Cow genome map
| Conread name: | mE4-MI-P-E4-ahe-h-07-1-UM.s1 |
| Conread position: | 37-514 |
| Cow position: | chr18:18493925-18494408 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 39-336 |
| Cow position: | chr18:53018988-53019285 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 172 |
| Conread position: | 39-350 |
| Cow position: | chr18:36414656-36414348 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 167 |
| Conread position: | 39-359 |
| Cow position: | chr18:42757414-42757104 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 39-430 |
| Cow position: | chr18:158591-158974 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 39-490 |
| Cow position: | chr18:28931989-28931553 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 188, 44 |
| Conread position: | 39-491 |
| Cow position: | chr18:7085579-7085127 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 39-536 |
| Cow position: | chr18:42362788-42362298 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 142 |
| Conread position: | 39-551 |
| Cow position: | chr18:51331858-51331356 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 25, 157 |
| Conread position: | 39-558 |
| Cow position: | chr18:35443348-35443864 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 335 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 41-361 |
| Cow position: | chr18:20755146-20755463 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 51-535 |
| Cow position: | chr18:12683776-12684238 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 53-480 |
| Cow position: | chr18:18248130-18247699 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 191 |
| Conread position: | 58-557 |
| Cow position: | chr18:51031711-51032204 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 150 |
| Conread position: | 59-531 |
| Cow position: | chr18:2616450-2616915 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 318 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 63-534 |
| Cow position: | chr18:34210211-34210681 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 269, 215 |
| Conread position: | 67-554 |
| Cow position: | chr18:36785326-36784861 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 81 |
| Conread position: | 74-388 |
| Cow position: | chr18:6424643-6424959 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 134 |
| Conread position: | 78-542 |
| Cow position: | chr18:43638391-43637919 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 86-542 |
| Cow position: | chr18:40840335-40840792 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 121, 175 |
| Conread position: | 87-535 |
| Cow position: | chr18:3229730-3229289 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 179, 119 |
| Conread position: | 96-483 |
| Cow position: | chr18:38086897-38087282 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 134, 29 |
| Conread position: | 102-535 |
| Cow position: | chr18:13907116-13907530 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 128, 96 |
| Conread position: | 133-501 |
| Cow position: | chr18:26642578-26642204 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 144-438 |
| Cow position: | chr18:268468-268762 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 11 |
Show alignments to all cow chromosomes.