Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-245 |
| Cow position: | chr12:2512191-2512443 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 92, 58 |
| Conread position: | 1-254 |
| Cow position: | chr12:6226968-6226725 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 131, 66 |
| Conread position: | 1-258 |
| Cow position: | chr12:7000941-7000675 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 40, 139 |
| Conread position: | 1-258 |
| Cow position: | chr12:28650616-28650884 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 1-259 |
| Cow position: | chr12:8869221-8868947 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 1-265 |
| Cow position: | chr12:22516073-22515800 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 1-266 |
| Cow position: | chr12:2286243-2286524 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 196 |
| Conread position: | 1-266 |
| Cow position: | chr12:3568613-3568881 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 1-266 |
| Cow position: | chr12:9710542-9710272 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 4-255 |
| Cow position: | chr12:24440478-24440744 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 193 |
| Conread position: | 5-259 |
| Cow position: | chr12:5800705-5800963 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 123, 182 |
| Conread position: | 6-255 |
| Cow position: | chr12:12017545-12017804 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 7-247 |
| Cow position: | chr12:34385845-34385595 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 186 |
| Conread position: | 7-255 |
| Cow position: | chr12:31959562-31959813 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 52, 156 |
| Conread position: | 7-255 |
| Cow position: | chr12:42254330-42254593 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 7-256 |
| Cow position: | chr12:40158567-40158311 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 7-258 |
| Cow position: | chr12:19872110-19872354 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 7-258 |
| Cow position: | chr12:42181469-42181209 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 7-259 |
| Cow position: | chr12:9414097-9413852 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 7-259 |
| Cow position: | chr12:30753395-30753653 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 7-265 |
| Cow position: | chr12:19865911-19866178 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 7-272 |
| Cow position: | chr12:34466327-34466064 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 177, 16 |
| Conread position: | 11-258 |
| Cow position: | chr12:34473935-34473695 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 13-198 |
| Cow position: | chr12:35136194-35136391 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 150 |
| Conread position: | 13-245 |
| Cow position: | chr12:31228254-31228490 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 126, 40 |
| Conread position: | 23-252 |
| Cow position: | chr12:36568366-36568137 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 27-259 |
| Cow position: | chr12:30805543-30805784 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 5, 142 |
| Conread position: | 28-259 |
| Cow position: | chr12:18518361-18518595 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 161 |
| Conread position: | 31-259 |
| Cow position: | chr12:33457843-33458075 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 32-255 |
| Cow position: | chr12:30590471-30590693 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 33-252 |
| Cow position: | chr12:36012913-36012693 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 33-265 |
| Cow position: | chr12:6720017-6720259 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 33-270 |
| Cow position: | chr12:17031316-17031556 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 35-259 |
| Cow position: | chr12:37994028-37993793 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 37-259 |
| Cow position: | chr12:6411029-6410804 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 149 |
| Conread position: | 39-258 |
| Cow position: | chr12:3510266-3510492 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 40-255 |
| Cow position: | chr12:29694335-29694120 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 40-255 |
| Cow position: | chr12:40270384-40270166 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 43-250 |
| Cow position: | chr12:31532696-31532489 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 92, 121 |
| Conread position: | 43-266 |
| Cow position: | chr12:9914494-9914726 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 44-264 |
| Cow position: | chr12:3950645-3950412 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 155 |
| Conread position: | 57-253 |
| Cow position: | chr12:22047192-22047395 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 66-258 |
| Cow position: | chr12:24107806-24107616 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 70-252 |
| Cow position: | chr12:42283102-42282910 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 72-255 |
| Cow position: | chr12:3994686-3994882 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 77-253 |
| Cow position: | chr12:43351582-43351759 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 109 |
| Conread position: | 130-252 |
| Cow position: | chr12:28748739-28748863 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 135-259 |
| Cow position: | chr12:3906278-3906403 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 53 |
Show alignments to all cow chromosomes.