Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-246 |
| Cow position: | chr13:20378057-20378306 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 56 |
| Conread position: | 1-251 |
| Cow position: | chr13:9974782-9975051 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 201 |
| Conread position: | 1-253 |
| Cow position: | chr13:60974359-60974105 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 182 |
| Conread position: | 1-255 |
| Cow position: | chr13:3003728-3003462 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 1-255 |
| Cow position: | chr13:30651459-30651199 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 1-259 |
| Cow position: | chr13:12546623-12546892 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 195 |
| Conread position: | 1-260 |
| Cow position: | chr13:21276139-21275873 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 190 |
| Conread position: | 1-268 |
| Cow position: | chr13:27524978-27525259 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 63, 185 |
| Conread position: | 4-253 |
| Cow position: | chr13:562856-563119 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 49, 180 |
| Conread position: | 4-255 |
| Cow position: | chr13:2774399-2774148 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 4-259 |
| Cow position: | chr13:5091380-5091649 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 55, 192 |
| Conread position: | 4-260 |
| Cow position: | chr13:60967045-60966783 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 211 |
| Conread position: | 4-264 |
| Cow position: | chr13:60690438-60690715 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 194 |
| Conread position: | 4-265 |
| Cow position: | chr13:20879556-20879813 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 4-265 |
| Cow position: | chr13:37981471-37981734 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 146 |
| Conread position: | 6-216 |
| Cow position: | chr13:60436604-60436826 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 7-172 |
| Cow position: | chr13:22076354-22076185 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-175 |
| Cow position: | chr13:10928715-10928893 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 7-221 |
| Cow position: | chr13:43138951-43139172 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 133, 64 |
| Conread position: | 7-252 |
| Cow position: | chr13:6606742-6606999 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 190 |
| Conread position: | 7-255 |
| Cow position: | chr13:8362468-8362727 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 213 |
| Conread position: | 7-255 |
| Cow position: | chr13:12448710-12448974 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 7-255 |
| Cow position: | chr13:15869395-15869143 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 7-255 |
| Cow position: | chr13:32017245-32017505 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 63 |
| Conread position: | 7-255 |
| Cow position: | chr13:46182053-46181812 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 7-258 |
| Cow position: | chr13:1231928-1231663 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 7-258 |
| Cow position: | chr13:26479939-26480195 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 7-259 |
| Cow position: | chr13:10988796-10989059 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 124, 61 |
| Conread position: | 7-259 |
| Cow position: | chr13:20666110-20666367 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 7-259 |
| Cow position: | chr13:21039325-21039584 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 7-259 |
| Cow position: | chr13:25434851-25435103 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 141 |
| Conread position: | 7-265 |
| Cow position: | chr13:5752145-5752415 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 186 |
| Conread position: | 7-266 |
| Cow position: | chr13:1042678-1042955 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 269 |
| Conread position: | 7-266 |
| Cow position: | chr13:25531512-25531777 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 7-266 |
| Cow position: | chr13:37945942-37946197 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 50 |
| Conread position: | 8-263 |
| Cow position: | chr13:6616471-6616738 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 176 |
| Conread position: | 9-253 |
| Cow position: | chr13:6079143-6079395 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 50, 174 |
| Conread position: | 12-255 |
| Cow position: | chr13:41154780-41155011 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 19-255 |
| Cow position: | chr13:15041206-15041453 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 176 |
| Conread position: | 23-253 |
| Cow position: | chr13:11260515-11260293 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 32-255 |
| Cow position: | chr13:26261541-26261778 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 164 |
| Conread position: | 32-265 |
| Cow position: | chr13:20649734-20649974 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 33-220 |
| Cow position: | chr13:23479281-23479083 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 29, 152 |
| Conread position: | 33-250 |
| Cow position: | chr13:3315421-3315652 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 144 |
| Conread position: | 33-254 |
| Cow position: | chr13:48251740-48251964 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 33-259 |
| Cow position: | chr13:4664609-4664849 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 36-259 |
| Cow position: | chr13:38012610-38012374 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 162 |
| Conread position: | 37-266 |
| Cow position: | chr13:8201237-8201472 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 40-258 |
| Cow position: | chr13:5278943-5279169 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 149 |
| Conread position: | 40-259 |
| Cow position: | chr13:16024833-16024607 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 44-260 |
| Cow position: | chr13:2462991-2463217 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 6 |
| Conread position: | 44-265 |
| Cow position: | chr13:10924665-10924903 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 45-255 |
| Cow position: | chr13:2339669-2339455 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 161 |
| Conread position: | 49-260 |
| Cow position: | chr13:54093973-54093760 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 113 |
| Conread position: | 50-253 |
| Cow position: | chr13:43184640-43184849 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 50-255 |
| Cow position: | chr13:47963969-47964174 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 91, 59 |
| Conread position: | 50-289 |
| Cow position: | chr13:34556100-34556353 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 51-255 |
| Cow position: | chr13:13176880-13176672 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 134 |
| Conread position: | 52-273 |
| Cow position: | chr13:20530913-20531144 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 57-258 |
| Cow position: | chr13:15192669-15192872 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 84, 126 |
| Conread position: | 57-266 |
| Cow position: | chr13:12207268-12207054 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 58-254 |
| Cow position: | chr13:20839792-20839585 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 6, 136 |
| Conread position: | 61-273 |
| Cow position: | chr13:30026333-30026114 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 76-259 |
| Cow position: | chr13:46112173-46111983 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 82-259 |
| Cow position: | chr13:24230413-24230226 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 82-266 |
| Cow position: | chr13:52749288-52749468 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 85-259 |
| Cow position: | chr13:23512556-23512384 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 87-265 |
| Cow position: | chr13:8652242-8652426 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 91-258 |
| Cow position: | chr13:15991031-15991213 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 93-253 |
| Cow position: | chr13:14771650-14771478 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 101-273 |
| Cow position: | chr13:5758164-5758337 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 121-260 |
| Cow position: | chr13:4420503-4420360 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.