Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-12-1-UM.s1 |
| Conread position: | 451-673 |
| Cow position: | chr2:42668078-42667855 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 179 |
| Conread position: | 454-624 |
| Cow position: | chr2:35949769-35949599 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 155 |
| Conread position: | 454-677 |
| Cow position: | chr2:383492-383269 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 478-677 |
| Cow position: | chr2:63058698-63058895 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 173, 7 |
| Conread position: | 481-673 |
| Cow position: | chr2:28646967-28646775 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 170, 165 |
| Conread position: | 481-673 |
| Cow position: | chr2:44476829-44476638 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 173, 85 |
| Conread position: | 481-677 |
| Cow position: | chr2:15569426-15569231 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 481-677 |
| Cow position: | chr2:19288655-19288460 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 102 |
| Conread position: | 481-677 |
| Cow position: | chr2:23492452-23492648 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 170, 152 |
| Conread position: | 481-677 |
| Cow position: | chr2:31498892-31499083 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 170, 76 |
| Conread position: | 481-677 |
| Cow position: | chr2:41183678-41183874 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 152 |
| Conread position: | 481-677 |
| Cow position: | chr2:47182091-47181895 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 180, 145 |
| Conread position: | 481-677 |
| Cow position: | chr2:48360606-48360802 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 481-677 |
| Cow position: | chr2:51024505-51024327 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 170, 36 |
| Conread position: | 482-674 |
| Cow position: | chr2:18521154-18520962 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-676 |
| Cow position: | chr2:45937068-45936874 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 172, 149 |
| Conread position: | 482-677 |
| Cow position: | chr2:209440-209251 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 172, 51 |
| Conread position: | 482-677 |
| Cow position: | chr2:9962410-9962215 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 174, 164 |
| Conread position: | 482-677 |
| Cow position: | chr2:11813890-11813695 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr2:15241502-15241307 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr2:17119418-17119223 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-677 |
| Cow position: | chr2:49827878-49827683 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 177, 147 |
| Conread position: | 482-677 |
| Cow position: | chr2:58565093-58564903 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 169, 51 |
| Conread position: | 482-677 |
| Cow position: | chr2:72940094-72939899 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 156, 147 |
| Conread position: | 482-677 |
| Cow position: | chr2:84102010-84101815 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 172, 164 |
| Conread position: | 485-676 |
| Cow position: | chr2:60955295-60955484 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 170, 51 |
| Conread position: | 485-677 |
| Cow position: | chr2:63707487-63707295 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 176, 144 |
| Conread position: | 486-674 |
| Cow position: | chr2:10657178-10656995 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 163, 62 |
| Conread position: | 489-677 |
| Cow position: | chr2:32417954-32417766 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 162, 144 |
| Conread position: | 496-674 |
| Cow position: | chr2:1426969-1426797 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 155, 37 |
| Conread position: | 496-677 |
| Cow position: | chr2:20856920-20856739 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 155, 137 |
| Conread position: | 500-677 |
| Cow position: | chr2:18350720-18350543 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 161, 129 |
| Conread position: | 500-677 |
| Cow position: | chr2:43756964-43756787 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 154, 129 |
| Conread position: | 504-677 |
| Cow position: | chr2:9174328-9174155 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 147, 129 |
| Conread position: | 509-677 |
| Cow position: | chr2:67319751-67319583 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 152, 120 |
| Conread position: | 510-677 |
| Cow position: | chr2:4923346-4923178 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 520-673 |
| Cow position: | chr2:72963651-72963501 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 131, 32 |
| Conread position: | 529-677 |
| Cow position: | chr2:43047063-43046915 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 132, 100 |
| Conread position: | 539-673 |
| Cow position: | chr2:38659809-38659675 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 94 |
Show alignments to all cow chromosomes.