Cow genome map

Conread name: Utr1-UTR010050E01

Conread position: 1-394
Cow position: chrX:45417314-45416918 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 263
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 96

Conread position: 1-396
Cow position: chrX:35887377-35887779 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 70

Conread position: 1-477
Cow position: chrX:22126489-22126011 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 241

Conread position: 1-605
Cow position: chrX:16406865-16407465 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 402
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 70

Conread position: 1-621
Cow position: chrX:38149884-38150526 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 325

Conread position: 1-624
Cow position: chrX:30112419-30113035 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 1-663
Cow position: chrX:4766995-4767670 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 53

Conread position: 1-663
Cow position: chrX:22810180-22810866 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-669
Cow position: chrX:11743576-11744247 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 68

Conread position: 1-669
Cow position: chrX:17611158-17610474 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 1-669
Cow position: chrX:20870929-20870243 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 96

Conread position: 1-670
Cow position: chrX:39564998-39564308 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 70

Conread position: 1-675
Cow position: chrX:12464293-12464991 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 234

Conread position: 1-678
Cow position: chrX:21317751-21318438 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 138

Conread position: 1-678
Cow position: chrX:27317515-27318217 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-680
Cow position: chrX:5279043-5278352 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 206

Conread position: 1-685
Cow position: chrX:21591574-21592286 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 327

Conread position: 1-688
Cow position: chrX:18951446-18950742 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 325

Conread position: 1-689
Cow position: chrX:5640591-5639887 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 197

Conread position: 1-689
Cow position: chrX:16231553-16230879 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 102

Conread position: 1-689
Cow position: chrX:17053856-17054563 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 20

Conread position: 1-689
Cow position: chrX:21581727-21582438 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 120

Conread position: 1-689
Cow position: chrX:23279312-23280022 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 324

Conread position: 1-689
Cow position: chrX:28606796-28606091 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 93

Conread position: 1-689
Cow position: chrX:29098712-29099414 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 109

Conread position: 1-690
Cow position: chrX:387423-388129 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 236

Conread position: 1-690
Cow position: chrX:21646990-21646283 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 20

Conread position: 1-693
Cow position: chrX:26756355-26755639 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 322

Conread position: 1-696
Cow position: chrX:4906706-4905985 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 170

Conread position: 1-696
Cow position: chrX:30054183-30053466 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 185

Conread position: 1-707
Cow position: chrX:13888187-13888901 (view UCSC Genome Browser custom track)
Alignm length: 730
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 164

Conread position: 1-709
Cow position: chrX:18899529-18898824 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 38

Conread position: 1-772
Cow position: chrX:164209-164990 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 73

Conread position: 2-676
Cow position: chrX:16068075-16067390 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 2-689
Cow position: chrX:15378345-15377668 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 14

Conread position: 2-689
Cow position: chrX:22818362-22819073 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 322

Conread position: 3-402
Cow position: chrX:13243945-13244350 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-457
Cow position: chrX:16539764-16540222 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 3-464
Cow position: chrX:21413885-21414356 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 94

Conread position: 3-477
Cow position: chrX:5281492-5281010 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-542
Cow position: chrX:37814437-37815003 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-568
Cow position: chrX:12345225-12345819 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 182

Conread position: 3-568
Cow position: chrX:30167788-30167203 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 225

Conread position: 3-570
Cow position: chrX:22331486-22330899 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 329

Conread position: 3-610
Cow position: chrX:2486943-2487559 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-641
Cow position: chrX:3466071-3465411 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-642
Cow position: chrX:3418931-3418266 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 324

Conread position: 3-663
Cow position: chrX:28667643-28666982 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 185

Conread position: 3-678
Cow position: chrX:16710253-16710942 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 80

Conread position: 3-678
Cow position: chrX:18221706-18222399 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-678
Cow position: chrX:29095028-29094332 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-681
Cow position: chrX:30181638-30180935 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 323

Conread position: 3-689
Cow position: chrX:672701-671998 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-689
Cow position: chrX:2560658-2559965 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 89

