Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-12-1-UM.s1 |
| Conread position: | 474-673 |
| Cow position: | chr11:12354074-12353875 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 182, 155 |
| Conread position: | 481-666 |
| Cow position: | chr11:7374269-7374452 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 168, 60 |
| Conread position: | 481-674 |
| Cow position: | chr11:12763364-12763162 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 131, 161 |
| Conread position: | 481-677 |
| Cow position: | chr11:7324335-7324529 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 165, 61 |
| Conread position: | 481-677 |
| Cow position: | chr11:7380895-7381089 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 169, 60 |
| Conread position: | 481-677 |
| Cow position: | chr11:18067980-18067782 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 481-677 |
| Cow position: | chr11:35242044-35241848 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 173, 148 |
| Conread position: | 481-677 |
| Cow position: | chr11:75511367-75511167 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 481-677 |
| Cow position: | chr11:84773990-84774186 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 168, 152 |
| Conread position: | 482-674 |
| Cow position: | chr11:1493022-1492830 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 161, 147 |
| Conread position: | 482-677 |
| Cow position: | chr11:24493982-24493787 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr11:32477986-32477791 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 172, 153 |
| Conread position: | 482-677 |
| Cow position: | chr11:34638678-34638483 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr11:41261102-41260907 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr11:47973026-47972831 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr11:50510846-50510651 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 485-673 |
| Cow position: | chr11:10365557-10365379 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 166, 34 |
| Conread position: | 485-674 |
| Cow position: | chr11:58399161-58399350 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 166, 148 |
| Conread position: | 485-677 |
| Cow position: | chr11:17980462-17980271 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 169, 7 |
| Conread position: | 485-677 |
| Cow position: | chr11:21729191-21728999 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 165, 148 |
| Conread position: | 485-677 |
| Cow position: | chr11:52128038-52128230 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 169, 144 |
| Conread position: | 485-677 |
| Cow position: | chr11:73513543-73513351 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 148 |
| Conread position: | 486-673 |
| Cow position: | chr11:44875308-44875494 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 165, 73 |
| Conread position: | 486-677 |
| Cow position: | chr11:59871646-59871836 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 65 |
| Conread position: | 500-677 |
| Cow position: | chr11:35542224-35542047 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 154, 129 |
| Conread position: | 501-675 |
| Cow position: | chr11:21619984-21620159 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 511-677 |
| Cow position: | chr11:49935893-49935727 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 140, 122 |
| Conread position: | 512-677 |
| Cow position: | chr11:35142476-35142311 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 142, 117 |
Show alignments to all cow chromosomes.