Cow genome map
| Conread name: | mE4-MI-P-E4-ahe-h-07-1-UM.s1 |
| Conread position: | 3-535 |
| Cow position: | chr6:15155033-15154517 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 348 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 18, 138 |
| Conread position: | 17-575 |
| Cow position: | chr6:20093787-20094346 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 30-499 |
| Cow position: | chr6:35248607-35248147 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 48 |
| Conread position: | 34-538 |
| Cow position: | chr6:18666457-18666955 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 166, 18 |
| Conread position: | 38-560 |
| Cow position: | chr6:23811462-23810939 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 39-388 |
| Cow position: | chr6:16276641-16276287 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 219 |
| Conread position: | 39-436 |
| Cow position: | chr6:54080019-54079633 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 39-488 |
| Cow position: | chr6:28156363-28156814 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 164 |
| Conread position: | 39-528 |
| Cow position: | chr6:53381023-53380550 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 39-535 |
| Cow position: | chr6:827927-828416 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 39-535 |
| Cow position: | chr6:17631866-17632359 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 39-570 |
| Cow position: | chr6:6039726-6039196 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 344 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 45-557 |
| Cow position: | chr6:66952818-66953335 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 342 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 56-217 |
| Cow position: | chr6:24234087-24234246 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 58-425 |
| Cow position: | chr6:26868165-26867807 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 63-533 |
| Cow position: | chr6:2052680-2053132 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 131 |
| Conread position: | 78-557 |
| Cow position: | chr6:49380136-49380605 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 79-557 |
| Cow position: | chr6:34617030-34617496 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 83-483 |
| Cow position: | chr6:38915451-38915054 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 147, 36 |
| Conread position: | 87-510 |
| Cow position: | chr6:48473534-48473118 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 113 |
| Conread position: | 113-554 |
| Cow position: | chr6:36961634-36962065 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 296 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 118-558 |
| Cow position: | chr6:34503695-34504133 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 90 |
Show alignments to all cow chromosomes.