Conread position: 3-689
Cow position: chrX:2578713-2579414 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 51

Conread position: 3-689
Cow position: chrX:5865428-5866141 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 326

Conread position: 3-689
Cow position: chrX:6580231-6580930 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 3-689
Cow position: chrX:7754193-7754901 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position: chrX:10529500-10528789 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 325

Conread position: 3-689
Cow position: chrX:11458523-11457819 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 3-689
Cow position: chrX:12308476-12307767 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position: chrX:13072159-13071450 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-689
Cow position: chrX:13092719-13092010 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-689
Cow position: chrX:15261330-15260620 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 324

Conread position: 3-689
Cow position: chrX:15978665-15977958 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 3-689
Cow position: chrX:16045259-16045968 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 8

Conread position: 3-689
Cow position: chrX:18657514-18656810 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-689
Cow position: chrX:19398063-19398773 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 324

Conread position: 3-689
Cow position: chrX:20357713-20357004 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-689
Cow position: chrX:21792865-21793585 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 321

Conread position: 3-689
Cow position: chrX:22565398-22564688 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-689
Cow position: chrX:24770568-24769861 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 182

Conread position: 3-689
Cow position: chrX:29171494-29170786 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 309

Conread position: 3-689
Cow position: chrX:30164942-30164241 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 275

Conread position: 3-689
Cow position: chrX:31495023-31495732 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 296

Conread position: 3-689
Cow position: chrX:32064875-32064172 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 50

Conread position: 3-689
Cow position: chrX:35532147-35532850 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 8

Conread position: 3-689
Cow position: chrX:36536443-36535734 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 323

Conread position: 3-689
Cow position: chrX:39712840-39713546 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 308

Conread position: 3-692
Cow position: chrX:16781573-16782279 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 14

Conread position: 3-693
Cow position: chrX:2814190-2813483 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 3-693
Cow position: chrX:3082846-3082134 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 51

Conread position: 3-693
Cow position: chrX:13929443-13928742 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 58

Conread position: 3-693
Cow position: chrX:14783058-14782345 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 3-693
Cow position: chrX:19474861-19474148 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 322

Conread position: 3-693
Cow position: chrX:24468833-24468123 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 320

Conread position: 3-693
Cow position: chrX:28587268-28587972 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-696
Cow position: chrX:5360296-5361012 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 3-696
Cow position: chrX:14597143-14597848 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 323

Conread position: 3-696
Cow position: chrX:43437617-43436897 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 323

Conread position: 4-584
Cow position: chrX:9086002-9086605 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 238

Conread position: 8-392
Cow position: chrX:19621654-19622049 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 96

Conread position: 9-387
Cow position: chrX:18919935-18920320 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 9-626
Cow position: chrX:42008923-42009528 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 317

Conread position: 9-675
Cow position: chrX:4327392-4326697 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 147

Conread position: 9-689
Cow position: chrX:21342700-21343390 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 9-689
Cow position: chrX:27984059-27983356 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 164

Conread position: 9-689
Cow position: chrX:31979540-31978845 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 225

Conread position: 9-693
Cow position: chrX:5333135-5332431 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 52

Conread position: 10-693
Cow position: chrX:14461612-14462320 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 12-678
Cow position: chrX:17488324-17487640 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 39

Conread position: 13-441
Cow position: chrX:24171284-24170858 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 17-480
Cow position: chrX:15569611-15569132 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 96

Conread position: 17-631
Cow position: chrX:2606744-2607357 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 410
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 73

Conread position: 17-687
Cow position: chrX:2879421-2878750 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 54

Conread position: 17-690
Cow position: chrX:302405-303113 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 54

Conread position: 18-474
Cow position: chrX:2145275-2145732 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 18-675
Cow position: chrX:28556684-28557349 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 59

Conread position: 18-689
Cow position: chrX:37851447-37852133 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 253

Conread position: 18-698
Cow position: chrX:19877118-19877848 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 475
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 31, 16

Conread position: 21-605
Cow position: chrX:20366865-20366262 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 259

