Cow genome map
| Conread name: | mE4-MI-P-E4-ahe-h-07-1-UM.s1 |
| Conread position: | 33-320 |
| Cow position: | chr11:17273015-17273303 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 130 |
| Conread position: | 38-480 |
| Cow position: | chr11:2346404-2345963 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 38-538 |
| Cow position: | chr11:76969581-76970075 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 39-260 |
| Cow position: | chr11:10154614-10154833 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 39-309 |
| Cow position: | chr11:79098329-79098597 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 39-335 |
| Cow position: | chr11:35630395-35630100 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 140, 23 |
| Conread position: | 39-479 |
| Cow position: | chr11:66259157-66258724 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 153 |
| Conread position: | 39-501 |
| Cow position: | chr11:15988941-15988483 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 39-509 |
| Cow position: | chr11:62827125-62827587 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 294 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 194, 160 |
| Conread position: | 39-513 |
| Cow position: | chr11:9388979-9388511 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 39-530 |
| Cow position: | chr11:52248520-52248038 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 168 |
| Conread position: | 39-535 |
| Cow position: | chr11:22617301-22617794 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 57-367 |
| Cow position: | chr11:59948505-59948799 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 209, 23 |
| Conread position: | 59-512 |
| Cow position: | chr11:35240749-35240299 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 59-531 |
| Cow position: | chr11:9299143-9299625 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 153 |
| Conread position: | 59-536 |
| Cow position: | chr11:68276602-68276123 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 310 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 132, 142 |
| Conread position: | 59-538 |
| Cow position: | chr11:19440641-19441113 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 171, 94 |
| Conread position: | 61-482 |
| Cow position: | chr11:72551485-72551896 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 148, 176 |
| Conread position: | 62-427 |
| Cow position: | chr11:82558997-82558628 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 86, 197 |
| Conread position: | 63-504 |
| Cow position: | chr11:37727700-37727271 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 70-466 |
| Cow position: | chr11:29622783-29623174 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 160, 131 |
| Conread position: | 71-419 |
| Cow position: | chr11:60004436-60004088 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 292, 54 |
| Conread position: | 78-309 |
| Cow position: | chr11:40643179-40642951 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 152, 120 |
| Conread position: | 83-480 |
| Cow position: | chr11:56751729-56752121 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 88-337 |
| Cow position: | chr11:36257315-36257564 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 142, 214 |
| Conread position: | 88-535 |
| Cow position: | chr11:56418917-56419379 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 128, 166 |
| Conread position: | 89-538 |
| Cow position: | chr11:44107265-44106831 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 304 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 98-481 |
| Cow position: | chr11:11378890-11378508 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 129, 55 |
| Conread position: | 139-478 |
| Cow position: | chr11:9314285-9314624 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 62 |
| Conread position: | 139-478 |
| Cow position: | chr11:11450041-11450380 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 62 |
| Conread position: | 246-625 |
| Cow position: | chr11:6240022-6240407 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 32 |
Show alignments to all cow chromosomes.