Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-255 |
| Cow position: | chr15:53164407-53164147 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 135, 182 |
| Conread position: | 1-259 |
| Cow position: | chr15:47990374-47990645 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 195 |
| Conread position: | 4-253 |
| Cow position: | chr15:22168448-22168184 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 194 |
| Conread position: | 4-265 |
| Cow position: | chr15:36621804-36621526 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 5-259 |
| Cow position: | chr15:28126665-28126926 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 54, 150 |
| Conread position: | 7-175 |
| Cow position: | chr15:26078988-26079160 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 7-244 |
| Cow position: | chr15:43030640-43030892 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 52, 91 |
| Conread position: | 7-255 |
| Cow position: | chr15:5234623-5234877 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 186 |
| Conread position: | 7-255 |
| Cow position: | chr15:24616945-24616696 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 151, 50 |
| Conread position: | 7-255 |
| Cow position: | chr15:38806117-38806379 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 134, 52 |
| Conread position: | 7-255 |
| Cow position: | chr15:52482447-52482702 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 177 |
| Conread position: | 7-258 |
| Cow position: | chr15:51632663-51632916 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 52, 135 |
| Conread position: | 7-259 |
| Cow position: | chr15:5536131-5535877 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 7-259 |
| Cow position: | chr15:43626840-43626588 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 7-266 |
| Cow position: | chr15:1329724-1329989 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 7-266 |
| Cow position: | chr15:53680388-53680650 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 7-289 |
| Cow position: | chr15:33662876-33662583 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 52, 216 |
| Conread position: | 8-262 |
| Cow position: | chr15:7827655-7827920 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 9-255 |
| Cow position: | chr15:22938956-22939198 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 9-266 |
| Cow position: | chr15:20370090-20370344 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 16 |
| Conread position: | 10-260 |
| Cow position: | chr15:6331682-6331917 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 11-237 |
| Cow position: | chr15:22751826-22751593 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 13-255 |
| Cow position: | chr15:9871035-9871289 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 17-247 |
| Cow position: | chr15:32204531-32204767 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 162 |
| Conread position: | 19-258 |
| Cow position: | chr15:24941016-24941254 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 20-253 |
| Cow position: | chr15:20725248-20725491 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 27-259 |
| Cow position: | chr15:38846459-38846224 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 5, 129 |
| Conread position: | 31-266 |
| Cow position: | chr15:14856126-14856353 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 127, 26 |
| Conread position: | 32-255 |
| Cow position: | chr15:40009293-40009526 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 27, 159 |
| Conread position: | 32-259 |
| Cow position: | chr15:1298093-1297859 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 33-251 |
| Cow position: | chr15:38883513-38883280 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 163 |
| Conread position: | 33-258 |
| Cow position: | chr15:23767909-23768137 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 33-259 |
| Cow position: | chr15:4535263-4535031 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 33-266 |
| Cow position: | chr15:12316282-12316040 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 10, 159 |
| Conread position: | 33-266 |
| Cow position: | chr15:30820479-30820723 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 25, 218 |
| Conread position: | 40-244 |
| Cow position: | chr15:11658216-11658433 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 147 |
| Conread position: | 40-255 |
| Cow position: | chr15:31857938-31857713 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 101, 151 |
| Conread position: | 40-264 |
| Cow position: | chr15:6462153-6462382 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 41-211 |
| Cow position: | chr15:12063678-12063496 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 49-259 |
| Cow position: | chr15:47822136-47821930 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 50-252 |
| Cow position: | chr15:10245673-10245877 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 50-255 |
| Cow position: | chr15:39621674-39621465 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 57-253 |
| Cow position: | chr15:21894111-21893908 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 57-255 |
| Cow position: | chr15:5633001-5632807 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 101, 114 |
| Conread position: | 58-255 |
| Cow position: | chr15:36787636-36787449 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 59-255 |
| Cow position: | chr15:38394747-38394543 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 83, 199 |
| Conread position: | 60-265 |
| Cow position: | chr15:26903520-26903309 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 143 |
| Conread position: | 61-265 |
| Cow position: | chr15:50322920-50322710 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 126 |
| Conread position: | 72-259 |
| Cow position: | chr15:10846036-10845840 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 87-255 |
| Cow position: | chr15:11646190-11646363 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 87-261 |
| Cow position: | chr15:37777650-37777473 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 89-255 |
| Cow position: | chr15:1804031-1804211 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 93-264 |
| Cow position: | chr15:34144862-34145040 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 95 |
Show alignments to all cow chromosomes.