Cow genome map


           Conread name:
           mA2-MI-P-A2-aex-a-12-1-UM.s1
        

               Conread position:
               457-677
               

               Cow position:
               chr19:42724856-42725070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 149
               

               Conread position:
               481-673
               

               Cow position:
               chr19:17883180-17883372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 152
               

               Conread position:
               481-677
               

               Cow position:
               chr19:46821071-46821264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               170, 71
               

               Conread position:
               481-677
               

               Cow position:
               chr19:47670125-47670321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               168, 152
               

               Conread position:
               482-677
               

               Cow position:
               chr19:35621744-35621939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               497-673
               

               Cow position:
               chr19:436107-435931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               157, 132
               

               Conread position:
               503-677
               

               Cow position:
               chr19:1663308-1663483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               14, 131
               

               Conread position:
               503-677
               

               Cow position:
               chr19:20672346-20672184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               147, 46
               

               Conread position:
               533-674
               

               Cow position:
               chr19:32952093-32952229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               559-672
               

               Cow position:
               chr19:15720581-15720467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 75
               
Show alignments to all cow chromosomes.