Cow genome map
| Conread name: | rcbe26_b12.y1 |
| Conread position: | 1-255 |
| Cow position: | chr17:26182964-26183228 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-259 |
| Cow position: | chr17:9565054-9565317 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 189 |
| Conread position: | 4-260 |
| Cow position: | chr17:18720699-18720439 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 4-265 |
| Cow position: | chr17:8079062-8079330 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 7-174 |
| Cow position: | chr17:17059188-17059358 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-253 |
| Cow position: | chr17:25189031-25189291 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 7-255 |
| Cow position: | chr17:1653940-1653686 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 7-255 |
| Cow position: | chr17:20889123-20889380 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 57, 203 |
| Conread position: | 7-255 |
| Cow position: | chr17:21959931-21959681 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 7-255 |
| Cow position: | chr17:26230687-26230956 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-258 |
| Cow position: | chr17:9853734-9853995 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 188 |
| Conread position: | 7-258 |
| Cow position: | chr17:24549918-24550185 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-259 |
| Cow position: | chr17:5041930-5041672 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 7-259 |
| Cow position: | chr17:11216132-11215882 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 7-260 |
| Cow position: | chr17:20233975-20234239 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 54, 186 |
| Conread position: | 7-260 |
| Cow position: | chr17:33271925-33271672 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 7-266 |
| Cow position: | chr17:14033899-14033624 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 189 |
| Conread position: | 7-273 |
| Cow position: | chr17:4612328-4612056 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 7-273 |
| Cow position: | chr17:20993292-20993016 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 10-255 |
| Cow position: | chr17:25740701-25740958 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 194 |
| Conread position: | 11-255 |
| Cow position: | chr17:9117395-9117652 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 48, 172 |
| Conread position: | 13-253 |
| Cow position: | chr17:16371004-16371260 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 14-255 |
| Cow position: | chr17:11102039-11101795 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 23-247 |
| Cow position: | chr17:15300106-15299877 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 24-259 |
| Cow position: | chr17:14848757-14848534 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 24-260 |
| Cow position: | chr17:30665039-30665282 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 27-259 |
| Cow position: | chr17:27047931-27048167 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 32-245 |
| Cow position: | chr17:34316935-34316713 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 32-259 |
| Cow position: | chr17:7132682-7132441 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 163 |
| Conread position: | 32-266 |
| Cow position: | chr17:35126487-35126724 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 100 |
| Conread position: | 32-273 |
| Cow position: | chr17:17410071-17410314 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 33-252 |
| Cow position: | chr17:9778025-9778250 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 145 |
| Conread position: | 33-255 |
| Cow position: | chr17:21313027-21312805 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 39-255 |
| Cow position: | chr17:5246680-5246897 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 41-258 |
| Cow position: | chr17:21739102-21738867 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 43-258 |
| Cow position: | chr17:25097247-25097471 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 50-259 |
| Cow position: | chr17:1035810-1035588 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 50-259 |
| Cow position: | chr17:20912692-20912894 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 58-247 |
| Cow position: | chr17:32279105-32278908 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 59-252 |
| Cow position: | chr17:5514562-5514762 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 60-258 |
| Cow position: | chr17:35311225-35311435 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 152 |
| Conread position: | 61-175 |
| Cow position: | chr17:20072270-20072155 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 61-255 |
| Cow position: | chr17:4436426-4436227 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 118 |
| Conread position: | 81-265 |
| Cow position: | chr17:10459111-10458923 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 89-255 |
| Cow position: | chr17:38363141-38362981 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 57 |
| Conread position: | 106-246 |
| Cow position: | chr17:24559149-24559290 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 78 |
| Conread position: | 141-260 |
| Cow position: | chr17:9936146-9936029 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 41 |
Show alignments to all cow chromosomes.