Cow genome map
| Conread name: | mA2-MI-P-A2-aex-a-12-1-UM.s1 |
| Conread position: | 451-673 |
| Cow position: | chr6:27526910-27526687 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 477-677 |
| Cow position: | chr6:4274150-4274350 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 177, 156 |
| Conread position: | 481-667 |
| Cow position: | chr6:52978074-52977888 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 170, 152 |
| Conread position: | 481-673 |
| Cow position: | chr6:3485335-3485143 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 175, 148 |
| Conread position: | 481-673 |
| Cow position: | chr6:3893559-3893366 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 481-673 |
| Cow position: | chr6:5946691-5946499 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 173, 148 |
| Conread position: | 481-673 |
| Cow position: | chr6:34405385-34405577 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 89 |
| Conread position: | 481-673 |
| Cow position: | chr6:55539187-55538995 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 173, 148 |
| Conread position: | 481-677 |
| Cow position: | chr6:15924511-15924315 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 168, 152 |
| Conread position: | 481-677 |
| Cow position: | chr6:32286638-32286831 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 168, 145 |
| Conread position: | 481-677 |
| Cow position: | chr6:47573882-47574070 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 170, 90 |
| Conread position: | 481-677 |
| Cow position: | chr6:52249424-52249234 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 170, 75 |
| Conread position: | 482-673 |
| Cow position: | chr6:33466043-33466234 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 172, 147 |
| Conread position: | 482-677 |
| Cow position: | chr6:328278-328083 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 156, 147 |
| Conread position: | 482-677 |
| Cow position: | chr6:452178-451983 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 176, 147 |
| Conread position: | 482-677 |
| Cow position: | chr6:1498284-1498478 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 169, 54 |
| Conread position: | 482-677 |
| Cow position: | chr6:28185234-28185039 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr6:31913090-31912895 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 482-677 |
| Cow position: | chr6:53543398-53543203 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 172, 147 |
| Conread position: | 482-677 |
| Cow position: | chr6:56452010-56451815 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 179, 147 |
| Conread position: | 485-673 |
| Cow position: | chr6:6459202-6459387 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 102 |
| Conread position: | 485-676 |
| Cow position: | chr6:11193498-11193308 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 166, 58 |
| Conread position: | 485-677 |
| Cow position: | chr6:18803970-18803779 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 153, 43 |
| Conread position: | 485-677 |
| Cow position: | chr6:38438694-38438886 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 148 |
| Conread position: | 485-677 |
| Cow position: | chr6:65867872-65868064 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 163, 148 |
| Conread position: | 500-677 |
| Cow position: | chr6:40278162-40278339 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 154, 127 |
| Conread position: | 500-677 |
| Cow position: | chr6:43049092-43048915 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 161, 129 |
| Conread position: | 509-677 |
| Cow position: | chr6:6569115-6568951 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 152, 20 |
| Conread position: | 511-677 |
| Cow position: | chr6:32018998-32018835 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 525-674 |
| Cow position: | chr6:18963214-18963067 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 124, 53 |
Show alignments to all cow chromosomes.