Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-12-1-UM.s1 |
| Conread position: | 454-676 |
| Cow position: | chr4:36669398-36669611 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 467-673 |
| Cow position: | chr4:1047434-1047227 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 180 |
| Conread position: | 481-674 |
| Cow position: | chr4:44901103-44901293 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 169, 71 |
| Conread position: | 481-676 |
| Cow position: | chr4:4086517-4086324 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 481-677 |
| Cow position: | chr4:3284513-3284317 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 170, 152 |
| Conread position: | 481-677 |
| Cow position: | chr4:4185023-4185219 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 167, 152 |
| Conread position: | 481-677 |
| Cow position: | chr4:17775924-17775728 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 481-677 |
| Cow position: | chr4:19108208-19108011 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 481-677 |
| Cow position: | chr4:27293045-27292847 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 103, 154 |
| Conread position: | 481-677 |
| Cow position: | chr4:27539511-27539704 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 161, 97 |
| Conread position: | 482-677 |
| Cow position: | chr4:27518526-27518331 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 176, 147 |
| Conread position: | 482-677 |
| Cow position: | chr4:33020786-33020591 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 172, 147 |
| Conread position: | 482-677 |
| Cow position: | chr4:44778347-44778151 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 97, 148 |
| Conread position: | 482-677 |
| Cow position: | chr4:54972896-54973091 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 172, 163 |
| Conread position: | 485-673 |
| Cow position: | chr4:34700702-34700515 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 127 |
| Conread position: | 485-676 |
| Cow position: | chr4:1239569-1239383 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 485-677 |
| Cow position: | chr4:3474525-3474717 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 164, 148 |
| Conread position: | 485-677 |
| Cow position: | chr4:66174473-66174280 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 485-677 |
| Cow position: | chr4:67600818-67600629 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 164, 7 |
| Conread position: | 500-673 |
| Cow position: | chr4:20027656-20027484 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 149, 36 |
| Conread position: | 500-675 |
| Cow position: | chr4:8560135-8559961 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 129 |
| Conread position: | 500-677 |
| Cow position: | chr4:33629168-33628991 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 161, 129 |
| Conread position: | 500-677 |
| Cow position: | chr4:62962495-62962319 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 28 |
| Conread position: | 510-677 |
| Cow position: | chr4:26745392-26745559 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 135 |
| Conread position: | 512-677 |
| Cow position: | chr4:65816780-65816618 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 140, 9 |
| Conread position: | 553-677 |
| Cow position: | chr4:19140919-19141043 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 98, 80 |
Show alignments to all cow chromosomes.