:
Alignm length: 451
Alignm identity: 291
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 147, 175

Conread position: 253-732
Cow position:
Alignm length: 497
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 67

Conread position: 269-603
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 200

Conread position: 269-689
Cow position:
Alignm length: 443
Alignm identity: 297
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 125, 48

Conread position: 272-635
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 76, 62

Conread position: 279-689
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 24

Conread position: 281-648
Cow position:
Alignm length: 388
Alignm identity: 255
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 18

Conread position: 283-669
Cow position:
Alignm length: 403
Alignm identity: 279
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 30

Conread position: 291-659
Cow position:
Alignm length: 386
Alignm identity: 251
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 103, 39

Conread position: 310-714
Cow position:
Alignm length: 433
Alignm identity: 290
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 79

Conread position: 316-641
Cow position:
Alignm length: 345
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 78, 16

Conread position: 317-693
Cow position:
Alignm length: 402
Alignm identity: 278
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 218

Conread position: 324-663
Cow position:
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 151

Conread position: 333-709
Cow position:
Alignm length: 387
Alignm identity: 253
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 61, 103

Conread position: 337-675
Cow position:
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 19

Conread position: 346-689
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 94

Conread position: 346-689
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 243

Conread position: 348-689
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 166

Conread position: 350-673
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 18

Conread position: 362-612
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 171

Conread position: 362-693
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 218

Conread position: 368-640
Cow position:
Alignm length: 285
Alignm identity: 187
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 204

Conread position: 368-689
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 223

Conread position: 385-707
Cow position:
Alignm length: 332
Alignm identity: 219
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 73

Conread position: 387-633
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 409-680
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 168

Conread position: 416-707
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 156

Show alignments to all cow chromosomes.