Conread position: 24-675
Cow position: chrX:34008093-34008758 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 302

Conread position: 25-693
Cow position: chrX:26274454-26275139 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 301

Conread position: 37-457
Cow position: chrX:30540145-30539724 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 288
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 48, 29

Conread position: 40-471
Cow position: chrX:37820475-37820904 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 135

Conread position: 45-418
Cow position: chrX:20512228-20511860 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 86, 22

Conread position: 45-669
Cow position: chrX:20588996-20589629 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 213

Conread position: 45-677
Cow position: chrX:39764910-39765543 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 12

Conread position: 45-678
Cow position: chrX:18289741-18289099 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 49

Conread position: 45-689
Cow position: chrX:26231427-26230763 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 278

Conread position: 45-689
Cow position: chrX:29917010-29916351 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 276

Conread position: 47-709
Cow position: chrX:24463100-24462419 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 167

Conread position: 51-478
Cow position: chrX:17260528-17260092 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 221

Conread position: 54-482
Cow position: chrX:2592644-2592232 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 301
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 74, 13

Conread position: 54-689
Cow position: chrX:12144441-12145094 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 6

Conread position: 57-677
Cow position: chrX:23928769-23928168 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 25

Conread position: 58-475
Cow position: chrX:26749920-26749496 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 112

Conread position: 59-396
Cow position: chrX:12178649-12178308 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 26, 31

Conread position: 59-478
Cow position: chrX:35027663-35028078 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 130

Conread position: 60-396
Cow position: chrX:21643051-21642717 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 72, 25

Conread position: 60-586
Cow position: chrX:12312650-12312107 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 147

Conread position: 60-681
Cow position: chrX:24807205-24806589 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 163

Conread position: 60-696
Cow position: chrX:33829392-33830045 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 240

Conread position: 60-699
Cow position: chrX:33536946-33537589 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 263

Conread position: 60-716
Cow position: chrX:13667587-13666948 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 39

Conread position: 61-457
Cow position: chrX:24204344-24204740 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 271
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 39

Conread position: 61-696
Cow position: chrX:22611758-22612405 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 261

Conread position: 62-473
Cow position: chrX:46428351-46427921 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 290
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 120

Conread position: 69-689
Cow position: chrX:5298884-5298245 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 253

Conread position: 70-478
Cow position: chrX:26433751-26434156 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 314, 30

Conread position: 71-452
Cow position: chrX:1013447-1013832 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 117

Conread position: 73-401
Cow position: chrX:15142794-15142470 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 82

Conread position: 77-606
Cow position: chrX:34142012-34141501 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 331
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 68

Conread position: 77-689
Cow position: chrX:11977081-11976450 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 81-689
Cow position: chrX:12997541-12996915 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 155

Conread position: 84-678
Cow position: chrX:30316562-30317152 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 85-651
Cow position: chrX:25016794-25016226 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 83

Conread position: 93-464
Cow position: chrX:34006841-34006478 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 95-689
Cow position: chrX:16278039-16278651 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 229

Conread position: 95-710
Cow position: chrX:23315398-23314790 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 13

Conread position: 97-395
Cow position: chrX:24996217-24995921 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 206

Conread position: 103-673
Cow position: chrX:24110209-24109621 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 120-401
Cow position: chrX:27615085-27615363 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 45, 197

Conread position: 120-679
Cow position: chrX:16036097-16035521 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 199

Conread position: 120-689
Cow position: chrX:16804454-16803872 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 120-689
Cow position: chrX:16809401-16808819 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 121-689
Cow position: chrX:28519300-28518725 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 197

Conread position: 124-633
Cow position: chrX:43074328-43074820 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 338
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 79

Conread position: 127-672
Cow position: chrX:11074729-11074182 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 135-689
Cow position: chrX:5426516-5427086 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 169

Conread position: 135-689
Cow position: chrX:27595800-27595231 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 169

Conread position: 135-689
Cow position: chrX:31201270-31201836 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 31

Conread position: 136-689
Cow position: chrX:40694271-40693737 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 62

