Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-218 |
| Cow position: | chr16:42073259-42073039 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 162 |
| Conread position: | 1-221 |
| Cow position: | chr16:11425439-11425207 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 210 |
| Conread position: | 1-253 |
| Cow position: | chr16:28833543-28833799 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 58, 187 |
| Conread position: | 1-254 |
| Cow position: | chr16:40561927-40562193 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 187 |
| Conread position: | 1-258 |
| Cow position: | chr16:13791206-13791483 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 193 |
| Conread position: | 1-259 |
| Cow position: | chr16:53554011-53553748 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 1-261 |
| Cow position: | chr16:39646261-39646515 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 1-263 |
| Cow position: | chr16:42253869-42253593 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 67 |
| Conread position: | 1-265 |
| Cow position: | chr16:7665328-7665610 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 199 |
| Conread position: | 1-265 |
| Cow position: | chr16:33226831-33226566 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 58, 176 |
| Conread position: | 4-251 |
| Cow position: | chr16:52855312-52855063 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 4-254 |
| Cow position: | chr16:51400044-51399782 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 41, 188 |
| Conread position: | 4-259 |
| Cow position: | chr16:13307158-13306899 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 4-259 |
| Cow position: | chr16:18141622-18141360 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 4-266 |
| Cow position: | chr16:7541995-7542262 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 60, 148 |
| Conread position: | 4-273 |
| Cow position: | chr16:25965213-25965485 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 5-258 |
| Cow position: | chr16:33299098-33299362 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 5-258 |
| Cow position: | chr16:51113171-51112909 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 186 |
| Conread position: | 7-221 |
| Cow position: | chr16:39616451-39616673 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-247 |
| Cow position: | chr16:56150020-56150257 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 7-255 |
| Cow position: | chr16:4399431-4399701 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 7-258 |
| Cow position: | chr16:5725187-5725431 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 151, 28 |
| Conread position: | 7-259 |
| Cow position: | chr16:15408165-15407918 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 51, 141 |
| Conread position: | 7-259 |
| Cow position: | chr16:31159864-31159603 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 136, 36 |
| Conread position: | 7-259 |
| Cow position: | chr16:50189881-50189621 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 7-264 |
| Cow position: | chr16:53627713-53627454 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 7-265 |
| Cow position: | chr16:4910821-4910552 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 8-219 |
| Cow position: | chr16:52789770-52789986 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 50, 189 |
| Conread position: | 8-253 |
| Cow position: | chr16:28922497-28922747 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 9-247 |
| Cow position: | chr16:23990777-23990526 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 11-253 |
| Cow position: | chr16:55042842-55042594 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 11-255 |
| Cow position: | chr16:13698219-13698477 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 188 |
| Conread position: | 11-258 |
| Cow position: | chr16:16402617-16402353 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 23, 202 |
| Conread position: | 11-261 |
| Cow position: | chr16:2223695-2223431 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 12-258 |
| Cow position: | chr16:30939449-30939702 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 12-260 |
| Cow position: | chr16:7456754-7456488 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 177 |
| Conread position: | 16-259 |
| Cow position: | chr16:3246476-3246238 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 23-264 |
| Cow position: | chr16:37379990-37380241 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 33, 150 |
| Conread position: | 24-259 |
| Cow position: | chr16:30209487-30209724 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 26-255 |
| Cow position: | chr16:25287964-25287723 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 174 |
| Conread position: | 27-236 |
| Cow position: | chr16:20476259-20476483 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 29-259 |
| Cow position: | chr16:11008079-11008312 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 31-259 |
| Cow position: | chr16:24672628-24672388 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 32-253 |
| Cow position: | chr16:44744400-44744171 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 27, 86 |
| Conread position: | 32-255 |
| Cow position: | chr16:14758471-14758698 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 33-248 |
| Cow position: | chr16:23025079-23025303 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 33-260 |
| Cow position: | chr16:53613032-53613273 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 33-266 |
| Cow position: | chr16:18205704-18205936 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 34-274 |
| Cow position: | chr16:37669994-37669755 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 35-254 |
| Cow position: | chr16:13969642-13969409 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 229 |
| Conread position: | 35-258 |
| Cow position: | chr16:17745569-17745801 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 146 |
| Conread position: | 41-260 |
| Cow position: | chr16:20025185-20025416 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 50-215 |
| Cow position: | chr16:9728957-9729131 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 50-252 |
| Cow position: | chr16:38905473-38905268 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 98, 137 |
| Conread position: | 50-255 |
| Cow position: | chr16:42633995-42633786 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 82, 100 |
| Conread position: | 50-265 |
| Cow position: | chr16:47620133-47620357 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 96, 138 |
| Conread position: | 50-265 |
| Cow position: | chr16:56522719-56522498 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 56-255 |
| Cow position: | chr16:53048310-53048519 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 57-260 |
| Cow position: | chr16:7152414-7152202 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 12, 134 |
| Conread position: | 57-261 |
| Cow position: | chr16:23810682-23810883 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 73 |
| Conread position: | 59-258 |
| Cow position: | chr16:51246725-51246915 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 99, 60 |
| Conread position: | 61-255 |
| Cow position: | chr16:37452850-37452651 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 61-260 |
| Cow position: | chr16:29037680-29037881 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 80-266 |
| Cow position: | chr16:28692927-28692746 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 88-253 |
| Cow position: | chr16:9615444-9615274 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 91-255 |
| Cow position: | chr16:10462723-10462558 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 52, 100 |
| Conread position: | 93-258 |
| Cow position: | chr16:17982348-17982174 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 121-273 |
| Cow position: | chr16:34153745-34153585 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 135-255 |
| Cow position: | chr16:3821381-3821503 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 117 |
Show alignments to all cow chromosomes.