Cow genome map

Conread name: rcbe26_b12.y1

Conread position: 1-220
Cow position: chr10:3698105-3698331 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 188

Conread position: 1-221
Cow position: chr10:4310868-4311096 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 30

Conread position: 1-254
Cow position: chr10:9082976-9083237 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 195

Conread position: 1-254
Cow position: chr10:22048928-22049200 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 32, 25

Conread position: 1-254
Cow position: chr10:58718329-58718583 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 149

Conread position: 1-255
Cow position: chr10:888606-888866 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 25

Conread position: 1-255
Cow position: chr10:50016312-50016072 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 24

Conread position: 1-255
Cow position: chr10:61588582-61588321 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 191

Conread position: 1-259
Cow position: chr10:48462663-48462393 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 44

Conread position: 1-260
Cow position: chr10:40106794-40107050 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 70

Conread position: 1-264
Cow position: chr10:65132636-65132909 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-265
Cow position: chr10:50200381-50200665 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 134

Conread position: 4-253
Cow position: chr10:29628273-29628011 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 209

Conread position: 5-252
Cow position: chr10:16598370-16598620 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 176

Conread position: 6-251
Cow position: chr10:5543568-5543311 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 53, 193

Conread position: 7-215
Cow position: chr10:15889173-15889384 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 103

Conread position: 7-221
Cow position: chr10:22321210-22321431 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 52

Conread position: 7-247
Cow position: chr10:46491346-46491106 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 29, 15

Conread position: 7-253
Cow position: chr10:28105378-28105144 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 151, 25

Conread position: 7-255
Cow position: chr10:20132843-20132585 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 19

Conread position: 7-255
Cow position: chr10:21448212-21447965 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 168

Conread position: 7-255
Cow position: chr10:29211641-29211899 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 206

Conread position: 7-255
Cow position: chr10:54948438-54948194 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 130, 50

Conread position: 7-259
Cow position: chr10:9287752-9287997 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 18

Conread position: 7-259
Cow position: chr10:17175716-17175980 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 7-259
Cow position: chr10:48377949-48377696 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 33

Conread position: 7-265
Cow position: chr10:10721001-10720722 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 195

Conread position: 7-265
Cow position: chr10:19104499-19104221 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 264

Conread position: 7-265
Cow position: chr10:30456167-30455899 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 18

Conread position: 7-266
Cow position: chr10:6986131-6986399 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 5

Conread position: 7-266
Cow position: chr10:37528924-37528653 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 164

Conread position: 7-272
Cow position: chr10:11487292-11487031 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 20

Conread position: 8-247
Cow position: chr10:804878-805129 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 169

Conread position: 8-250
Cow position: chr10:49045528-49045779 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 8-255
Cow position: chr10:3998594-3998844 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 138, 27

Conread position: 8-266
Cow position: chr10:51306010-51306293 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 64

Conread position: 10-261
Cow position: chr10:64876207-64876463 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 15

Conread position: 11-244
Cow position: chr10:33915364-33915134 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 48, 144

Conread position: 12-247
Cow position: chr10:23886757-23886527 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 119, 64

Conread position: 12-258
Cow position: chr10:21082084-21082328 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 18

Conread position: 16-250
Cow position: chr10:5607336-5607579 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 27

Conread position: 17-247
Cow position: chr10:46829568-46829809 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 0

Conread position: 21-259
Cow position: chr10:9445313-9445069 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 122, 173

Conread position: 23-212
Cow position: chr10:28835930-28836120 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 36, 48

Conread position: 23-247
Cow position: chr10:8077453-8077214 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 192

Conread position: 24-228
Cow position: chr10:15353624-15353415 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 142

Conread position: 32-258
Cow position: chr10:17982897-17983129 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 114, 25

Conread position: 32-259
Cow position: chr10:15292980-15293212 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 64

Conread position: 32-259
Cow position: chr10:24785813-24786050 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 110

Conread position: 32-259
Cow position: chr10:49038266-49038524 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 32-259
Cow position: chr10:60032869-60032627 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 41

Conread position: 33-252
Cow position: chr10:29920122-29919896 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 63

Conread position: 33-254
Cow position: chr10:28933451-28933682 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 74

Conread position: 33-258
Cow position: chr10:59664255-59664033 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 72

Conread position: 34-236
Cow position: chr10:39646389-39646181 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 13

Conread position: 35-259
Cow position: chr10:13311443-13311676 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 151

Conread position: 35-259
Cow position: chr10:20505253-20505484 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 42

Conread position: 35-259
Cow position: chr10:31266612-31266388 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 123, 22

Conread position: 35-259
Cow position: chr10:43438581-43438819 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 35-267
Cow position: chr10:29360619-29360861 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 134

Conread position: 36-259
Cow position: chr10:41255700-41255929 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 20, 50

Conread position: 37-250
Cow position: chr10:9798480-9798262 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 22, 142

Conread position: 37-259
Cow position: chr10:15318604-15318828 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 25, 12

Conread position: 39-180
Cow position: chr10:2407393-2407249 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 32

Conread position: 39-255
Cow position: chr10:57461081-57461295 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 80

Conread position: 39-260
Cow position: chr10:42745628-42745863 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 133

Conread position: 41-247
Cow position: chr10:24752875-24753082 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 147

Conread position: 44-265
Cow position: chr10:29279165-29279392 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 39

Conread position: 45-261
Cow position: chr10:58690627-58690838 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 103

Conread position: 49-253
Cow position: chr10:49456349-49456149 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 100

Conread position: 50-259
Cow position: chr10:32417095-32417298 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 18

Conread position: 57-260
Cow position: chr10:52113929-52113725 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 74, 125

Conread position: 57-261
Cow position: chr10:43288133-43287921 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 93, 0

Conread position: 57-264
Cow position: chr10:8169994-8170198 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 76, 91

Conread position: 57-266
Cow position: chr10:48388535-48388320 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 136

Conread position: 58-221
Cow position: chr10:20997539-20997369 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 17

Conread position: 59-265
Cow position: chr10:63276129-63276343 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 61-265
Cow position: chr10:6173100-6173307 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 118

Conread position: 61-266
Cow position: chr10:35791673-35791882 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 78, 126

Conread position: 64-247
Cow position: chr10:36489762-36489951 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 64-260
Cow position: chr10:2462735-2462540 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 64-266
Cow position: chr10:22341308-22341519 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 125

Conread position: 65-259
Cow position: chr10:43508739-43508936 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 52

Conread position: 71-259
Cow position: chr10:22396005-22396196 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 113

Conread position: 75-270
Cow position: chr10:32030070-32029878 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 59

Conread position: 88-255
Cow position: chr10:38512941-38513115 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 93

Conread position: 95-253
Cow position: chr10:46493229-46493059 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 110-266
Cow position: chr10:37534400-37534551 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 36

Conread position: 129-259
Cow position: chr10:4484480-4484612 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 56

Conread position: 140-259
Cow position: chr10:4164093-4164212 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 34

Show alignments to all cow chromosomes.