Conread position: 136-694
Cow position: chrX:13281894-13282470 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 181

Conread position: 137-693
Cow position: chrX:22492465-22493034 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 181

Conread position: 139-376
Cow position: chrX:13801247-13801021 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 25, 105

Conread position: 139-650
Cow position: chrX:22837414-22837940 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 25

Conread position: 148-693
Cow position: chrX:39561220-39560659 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 170

Conread position: 149-681
Cow position: chrX:26507697-26508222 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 89

Conread position: 151-601
Cow position: chrX:19920637-19920181 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 308
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 243, 27

Conread position: 152-689
Cow position: chrX:25450778-25451331 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 186

Conread position: 156-566
Cow position: chrX:17986332-17985918 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 290
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 9, 37

Conread position: 157-689
Cow position: chrX:16360554-16360012 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 161

Conread position: 161-678
Cow position: chrX:41848082-41847542 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 357
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 11

Conread position: 164-478
Cow position: chrX:509631-509321 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 234, 74

Conread position: 166-477
Cow position: chrX:3144270-3144575 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 230, 68

Conread position: 166-624
Cow position: chrX:22964081-22963595 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 331
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 154

Conread position: 166-689
Cow position: chrX:4623495-4622958 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 137

Conread position: 166-689
Cow position: chrX:21832352-21832881 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 11

Conread position: 166-693
Cow position: chrX:5354842-5354300 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 151

Conread position: 171-397
Cow position: chrX:13179391-13179168 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 26

Conread position: 174-477
Cow position: chrX:18243884-18243577 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 224, 18

Conread position: 178-689
Cow position: chrX:7484277-7484802 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 139

Conread position: 178-689
Cow position: chrX:8640258-8640783 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 139

Conread position: 186-692
Cow position: chrX:24175468-24174952 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 150

Conread position: 188-664
Cow position: chrX:18460618-18460140 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 321
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 201, 59

Conread position: 189-623
Cow position: chrX:8452988-8453404 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 295
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 223, 60

Conread position: 203-689
Cow position: chrX:40828600-40828111 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 320
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 201, 76

Conread position: 204-681
Cow position: chrX:43790315-43789829 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 110

Conread position: 204-689
Cow position: chrX:3373355-3372857 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 113

Conread position: 207-494
Cow position: chrX:5304527-5304241 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 187, 31

Conread position: 224-567
Cow position: chrX:34552908-34553269 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 96

Conread position: 224-689
Cow position: chrX:4342268-4342746 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 93

Conread position: 224-689
Cow position: chrX:17782021-17782495 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 79

Conread position: 224-689
Cow position: chrX:22077823-22077345 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 20

Conread position: 225-693
Cow position: chrX:21892026-21892508 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 92

Conread position: 237-689
Cow position: chrX:18462879-18463346 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 80

Conread position: 240-478
Cow position: chrX:1528537-1528294 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 149, 91

Conread position: 248-665
Cow position: chrX:6657722-6658159 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 146, 51

Conread position: 250-677
Cow position: chrX:13654042-13654479 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 49

Conread position: 251-689
Cow position: chrX:26530518-26530968 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 66

Conread position: 251-689
Cow position: chrX:41880578-41880128 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 66

Conread position: 251-714
Cow position: chrX:23335204-23334712 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 327
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 47, 87

Conread position: 254-689
Cow position: chrX:24734216-24734659 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 63

Conread position: 256-452
Cow position: chrX:23849276-23849470 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 63

Conread position: 256-510
Cow position: chrX:44365869-44366130 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 57

Conread position: 256-689
Cow position: chrX:17523679-17523233 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 57

Conread position: 262-699
Cow position: chrX:35287002-35287430 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 289
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 11

Conread position: 264-693
Cow position: chrX:29225034-29225478 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 39

Conread position: 270-391
Cow position: chrX:22141369-22141251 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 281-681
Cow position: chrX:38588337-38587925 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 276
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 108, 33

Conread position: 283-689
Cow position: chrX:34094281-34094701 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 20

Conread position: 284-689
Cow position: chrX:9170029-9169610 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 110, 33

