Cow genome map

Conread name: rcbe26_b12.y1

Conread position: 1-255
Cow position: chr15:53164407-53164147 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 182

Conread position: 1-259
Cow position: chr15:47990374-47990645 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 195

Conread position: 4-253
Cow position: chr15:22168448-22168184 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 194

Conread position: 4-265
Cow position: chr15:36621804-36621526 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-259
Cow position: chr15:28126665-28126926 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 150

Conread position: 7-175
Cow position: chr15:26078988-26079160 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 114

Conread position: 7-244
Cow position: chr15:43030640-43030892 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 52, 91

Conread position: 7-255
Cow position: chr15:5234623-5234877 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 186

Conread position: 7-255
Cow position: chr15:24616945-24616696 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 151, 50

Conread position: 7-255
Cow position: chr15:38806117-38806379 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 134, 52

Conread position: 7-255
Cow position: chr15:52482447-52482702 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 177

Conread position: 7-258
Cow position: chr15:51632663-51632916 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 52, 135

Conread position: 7-259
Cow position: chr15:5536131-5535877 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 61

Conread position: 7-259
Cow position: chr15:43626840-43626588 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 21

Conread position: 7-266
Cow position: chr15:1329724-1329989 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 26

Conread position: 7-266
Cow position: chr15:53680388-53680650 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 36

Conread position: 7-289
Cow position: chr15:33662876-33662583 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 52, 216

Conread position: 8-262
Cow position: chr15:7827655-7827920 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 185

Conread position: 9-255
Cow position: chr15:22938956-22939198 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 51

Conread position: 9-266
Cow position: chr15:20370090-20370344 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 16

Conread position: 10-260
Cow position: chr15:6331682-6331917 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 21

Conread position: 11-237
Cow position: chr15:22751826-22751593 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 10

Conread position: 13-255
Cow position: chr15:9871035-9871289 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 20

Conread position: 17-247
Cow position: chr15:32204531-32204767 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 162

Conread position: 19-258
Cow position: chr15:24941016-24941254 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 109

Conread position: 20-253
Cow position: chr15:20725248-20725491 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 32, 57

Conread position: 27-259
Cow position: chr15:38846459-38846224 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 5, 129

Conread position: 31-266
Cow position: chr15:14856126-14856353 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 127, 26

Conread position: 32-255
Cow position: chr15:40009293-40009526 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 27, 159

Conread position: 32-259
Cow position: chr15:1298093-1297859 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 39

Conread position: 33-251
Cow position: chr15:38883513-38883280 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 163

Conread position: 33-258
Cow position: chr15:23767909-23768137 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 158

Conread position: 33-259
Cow position: chr15:4535263-4535031 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 154

Conread position: 33-266
Cow position: chr15:12316282-12316040 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 159

Conread position: 33-266
Cow position: chr15:30820479-30820723 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 218

Conread position: 40-244
Cow position: chr15:11658216-11658433 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 147

Conread position: 40-255
Cow position: chr15:31857938-31857713 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 151

Conread position: 40-264
Cow position: chr15:6462153-6462382 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 124

Conread position: 41-211
Cow position: chr15:12063678-12063496 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 49-259
Cow position: chr15:47822136-47821930 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 32

Conread position: 50-252
Cow position: chr15:10245673-10245877 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 21

Conread position: 50-255
Cow position: chr15:39621674-39621465 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 102, 75

Conread position: 57-253
Cow position: chr15:21894111-21893908 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 84, 150

Conread position: 57-255
Cow position: chr15:5633001-5632807 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 114

Conread position: 58-255
Cow position: chr15:36787636-36787449 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 59-255
Cow position: chr15:38394747-38394543 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 83, 199

Conread position: 60-265
Cow position: chr15:26903520-26903309 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 143

Conread position: 61-265
Cow position: chr15:50322920-50322710 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 126

Conread position: 72-259
Cow position: chr15:10846036-10845840 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 87-255
Cow position: chr15:11646190-11646363 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 18

Conread position: 87-261
Cow position: chr15:37777650-37777473 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 7

Conread position: 89-255
Cow position: chr15:1804031-1804211 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 93-264
Cow position: chr15:34144862-34145040 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 95

Show alignments to all cow chromosomes.