Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-12-1-UM.s1 |
| Conread position: | 31-235 |
| Cow position: | chr5:5197831-5198033 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 157, 170 |
| Conread position: | 232-459 |
| Cow position: | chr5:5198236-5198476 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 474-677 |
| Cow position: | chr5:4349050-4348847 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 179, 164 |
| Conread position: | 481-673 |
| Cow position: | chr5:3501183-3500991 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 170, 148 |
| Conread position: | 481-673 |
| Cow position: | chr5:6151887-6151695 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 173, 148 |
| Conread position: | 481-674 |
| Cow position: | chr5:34670143-34669951 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 169, 118 |
| Conread position: | 481-675 |
| Cow position: | chr5:59072099-59071905 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 173, 148 |
| Conread position: | 481-675 |
| Cow position: | chr5:62377319-62377505 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 169, 68 |
| Conread position: | 481-676 |
| Cow position: | chr5:31916570-31916761 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 481-677 |
| Cow position: | chr5:15723382-15723175 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 481-677 |
| Cow position: | chr5:21827771-21827961 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 174, 68 |
| Conread position: | 481-677 |
| Cow position: | chr5:26466585-26466779 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 481-677 |
| Cow position: | chr5:71457101-71456905 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 168, 152 |
| Conread position: | 482-672 |
| Cow position: | chr5:33775821-33775638 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 482-673 |
| Cow position: | chr5:19970086-19969895 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 169, 151 |
| Conread position: | 482-677 |
| Cow position: | chr5:4015926-4015731 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 172, 163 |
| Conread position: | 482-677 |
| Cow position: | chr5:4434558-4434363 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-677 |
| Cow position: | chr5:14942870-14942675 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr5:34683414-34683219 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 172, 147 |
| Conread position: | 482-677 |
| Cow position: | chr5:36370046-36369851 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 487-677 |
| Cow position: | chr5:72046712-72046522 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 168, 146 |
| Conread position: | 500-673 |
| Cow position: | chr5:43991247-43991419 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 503-673 |
| Cow position: | chr5:32697831-32697665 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 154, 14 |
| Conread position: | 512-677 |
| Cow position: | chr5:57336388-57336223 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 149, 117 |
| Conread position: | 520-677 |
| Cow position: | chr5:57936138-57935981 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 138 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 131, 113 |
Show alignments to all cow chromosomes.