Conread position: 286-689
Cow position: chrX:39547981-39548394 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 287
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 108, 31

Conread position: 288-675
Cow position: chrX:20800369-20800772 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 273
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 101, 32

Conread position: 288-689
Cow position: chrX:45112387-45112796 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 276
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 116, 15

Conread position: 291-693
Cow position: chrX:11409751-11409334 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 288
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 103, 8

Conread position: 306-553
Cow position: chrX:33966389-33966141 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 24

Conread position: 307-557
Cow position: chrX:4063658-4063402 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 23

Conread position: 307-605
Cow position: chrX:4481297-4481612 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 25

Conread position: 307-605
Cow position: chrX:19541746-19541433 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 16

Conread position: 307-678
Cow position: chrX:25052316-25051936 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 129

Conread position: 307-707
Cow position: chrX:29880681-29880261 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 87, 26

Conread position: 311-689
Cow position: chrX:21658149-21658544 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 77, 18

Conread position: 311-689
Cow position: chrX:23269583-23269191 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 11

Conread position: 313-604
Cow position: chrX:46295972-46296278 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 19

Conread position: 319-467
Cow position: chrX:29859809-29859660 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 74

Conread position: 320-678
Cow position: chrX:5070951-5070585 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 181

Conread position: 322-689
Cow position: chrX:41155925-41156307 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 72, 15

Conread position: 333-647
Cow position: chrX:24928417-24928751 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 200

Conread position: 333-675
Cow position: chrX:22579754-22579404 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 194

Conread position: 333-681
Cow position: chrX:29028319-29028681 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 122

Conread position: 333-689
Cow position: chrX:8435576-8435204 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 256

Conread position: 333-689
Cow position: chrX:23974790-23974442 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 22

Conread position: 333-689
Cow position: chrX:30435996-30435623 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 200

Conread position: 333-689
Cow position: chrX:30836009-30836382 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 256

Conread position: 333-689
Cow position: chrX:30965364-30964991 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 200

Conread position: 333-723
Cow position: chrX:24032352-24031948 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 338

Conread position: 337-709
Cow position: chrX:6044820-6044438 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 253
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 226

Conread position: 338-697
Cow position: chrX:2655350-2655714 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 36

Conread position: 340-663
Cow position: chrX:21494065-21494409 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 319

Conread position: 340-689
Cow position: chrX:42223125-42222774 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 54, 196

Conread position: 342-689
Cow position: chrX:30286042-30286401 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 184

Conread position: 347-689
Cow position: chrX:18024356-18023997 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 47, 228

Conread position: 347-689
Cow position: chrX:37080878-37080520 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 186

Conread position: 350-666
Cow position: chrX:1448851-1449161 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 125

Conread position: 351-706
Cow position: chrX:2184880-2185235 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 173

Conread position: 362-693
Cow position: chrX:24345700-24346049 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 227

Conread position: 369-693
Cow position: chrX:29908544-29908202 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 206

Conread position: 386-663
Cow position: chrX:29082757-29083043 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 193

Conread position: 386-689
Cow position: chrX:38231586-38231272 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 24, 141

Conread position: 387-693
Cow position: chrX:9836594-9836915 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 200

Conread position: 390-681
Cow position: chrX:34034060-34034355 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 185

Conread position: 398-677
Cow position: chrX:37959348-37959614 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 62

Conread position: 405-690
Cow position: chrX:16301387-16301097 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 118

Conread position: 406-677
Cow position: chrX:31934327-31934049 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 108

Conread position: 415-723
Cow position: chrX:21781048-21781369 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 108

Conread position: 418-691
Cow position: chrX:30086562-30086282 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 62, 96

Conread position: 421-681
Cow position: chrX:19396950-19397220 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 258

Conread position: 427-675
Cow position: chrX:9535262-9535526 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 159

Conread position: 427-693
Cow position: chrX:24446678-24446954 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 98

Conread position: 485-678
Cow position: chrX:21190659-21190847 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 98

Show alignments to all cow chromosomes.