Cow genome map
| Conread name: | mE4-MI-P-E4-ahe-h-07-1-UM.s1 |
| Conread position: | 39-364 |
| Cow position: | chr9:49636458-49636130 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 39-388 |
| Cow position: | chr9:8461840-8462185 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 39-535 |
| Cow position: | chr9:2682318-2681826 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 39-535 |
| Cow position: | chr9:11337410-11337901 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 40-538 |
| Cow position: | chr9:1984190-1983706 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 42-337 |
| Cow position: | chr9:47944158-47943881 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 42-550 |
| Cow position: | chr9:9986105-9986599 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 324 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 99, 37 |
| Conread position: | 51-279 |
| Cow position: | chr9:18407087-18407316 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 51-376 |
| Cow position: | chr9:44372116-44372434 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 58-557 |
| Cow position: | chr9:26190468-26189973 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 253, 122 |
| Conread position: | 59-352 |
| Cow position: | chr9:16010568-16010862 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 95 |
| Conread position: | 59-504 |
| Cow position: | chr9:46237438-46237885 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 138 |
| Conread position: | 78-371 |
| Cow position: | chr9:57815789-57815498 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 131 |
| Conread position: | 78-534 |
| Cow position: | chr9:371437-371882 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 155, 113 |
| Conread position: | 78-538 |
| Cow position: | chr9:20989093-20988632 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 155, 124 |
| Conread position: | 81-558 |
| Cow position: | chr9:52753431-52753904 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 83-478 |
| Cow position: | chr9:9311280-9311670 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 150, 115 |
| Conread position: | 83-535 |
| Cow position: | chr9:56484588-56484133 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 228, 68 |
| Conread position: | 87-537 |
| Cow position: | chr9:52912433-52912867 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 308 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 73, 81 |
| Conread position: | 102-538 |
| Cow position: | chr9:52667032-52666598 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 100 |
| Conread position: | 113-599 |
| Cow position: | chr9:39215387-39214905 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 248, 90 |
| Conread position: | 135-558 |
| Cow position: | chr9:29082825-29083249 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 142-481 |
| Cow position: | chr9:44218578-44218232 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 169-501 |
| Cow position: | chr9:28786049-28785716 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 32, 39 |
Show alignments to all cow chromosomes.